Result of FASTA (omim) for pF1KB6461
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6461, 321 aa
  1>>>pF1KB6461 321 - 321 aa - 321 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4825+/-0.000321; mu= 12.0393+/- 0.020
 mean_var=130.6867+/-25.083, 0's: 0 Z-trim(120.0): 277  B-trim: 135 in 2/50
 Lambda= 0.112191
 statistics sampled from 34498 (34801) to 34498 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.408), width:  16
 Scan time:  8.570

The best scores are:                                      opt bits E(85289)
XP_005272519 (OMIM: 151445) PREDICTED: low affinit ( 321) 2221 370.3 3.1e-102
NP_001993 (OMIM: 151445) low affinity immunoglobul ( 321) 2221 370.3 3.1e-102
NP_001207429 (OMIM: 151445) low affinity immunoglo ( 321) 2221 370.3 3.1e-102
NP_001193948 (OMIM: 151445) low affinity immunoglo ( 320) 2174 362.7 5.9e-100
NP_001231785 (OMIM: 616256) C-type lectin domain f ( 281)  438 81.6 2.1e-15
NP_940894 (OMIM: 616256) C-type lectin domain fami ( 293)  438 81.6 2.1e-15
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332)  402 75.9 1.3e-13
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263)  399 75.3 1.6e-13
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353)  388 73.6 6.7e-13
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343)  381 72.5 1.4e-12
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348)  381 72.5 1.5e-12
XP_006722675 (OMIM: 605872) PREDICTED: C-type lect ( 371)  381 72.5 1.5e-12
XP_006722676 (OMIM: 605872) PREDICTED: C-type lect ( 371)  381 72.5 1.5e-12
NP_001138377 (OMIM: 605872) C-type lectin domain f ( 375)  381 72.5 1.5e-12
NP_001138382 (OMIM: 605872) C-type lectin domain f ( 376)  381 72.5 1.5e-12
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289)  379 72.1 1.6e-12
XP_006721587 (OMIM: 108361) PREDICTED: asialoglyco ( 248)  378 71.9 1.6e-12
NP_550436 (OMIM: 108361) asialoglycoprotein recept ( 292)  379 72.1 1.6e-12
XP_006722674 (OMIM: 605872) PREDICTED: C-type lect ( 398)  381 72.5 1.6e-12
NP_055072 (OMIM: 605872) C-type lectin domain fami ( 399)  381 72.5 1.6e-12
NP_550434 (OMIM: 108361) asialoglycoprotein recept ( 311)  379 72.1 1.7e-12
NP_001172 (OMIM: 108361) asialoglycoprotein recept ( 311)  379 72.1 1.7e-12
XP_016882280 (OMIM: 616838) PREDICTED: C-type lect ( 243)  377 71.7 1.8e-12
XP_016880140 (OMIM: 108361) PREDICTED: asialoglyco ( 292)  377 71.8   2e-12
XP_016882279 (OMIM: 616838) PREDICTED: C-type lect ( 293)  377 71.8   2e-12
XP_016882277 (OMIM: 616838) PREDICTED: C-type lect ( 310)  377 71.8 2.1e-12
XP_016882274 (OMIM: 616838) PREDICTED: C-type lect ( 310)  377 71.8 2.1e-12
XP_016882275 (OMIM: 616838) PREDICTED: C-type lect ( 310)  377 71.8 2.1e-12
XP_016882276 (OMIM: 616838) PREDICTED: C-type lect ( 310)  377 71.8 2.1e-12
XP_016882278 (OMIM: 616838) PREDICTED: C-type lect ( 310)  377 71.8 2.1e-12
XP_016880141 (OMIM: 108361) PREDICTED: asialoglyco ( 311)  377 71.8 2.1e-12
XP_016880142 (OMIM: 108361) PREDICTED: asialoglyco ( 311)  377 71.8 2.1e-12
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292)  376 71.6 2.2e-12
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268)  375 71.4 2.4e-12
NP_001191047 (OMIM: 616838) C-type lectin domain f ( 378)  377 71.9 2.4e-12
XP_006721589 (OMIM: 108361) PREDICTED: asialoglyco ( 287)  367 70.1 6.1e-12
NP_550435 (OMIM: 108361) asialoglycoprotein recept ( 287)  367 70.1 6.1e-12
XP_005256705 (OMIM: 108361) PREDICTED: asialoglyco ( 287)  367 70.1 6.1e-12
NP_001188281 (OMIM: 108361) asialoglycoprotein rec ( 306)  367 70.2 6.4e-12
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312)  367 70.2 6.5e-12
XP_011522168 (OMIM: 108361) PREDICTED: asialoglyco ( 299)  365 69.8 7.8e-12
XP_011522165 (OMIM: 108361) PREDICTED: asialoglyco ( 299)  365 69.8 7.8e-12
XP_011522167 (OMIM: 108361) PREDICTED: asialoglyco ( 299)  365 69.8 7.8e-12
XP_011522166 (OMIM: 108361) PREDICTED: asialoglyco ( 318)  365 69.8 8.2e-12
NP_001184145 (OMIM: 108360) asialoglycoprotein rec ( 252)  363 69.4 8.7e-12
NP_001662 (OMIM: 108360) asialoglycoprotein recept ( 291)  363 69.5 9.6e-12
XP_011522163 (OMIM: 108360) PREDICTED: asialoglyco ( 291)  363 69.5 9.6e-12
XP_011522164 (OMIM: 108361) PREDICTED: asialoglyco ( 410)  365 69.9 9.9e-12
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266)  355 68.2 2.2e-11
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360)  351 67.6 4.3e-11


