Result of FASTA (omim) for pF1KB6727
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6727, 92 aa
  1>>>pF1KB6727 92 - 92 aa - 92 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.2491+/-0.000294; mu= 14.4018+/- 0.018
 mean_var=53.7073+/-10.867, 0's: 0 Z-trim(118.0): 42  B-trim: 740 in 1/48
 Lambda= 0.175008
 statistics sampled from 30367 (30430) to 30367 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.357), width:  16
 Scan time:  3.650

The best scores are:                                      opt bits E(85289)
XP_016882363 (OMIM: 602359) PREDICTED: phospholemm (  92)  608 160.4 3.8e-40
NP_068702 (OMIM: 602359) phospholemman precursor [ (  92)  608 160.4 3.8e-40
NP_005022 (OMIM: 602359) phospholemman precursor [ (  92)  608 160.4 3.8e-40
NP_001265646 (OMIM: 602359) phospholemman precurso (  92)  608 160.4 3.8e-40
NP_001265647 (OMIM: 602359) phospholemman precurso (  92)  608 160.4 3.8e-40
XP_016882364 (OMIM: 602359) PREDICTED: phospholemm ( 110)  608 160.5 4.3e-40
XP_016882365 (OMIM: 602359) PREDICTED: phospholemm ( 110)  608 160.5 4.3e-40
NP_001158303 (OMIM: 606683) FXYD domain-containing (  95)  258 72.0 1.5e-13
NP_071286 (OMIM: 606683) FXYD domain-containing io (  95)  258 72.0 1.5e-13
NP_001158304 (OMIM: 606683) FXYD domain-containing (  95)  258 72.0 1.5e-13
NP_001158308 (OMIM: 606683) FXYD domain-containing (  95)  258 72.0 1.5e-13
NP_001158309 (OMIM: 606683) FXYD domain-containing (  95)  258 72.0 1.5e-13
NP_005962 (OMIM: 604996) FXYD domain-containing io (  87)  211 60.1 5.4e-10
XP_016882366 (OMIM: 604996) PREDICTED: FXYD domain (  87)  211 60.1 5.4e-10
XP_016882367 (OMIM: 604996) PREDICTED: FXYD domain (  87)  211 60.1 5.4e-10
NP_001129483 (OMIM: 604996) FXYD domain-containing (  87)  211 60.1 5.4e-10
NP_001129479 (OMIM: 604996) FXYD domain-containing ( 144)  211 60.3 7.9e-10
NP_001671 (OMIM: 154020,601814) sodium/potassium-t (  66)  201 57.5 2.5e-09
NP_067614 (OMIM: 154020,601814) sodium/potassium-t (  64)  194 55.7 8.4e-09
NP_775183 (OMIM: 616926) FXYD domain-containing io (  89)  183 53.1 7.4e-08
NP_001171892 (OMIM: 616926) FXYD domain-containing (  89)  183 53.1 7.4e-08
NP_071289 (OMIM: 606684) FXYD domain-containing io (  80)  176 51.3 2.3e-07
NP_001129480 (OMIM: 604996) FXYD domain-containing (  96)  159 47.0 5.2e-06
XP_005259053 (OMIM: 604996) PREDICTED: FXYD domain ( 113)  159 47.1 5.9e-06
NP_001129484 (OMIM: 604996) FXYD domain-containing ( 113)  159 47.1 5.9e-06
NP_068710 (OMIM: 604996) FXYD domain-containing io ( 113)  159 47.1 5.9e-06
XP_011525334 (OMIM: 604996) PREDICTED: FXYD domain ( 170)  159 47.3   8e-06
NP_001307842 (OMIM: 606669) FXYD domain-containing ( 147)  135 41.1 0.00048
NP_659003 (OMIM: 606669) FXYD domain-containing io ( 178)  135 41.2 0.00055
NP_001158077 (OMIM: 606669) FXYD domain-containing ( 178)  135 41.2 0.00055
NP_054883 (OMIM: 606669) FXYD domain-containing io ( 178)  135 41.2 0.00055


>>XP_016882363 (OMIM: 602359) PREDICTED: phospholemman i  (92 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 841.8  bits: 160.4 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB6 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
               10        20        30        40        50        60

               70        80        90  
pF1KB6 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::
XP_016 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90  

