GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:09:30

Sequence gi568815576r:36390011_36606422 : 216412 bp : 50.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  20017  20149  133  0  1   74   94    45 0.156   3.92
 1.02 Term +  20286  20398  113  1  2   27   37   132 0.199   0.72
 1.03 PlyA +  22278  22283    6                               1.05

 2.08 PlyA -  24575  24570    6                               1.05
 2.07 Term -  31657  31260  398  2  2    0   50   236 0.462   6.24
 2.06 Intr -  37846  37744  103  1  1   76   96    58 0.116   5.15
 2.05 Intr -  54009  53906  104  1  2  136   85   -11 0.027   3.29
 2.04 Intr -  67915  67827   89  0  2    8  105    27 0.140  -3.99
 2.03 Intr -  72684  72491  194  0  2   32  116    85 0.536   3.99
 2.02 Intr -  74093  73908  186  2  0   31  103    96 0.272   5.29
 2.01 Init -  75344  75150  195  2  0   84   47   195 0.473  13.26
 2.00 Prom -  75684  75645   40                              -6.86

 3.14 PlyA -  77059  77054    6                               1.05
 3.13 Term -  77907  77794  114  0  0  105   48   281 0.997  24.37
 3.12 Intr -  86846  86723  124  1  1   63   64   172 0.896  12.89
 3.11 Intr -  90827  90565  263  2  2  137   79   154 0.876  15.69
 3.10 Intr -  91194  91138   57  0  0  106   47    72 0.876   3.98
 3.09 Intr -  96979  96917   63  1  0   23  108    60 0.003   0.41
 3.08 Intr - 100257 100178   80  1  2   82   80    86 0.005   6.47
 3.07 Intr - 103793 103623  171  0  0  136   93   170 0.999  22.21
 3.06 Intr - 106198 105957  242  0  2   90  105   336 0.998  32.69
 3.05 Intr - 108146 107981  166  0  1   82   64   203 0.997  16.32
 3.04 Intr - 111397 111231  167  0  2   92   99   286 0.995  29.70
 3.03 Intr - 114357 114088  270  2  0   61   78   535 0.999  46.46
 3.02 Intr - 114756 114505  252  2  0   99   96   282 0.997  26.65
 3.01 Init - 116412 115886  527  0  2   72  110  1121 0.998 105.03
 3.00 Prom - 120048 120009   40                              -6.46

 4.19 PlyA - 120872 120867    6                               1.05
 4.18 Term - 120990 120977   14  1  2  103   40     2 0.555  -4.74
 4.17 Intr - 121776 121493  284  2  2   92   93   587 0.781  56.66
 4.16 Intr - 122592 122450  143  0  2   55   72   211 0.998  15.35
 4.15 Intr - 126597 126468  130  2  1   81   84   216 0.945  21.20
 4.14 Intr - 126780 126695   86  0  2   84   94   110 0.997   9.82
 4.13 Intr - 127421 127291  131  0  2   76   77    91 0.947   7.21
 4.12 Intr - 128900 128753  148  2  1   99   91   179 0.998  19.11
 4.11 Intr - 129527 129395  133  1  1   98   75   276 0.999  27.95
 4.10 Intr - 130678 130566  113  1  2   64   77    96 0.968   5.28
 4.09 Intr - 133271 133199   73  1  1   80   95    32 0.856   2.51
 4.08 Intr - 133970 133885   86  2  2   17   78    90 0.503  -0.48
 4.07 Intr - 134722 134586  137  2  2   62   96   174 0.998  15.89
 4.06 Intr - 135699 135654   46  0  1  121  108    21 0.998   5.38
 4.05 Intr - 136121 135989  133  1  1   63   83   137 0.102  11.35
 4.04 Intr - 139314 139196  119  0  2  -13  -21   161 0.021  -5.64
 4.03 Intr - 146389 146286  104  2  2   62  116    45 0.452   4.59
 4.02 Intr - 146750 146599  152  1  2   90   71   171 0.473  15.41
 4.01 Init - 147594 147269  326  0  2   89  -89   560 0.345  35.20
 4.00 Prom - 148922 148883   40                              -4.16