>>XP_005272519 (OMIM: 151445) PREDICTED: low affinity im  (321 aa)
 initn: 2221 init1: 2221 opt: 2221  Z-score: 1956.6  bits: 370.3 E(85289): 3.1e-102
Smith-Waterman score: 2221; 99.7% identity (100.0% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESM
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
XP_005 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPASEGSAESM
              250       260       270       280       290       300

              310       320 
pF1KB6 GPDSRPDPDGRLPTPSAPLHS
       :::::::::::::::::::::
XP_005 GPDSRPDPDGRLPTPSAPLHS
              310       320 

>>NP_001993 (OMIM: 151445) low affinity immunoglobulin e  (321 aa)
 initn: 2221 init1: 2221 opt: 2221  Z-score: 1956.6  bits: 370.3 E(85289): 3.1e-102
Smith-Waterman score: 2221; 99.7% identity (100.0% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESM
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_001 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPASEGSAESM
              250       260       270       280       290       300

              310       320 
pF1KB6 GPDSRPDPDGRLPTPSAPLHS
       :::::::::::::::::::::
NP_001 GPDSRPDPDGRLPTPSAPLHS
              310       320 

>>NP_001207429 (OMIM: 151445) low affinity immunoglobuli  (321 aa)
 initn: 2221 init1: 2221 opt: 2221  Z-score: 1956.6  bits: 370.3 E(85289): 3.1e-102
Smith-Waterman score: 2221; 99.7% identity (100.0% similar) in 321 aa overlap (1-321:1-321)

               10        20        30        40        50        60
pF1KB6 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESM
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_001 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPASEGSAESM
              250       260       270       280       290       300

              310       320 
pF1KB6 GPDSRPDPDGRLPTPSAPLHS
       :::::::::::::::::::::
NP_001 GPDSRPDPDGRLPTPSAPLHS
              310       320 

>>NP_001193948 (OMIM: 151445) low affinity immunoglobuli  (320 aa)
 initn: 2174 init1: 2174 opt: 2174  Z-score: 1915.5  bits: 362.7 E(85289): 5.9e-100
Smith-Waterman score: 2174; 99.7% identity (100.0% similar) in 314 aa overlap (8-321:7-320)

               10        20        30        40        50        60
pF1KB6 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001  MNPPSQEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB6 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB6 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB6 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGEFIWVDGSHV
     180       190       200       210       220       230         

              250       260       270       280       290       300
pF1KB6 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESM
       :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
NP_001 DYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPASEGSAESM
     240       250       260       270       280       290         

              310       320 
pF1KB6 GPDSRPDPDGRLPTPSAPLHS
       :::::::::::::::::::::
NP_001 GPDSRPDPDGRLPTPSAPLHS
     300       310       320

>>NP_001231785 (OMIM: 616256) C-type lectin domain famil  (281 aa)
 initn: 448 init1: 196 opt: 438  Z-score: 397.6  bits: 81.6 E(85289): 2.1e-15
Smith-Waterman score: 438; 29.7% identity (56.8% similar) in 273 aa overlap (19-288:17-281)

               10        20        30        40        50        60
pF1KB6 MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERA
                         ::   ..:  :::..::: .:..::        .: . ..  
NP_001   MDTTRYRPWGRWVHWSRRPLFLALAVLVTTVLWAVILSILLSKASTERAALLDGHDLL
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB6 ARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELSWNLNGLQADL
         :.:. .  : . . .    .:  .  . .:.  :::  . ... .:    :  :.  .
NP_001 RTNASKQTAALGALKEEVGDCHSCCSGTQAQLQTTRAELGEAQAKLMEQESALRELRERV
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB6 SSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKG
       ..  ..    :...   : :  : :     .:: .:   :. :: .:..:. .::.:.  
NP_001 TQGLAEAGRGREDVRTELFRALEAV-----RLQNNS---CEPCPTSWLSFEGSCYFFSVP
      120       130       140               150       160       170

              190       200       210       220       230          
pF1KB6 TKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKGE---FIWVDG
          :. :.  : :  ..:: . . .:: :::...   : :.::: .   :.   . ::::
NP_001 KTTWAAAQDHCADASAHLVIVGGLDEQGFLTRNTRGRGYWLGLRAVRHLGKVQGYQWVDG
              180       190       200       210       220       230