>>NP_068702 (OMIM: 602359) phospholemman precursor [Homo  (92 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 841.8  bits: 160.4 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB6 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
               10        20        30        40        50        60

               70        80        90  
pF1KB6 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::
NP_068 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90  

>>NP_005022 (OMIM: 602359) phospholemman precursor [Homo  (92 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 841.8  bits: 160.4 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB6 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
               10        20        30        40        50        60

               70        80        90  
pF1KB6 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::
NP_005 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90  

>>NP_001265646 (OMIM: 602359) phospholemman precursor [H  (92 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 841.8  bits: 160.4 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB6 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
               10        20        30        40        50        60

               70        80        90  
pF1KB6 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::
NP_001 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90  

>>NP_001265647 (OMIM: 602359) phospholemman precursor [H  (92 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 841.8  bits: 160.4 E(85289): 3.8e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92)

               10        20        30        40        50        60
pF1KB6 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRRC
               10        20        30        40        50        60

               70        80        90  
pF1KB6 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::
NP_001 RCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90  

>>XP_016882364 (OMIM: 602359) PREDICTED: phospholemman i  (110 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 840.8  bits: 160.5 E(85289): 4.3e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:19-110)

                                 10        20        30        40  
pF1KB6                   MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLV
                         ::::::::::::::::::::::::::::::::::::::::::
XP_016 MWESKGTHCLIRGVPPRTMASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLV
               10        20        30        40        50        60

             50        60        70        80        90  
pF1KB6 IAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90       100       110

>>XP_016882365 (OMIM: 602359) PREDICTED: phospholemman i  (110 aa)
 initn: 608 init1: 608 opt: 608  Z-score: 840.8  bits: 160.5 E(85289): 4.3e-40
Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:19-110)

                                 10        20        30        40  
pF1KB6                   MASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLV
                         ::::::::::::::::::::::::::::::::::::::::::
XP_016 MWESKGTHCLIRGVPPRTMASLGHILVFCVGLLTMAKAESPKEHDPFTYDYQSLQIGGLV
               10        20        30        40        50        60

             50        60        70        80        90  
pF1KB6 IAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR
               70        80        90       100       110

>>NP_001158303 (OMIM: 606683) FXYD domain-containing ion  (95 aa)
 initn: 305 init1: 238 opt: 258  Z-score: 364.0  bits: 72.0 E(85289): 1.5e-13
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (7-84:4-83)

               10            20        30        40        50      
pF1KB6 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
             .:::  .::.     . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_001    MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
                  10        20        30        40        50       

         60        70        80        90      
pF1KB6 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR    
       ::::.:.:::. :.  : .::.  .. :            
NP_001 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
        60        70          80        90     

>>NP_071286 (OMIM: 606683) FXYD domain-containing ion tr  (95 aa)
 initn: 305 init1: 238 opt: 258  Z-score: 364.0  bits: 72.0 E(85289): 1.5e-13
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (7-84:4-83)

               10            20        30        40        50      
pF1KB6 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
             .:::  .::.     . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_071    MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
                  10        20        30        40        50       

         60        70        80        90      
pF1KB6 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR    
       ::::.:.:::. :.  : .::.  .. :            
NP_071 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
        60        70          80        90     

>>NP_001158304 (OMIM: 606683) FXYD domain-containing ion  (95 aa)
 initn: 305 init1: 238 opt: 258  Z-score: 364.0  bits: 72.0 E(85289): 1.5e-13
Smith-Waterman score: 258; 51.2% identity (75.6% similar) in 82 aa overlap (7-84:4-83)

               10            20        30        40        50      
pF1KB6 MASLGHILVFCVGLLT----MAKAESPKEHDPFTYDYQSLQIGGLVIAGILFILGILIVL
             .:::  .::.     . ::. :: ::: ::::.:.:::::.: .:: .:::..:
NP_001    MELVLVFLCSLLAPMVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLIL
                  10        20        30        40        50       

         60        70        80        90      
pF1KB6 SRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR    
       ::::.:.:::. :.  : .::.  .. :            
NP_001 SRRCKCSFNQKPRA--PGDEEAQVENLITANATEPQKAEN
        60        70          80        90     




92 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:38:43 2016 done: Fri Nov  4 23:38:43 2016
 Total Scan time:  3.650 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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