 5.06 PlyA - 149613 149608    6                               1.05
 5.05 Term - 174876 174341  536  1  2  124   43  1010 0.999  94.51
 5.04 Intr - 176483 176343  141  0  0  124   92   184 0.990  22.72
 5.03 Intr - 197538 197455   84  1  0  118   75    90 0.888  10.49
 5.02 Intr - 198069 197962  108  1  0   83   49    54 0.631   1.26
 5.01 Init - 198726 198660   67  0  1   80   94    23 0.808   3.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   6187   6035  153  1  0   63   43   127 0.928   3.62
S.002 Init -   8567   8514   54  2  0   79   86    51 0.911   3.28
S.003 Term - 100257  99998  260  1  2   82   42   233 0.991  13.81
S.004 Init - 136111 135989  123  1  0   70   83   120 0.869  10.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:36390011_36606422|GENSCAN_predicted_peptide_1|81_aa
VTYTGGAAESAAAKFQAPAQPHSPQPGSPSTLPARKSCALHPRTGCSGSSATFLLWQEEL
KFQKPEKQAAVKTAEARPTAL

>gi568815576r:36390011_36606422|GENSCAN_predicted_CDS_1|246_bp
gttacatacacgggcggtgcagcggagagcgcggcggcgaagtttcaggcccctgcccag
ccccactcgccgcagccaggtagcccctccacccttcctgcccggaagtcctgcgcgctc
cacccaaggacaggatgctctgggagctctgccacgtttctgctgtggcaggaagaactg
aaattccagaagccggagaaacaagccgccgtcaagactgctgaagcgaggcctacggcc
ctgtaa

>gi568815576r:36390011_36606422|GENSCAN_predicted_peptide_2|422_aa
MAVSHAGCAHGILLVILFDQFQDTDLTGDAAGSGLSAHGHSLGATLGPMTVDGVGRHLLE
AFSHQCLPLPGARASSTPTPAAWGKLLQEAKVVLAKLRKSRMCGLWAGNGPENNVGAVSM
EGRMLATVFTILSPSCTISKLGLMTVPANEVTAQQVEARWHRLEVPEVLSVWLSPFPYPQ
PHLKQETPGFPRKALRDQLQLPELTEKVQGQPKEGTGLRSAGSSKLYHLFLDNPGYSLYL
KILNKILSAKFLLPCKVAYAYFIHEEMLPERGPDPDPKRGFLDLRQEIIQGVSHCAWPLA
DALKSINNAKKRGKRQVLIRPCSKVIVRFLTVMIKHDYTGEFEIIDGHRAGKIVVTVTGR
LNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARQNHTGGKILGF
FF

>gi568815576r:36390011_36606422|GENSCAN_predicted_CDS_2|1269_bp
atggccgtgagtcatgctggctgtgctcacggaatcctcctggtgatcctgtttgaccaa
ttccaggacactgacctcaccggggatgccgctggctctgggctgtcagcccacggtcat
tctctgggtgccacattgggccccatgactgtggatggggttggcagacacctgctggaa
gcctttagccaccagtgcctgcccctaccaggggccagggccagctcaacccccaccccg
gccgcctggggaaagctgctccaggaagcgaaggtagtgctggccaagctgcggaaatcc
cgaatgtgtgggctctgggcagggaacggcccagaaaacaatgttggggccgtgtccatg
gagggcaggatgctggcgacggttttcaccattttgagccccagttgcaccatctccaag
ttggggctcatgacagtccctgcaaatgaggtcacggctcagcaggtggaagcacgctgg
caccgattggaagttccagaagtgttatctgtgtggctttctcctttcccctacccccag
ccacatcttaaacaggaaacaccgggcttcccaaggaaggccctcagggaccagctccaa
ctgcctgagttgacagagaaggtccagggccagccaaaggaagggacaggcctgaggtca
gctgggtcttcgaaattatatcacctcttcctagataatccaggatactctctttatctc
aagattcttaacaaaatcctctcagcaaagttccttttgccatgtaaggtcgcttacgcc
tattttatacatgaagaaatgttaccagaaaggggtcctgatccagaccccaagagagga
ttcttggatctcaggcaagaaataattcagggcgtgagccactgcgcctggcccctggct
gatgccctcaagagcatcaacaatgccaaaaagagaggcaaacgccaggtgcttattagg
ccatgctccaaagtcatcgtccgatttctcactgtgatgataaagcatgattacactggc
gaatttgaaatcattgatggtcacagagctgggaaaattgttgtgactgtcacaggcagg
ctcaacaagtgtggagtgatcagccccagatttgatgtgcaactcaaagatctagaaaaa
tggcagaataatctgcttccatcccgccagtttggtttcattgtactgacaacctcagct
ggcatcatggaccatgaagaagcaagacaaaaccacacaggagggaaaatcctgggattc
tttttctag

>gi568815576r:36390011_36606422|GENSCAN_predicted_peptide_3|831_aa
MGLSAAAPLWGPPGLLLAIALHPALSVPPRRDYCVLGAGPAGLQMAYFLQRAGRDYAVFE
RAPRPGSFFTRYPRHRKLISINKRYTGKANAEFNLRHDWNSLLSHDPRLLFRHYSRAYFP
DARDMVRYLGDFADTLGLRVQYNTTIAHVTLDKDRQAWNGHYFILTDQKGQVHQCSVLFV
ATGLSVPNQVDFPGSEYAEGYESVSVDPEDFVGQNVLILGRGNSAFETAENILGVTNFIH
MLSRSRVRLSWATHYVGDLRAINNGLLDTYQLKSLDGLLESDLTDLAILKDSKGKFHVTP
KFFLEEANTNQSADSITLPQDDNDNFAMRVPYDRVIRCLGWNFDFSIFNKSLRLNSGNAF
GKKYPLIRASYESKGSRGLFILGTASHSVDYRKSAGGFIHGFRYTVRAVHRLLEHRHHSV
TWPATELPITQLTSSIVRRVNEASGLYQMFGVLADVILLKENSTAFEYLEEFPIQMLAQL
ETLTGRKAKHGLFVINMEYGRNFSGPDKDVFFDDRSVGHTEDAWQSNFLHPVIYYYRYLP
TEQEVRFRPAHWPLPRPTAIHHIVEDFLTDWTAPIGHILPLRRFLENCLDTDLRSFYAES
CFLFALTRQKLPPFCQQGYLRMQGLQGRKKRAGDLGERILMYHSDQCGQYNSNFLEVAVG
RPIMCMAQRLLLRRFLASVISRKPSQGQWPPLTSRALQTPQCSPGGLTVTPNPARTIYTT
RISLTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAK
VDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLIG

>gi568815576r:36390011_36606422|GENSCAN_predicted_CDS_3|2496_bp
atgggcctctccgctgcggccccgttgtggggtcccccggggctgctcctggccatcgcc
ctgcacccagcgctgtcggtgcccccgcgccgggactactgcgtgctgggcgctgggccc
gcgggcctgcagatggcctacttcctgcagcgcgctggacgcgactacgcagtgttcgag
cgggccccgcggcccggcagcttcttcacacgctacccgcggcaccgcaagctcatcagc
atcaacaagcggtacacgggcaaggctaacgccgagttcaacctccgccacgactggaac
tctctgctcagccacgacccccggctgctcttcagacactactcgcgtgcctacttcccc
gacgcccgcgacatggtgcgctacctgggtgacttcgcggacacgctggggctccgtgtc
cagtacaacaccaccatcgcccacgtcactctggacaaggaccgacaggcctggaatggc
cactacttcatcctaactgaccagaagggccaggtgcatcagtgcagcgtcctctttgta
gccactggtttatcagtccccaaccaggttgacttccctggctccgaatatgcagagggt
tacgagtccgtgtccgtggaccctgaggactttgtaggccagaatgtgctgatcctgggt
cgtgggaactcggcctttgagacagcagagaacatcttgggtgtcacaaactttatccat
atgctcagccgctcccgggtccgtctgtcctgggccacccactacgttggagacctcaga
gccatcaacaatggcctgctggatacctaccagctcaagtccctggacgggctgctcgag
tctgacctgacggatctggccatcctgaaggacagcaaaggcaagttccatgtcaccccg
aaattcttcctggaagaagccaacaccaaccagagtgccgactccatcaccctcccccag
gacgacaatgacaactttgccatgcgcgtgccctatgaccgggtaatccgctgcctgggc
tggaactttgacttctccattttcaataagtccctcagacttaactcgggaaatgcattc
ggcaagaagtacccgctgattcgagctagctacgaatccaaaggaagccggggtctgttt
atcctgggtactgccagccactcggtggactaccggaaatctgctgggggcttcatccac
ggattccgatacacagtgcgtgctgttcaccggctcctggagcaccgccaccacagcgtc
acctggcccgccactgagctccccatcacacagctgaccagctccatcgtgcggcgcgtg
aatgaggcttctgggctctaccagatgttcggtgtgctggccgatgtcatcctgttgaag
gagaattccacggcctttgagtacctggaggagttccccatacagatgctggcccagctg
gagacactcacagggaggaaggcaaagcacgggctcttcgtcatcaacatggaatatggc
agaaatttctctggccccgacaaggacgtcttctttgatgaccggtctgtggggcacaca
gaagatgcctggcagtctaactttcttcatcctgtcatctactactatagatacctcccc
accgaacaggaggtgaggttccgccctgcacactggcccctgcctcggcccacggccatc
catcacatcgtggaagacttcttaacagactggactgccccgatcgggcacatcctacct
ctgaggcgcttcctggagaactgtttggacaccgatttgcgaagcttctatgcagagtcc
tgcttcctgttcgccctcacgcgccagaagttgccacccttttgccagcaggggtacctg
aggatgcagggactccaaggcagaaagaaacgggctggcgacctgggggaaaggatcctc
atgtaccacagcgaccaatgtgggcagtacaatagcaacttcctggaagttgctgtagga
agaccaataatgtgtatggctcagcgacttcttctgaggaggttcctggcctctgtcatc
tccaggaagccctctcagggtcagtggccacccctcacttccagagccctgcagacccca
caatgcagtcctggtggcctgactgtaacacccaacccagcccggacaatatacaccacg
aggatctccttgacaacctttaatatccaggatggacctgactttcaagaccgagtggtc
aacagtgagacaccagtggttgtggatttccacgcacagtggtgtggaccctgcaagatc
ctggggccgaggttagagaagatggtggccaagcagcacgggaaggtggtgatggccaag
gtggatattgatgaccacacagacctcgccattgagtatgaggtgtcagcggtgcccact
gtgctggccatgaagaatggggacgtggtggacaagtttgtgggcatcaaggatgaggat
cagttggaggccttcctgaagaagctgattggctga

>gi568815576r:36390011_36606422|GENSCAN_predicted_peptide_4|785_aa
MKCILVAIEGTEALFYWTDEEFEESLQLKFGQSENEEEELPALQDQLSPLLAPVIISSMT
MLEKLSDTYTCFSMENSNSLYVLHLFGECLFIAINGDHTKSEGDLQRKLLRPPDLGQRVQ
LWEHFQSLLWTYSRLREQEQCFAMEVITGRRSPQDLELSEIFEDSSFNPPLLLPQNYIEV
EQEGKAVEKNTALKANEDAWRNAVTDFRVDLRFTAREFFRPTQRKRESSLRQRRFWKMAK
FMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQF
GGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQRNLRRDKDRRNMLQFNLQILP
KSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDSSVEVRSDWEVKEEMDFPQLMKMR
YLEVSEPQDIECCGALEYYDKAFDRITTRSEKPLRSIKRIFHTVTTTDDPVIRKLAKTQG
NVFATDAILATLMSCTRSVYSWDIVVQRVGSKLFFDKRDNSDFDLLTVSETANEPPQDEG
NSFNSPRNLAMEATYINHNFSQQCLRMGKERYNFPNPNPFVEDDMDKNEIASVAYRYRRW
KLGDDIDLIVRCEHDGVMTGANGEVSFINIKTLNEWDSRHCNGVDWRQKLDSQRGAVIAT
ELKNNSYKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQINLS
VENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSSDEDEEEEEEEEEEE
EEEET

>gi568815576r:36390011_36606422|GENSCAN_predicted_CDS_4|2358_bp
atgaagtgcatcttggtggccattgagggcacagaggccctcttctactggacggatgag
gagtttgaagagagtctccagctgaagttcgggcagtcagagaatgaggaagaagagctc
cctgccctacaggaccagctcagccccctcctagccccggtcatcatctcctccatgacg
atgctggagaagctctcggacacctacacctgcttctccatggaaaacagcaactccctg
tatgtccttcacctgtttggagaatgcctgttcattgccatcaatggcgaccacaccaag
agcgagggggacctgcagcggaagctgctgcggcccccagacctggggcagcgtgtccag
ctgtgggagcactttcagagcctgctgtggacctatagccgcctgcgggagcaggaacag
tgcttcgccatggaggtgattactgggcgcaggagtccgcaggacttggagctgtcagaa
atctttgaagacagttccttcaaccctcccctcctcctcccacaaaattatattgaggtg
gaacaggaggggaaagcagtggagaagaacacagcgctaaaggctaatgaggacgcctgg
cgaaacgcagtaacggatttccgggtggaccttcgctttacggctcgtgagttcttccgc
ccaacccagaggaagcgggagagcagtttacgacagcgccgattttggaagatggcaaag
ttcatgacacccgtgatccaggacaacccctcaggctggggtccctgtgcggttcccgag
cagtttcgggatatgccctaccagccgttcagcaaaggagatcggctaggaaaggttgca
gactggacaggagccacataccaagataagaggtacacaaataagtactcctctcagttt
ggtggtggaagtcaatatgcttatttccatgaggaggatgaaagtagcttccagctggtg
gatacagcgcgcacacagaagacggcctaccagcggaatcgaatgagatttgcccagagg
aacctccgcagagacaaagatcgtcggaacatgttgcagttcaacctgcagatcctgcct
aagagtgccaaacagaaagagagagaacgcattcgactgcagaaaaagttccagaaacaa
tttggggttaggcagaaatgggatcagaaatcacagaaaccccgagactcttcagttgaa
gttcgtagtgattgggaagtgaaagaggaaatggattttcctcagttgatgaagatgcgc
tacttggaagtatcagagccacaggacattgagtgttgtggggccctagaatactacgac
aaagcctttgaccgcatcaccacgaggagtgagaagccactgcggagcatcaagcgcatc
ttccacactgtcaccaccacagacgaccctgtcatccgcaagctggcaaaaactcagggg
aatgtgtttgccactgatgccatcctggccacgctgatgagctgtacccgctcagtgtat
tcctgggatattgtcgtccagagagttgggtccaaactcttctttgacaagagagacaac
tctgactttgacctcctgacagtgagtgagactgccaatgagccccctcaagatgaaggt
aattccttcaattcaccccgcaacctggccatggaggcaacctacatcaaccacaatttc
tcccagcagtgcttgagaatggggaaggaaagatacaacttccccaacccaaacccgttt
gtggaggacgacatggataagaatgaaatcgcctctgttgcgtaccgttaccgcaggtgg
aagcttggagatgatattgaccttattgtccgttgtgagcacgatggcgtcatgactgga
gccaacggggaagtgtccttcatcaacatcaagacactcaatgagtgggattccaggcac
tgtaatggcgttgactggcgtcagaagctggactctcagcgaggggctgtcattgccacg
gagctgaagaacaacagctacaagttggcccggtggacctgctgtgctttgctggctgga
tctgagtacctcaagcttggttatgtgtctcggtaccacgtgaaagactcctcacgccac
gtcatcctaggcacccagcagttcaagcctaatgagtttgccagccagatcaacctgagc
gtggagaatgcctggggcattttacgctgcgtcattgacatctgcatgaagctggaggag
ggcaaatacctcatcctcaaggaccccaacaagcaggtcatccgtgtctacagcctccct
gatggcaccttcagctctgatgaagatgaggaggaagaggaggaggaagaagaggaagaa
gaagaggaagaaacttaa

>gi568815576r:36390011_36606422|GENSCAN_predicted_peptide_5|311_aa
MHQLSEPPRQSAREEFLLSPLSEQLAAGFGEFRAELQMGKCFAGSSKGLWQHLAAPVRGN
FKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRH
NIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFIIAEM
VGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHSRDA
SPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKDSLH
SNTANRRTTPV

>gi568815576r:36390011_36606422|GENSCAN_predicted_CDS_5|936_bp
atgcatcagctcagtgaacctccacgacaatctgccagggaagaattcttgttatcgcca
ctctcagagcagttggcggctgggtttggtgaattccgtgcggaattgcagatgggaaag
tgttttgcaggctcttctaaagggctgtggcagcatctggcagcaccagtgcgggggaat
ttcaaaggtctgtgcaagcaaattgatcacttcccagaggatgcagattacgaagctgac
acagcagaatatttcctccgggccgtgagggcctccagcattttcccaatcctgagtgtg
attctgcttttcatgggtggcctctgcatcgcagccagcgagttctacaaaactcgacac
aacatcatcctgagtgccggcatcttcttcgtgtctgcaggtctgagtaacatcattggc
atcatagtgtacatatctgccaatgccggagacccctccaagagcgactccaaaaagaat
agttactcatacggctggtccttctacttcggggccctgtccttcatcatcgccgagatg
gtcggggtgctggcggtgcacatgtttatcgaccggcacaaacagctgcgggccacggcc
cgcgccacggactacctccaggcctctgccatcacccgcatccccagctaccgctaccgc
taccagcgccgcagccgctccagctcgcgctccacggagccctcacactccagggacgcc
tcccccgtgggcatcaagggcttcaacaccctgccgtccacggagatctccatgtacacg
ctcagcagggaccccctgaaggccgccaccacgcccaccgccacctacaactccgacagg
gataacagcttcctccaggttcacaactgtatccagaaggagaacaaggactctctccac
tccaacacagccaaccgccggaccacccccgtataa