       240       250       260       270       280       290       
pF1KB6 SHVDYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSA
         ...:.:  :::..    :.::::  .: :::: :: .  .:.:..  .:         
NP_001 VSLSFSHWNQGEPNDAWGRENCVMMLHTGLWNDAPCDSEKDGWICEKRHNC         
              240       250       260       270       280          

       300       310       320 
pF1KB6 ESMGPDSRPDPDGRLPTPSAPLHS

>>NP_940894 (OMIM: 616256) C-type lectin domain family 4  (293 aa)
 initn: 448 init1: 196 opt: 438  Z-score: 397.4  bits: 81.6 E(85289): 2.1e-15
Smith-Waterman score: 438; 29.7% identity (56.8% similar) in 273 aa overlap (19-288:29-293)

                         10        20        30        40        50
pF1KB6           MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAALWAGLLTLLLLWHWDTT
                                   ::   ..:  :::..::: .:..::       
NP_940 MDTTRYSKWGGSSEEVPGGPWGRWVHWSRRPLFLALAVLVTTVLWAVILSILLSKASTER
               10        20        30        40        50        60

               60        70        80        90       100       110
pF1KB6 QSLKQLEERAARNVSQVSKNLESHHGDQMAQKSQSTQISQELEELRAEQQRLKSQDLELS
        .: . ..    :.:. .  : . . .    .:  .  . .:.  :::  . ... .:  
NP_940 AALLDGHDLLRTNASKQTAALGALKEEVGDCHSCCSGTQAQLQTTRAELGEAQAKLMEQE
               70        80        90       100       110       120

              120       130       140       150       160       170
pF1KB6 WNLNGLQADLSSFKSQELNERNEASDLLERLREEVTKLRMELQVSSGFVCNTCPEKWINF
         :  :.  ...  ..    :...   : :  : :     .:: .:   :. :: .:..:
NP_940 SALRELRERVTQGLAEAGRGREDVRTELFRALEAV-----RLQNNS---CEPCPTSWLSF
              130       140       150            160          170  

              180       190       200       210       220       230
pF1KB6 QRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIGLRNLDLKG
       . .::.:.     :. :.  : :  ..:: . . .:: :::...   : :.::: .   :
NP_940 EGSCYFFSVPKTTWAAAQDHCADASAHLVIVGGLDEQGFLTRNTRGRGYWLGLRAVRHLG
            180       190       200       210       220       230  

                 240       250       260       270       280       
pF1KB6 E---FIWVDGSHVDYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLAT
       .   . ::::  ...:.:  :::..    :.::::  .: :::: :: .  .:.:..  .
NP_940 KVQGYQWVDGVSLSFSHWNQGEPNDAWGRENCVMMLHTGLWNDAPCDSEKDGWICEKRHN
            240       250       260       270       280       290  

       290       300       310       320 
pF1KB6 CTPPASEGSAESMGPDSRPDPDGRLPTPSAPLHS
       :                                 
NP_940 C                                 
                                         

>>NP_001138379 (OMIM: 605872) C-type lectin domain famil  (332 aa)
 initn: 347 init1: 169 opt: 402  Z-score: 365.2  bits: 75.9 E(85289): 1.3e-13
Smith-Waterman score: 422; 33.3% identity (63.9% similar) in 249 aa overlap (57-288:84-328)

         30        40        50        60        70        80      
pF1KB6 LGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERAARNVSQVSKNLESHHGDQMAQKSQST
                                     :.   ... :   .:..  :. . .::.  
NP_001 VPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGE-LPEKSKLQ
            60        70        80        90       100        110  

         90       100         110       120               130      
pF1KB6 QISQELEELRAEQQRL--KSQDLELSWNLNGLQADLSSF--KS------QELNERNEA-S
       .: ::: .:.:   .:  ::.  :.  .:. :.: .. .  ::      :::.: . : .
NP_001 EIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVG
            120       130       140       150       160       170  

         140        150       160       170       180       190    
pF1KB6 DLLERLR-EEVTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKGTKQWVHARYACDDM
       .: :. . .:. .   .:...   .:  ::. :  :: .::..... ..:  .  ::...
NP_001 ELPEKSKLQEIYQELTQLKAAVERLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEV
            180       190       200       210       220       230  

          200       210         220       230       240            
pF1KB6 EGQLVSIHSPEEQDFLTKHASHTG--SWIGLRNLDLKGEFIWVDGSHVDYS---NWAPGE
       ..::: :.. :::.::  ..:...  ::.:: .:. .: . ::::: .. :    :  ::
NP_001 RAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGE
            240       250       260       270       280       290  

     250       260       270       280       290       300         
pF1KB6 PTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESMGPDSRPDPD
       :.. : .:::. . ::: :::  ::   . :.: . :.:                     
NP_001 PNN-SGNEDCAEFSGSG-WNDNRCDVD-NYWICKKPAACFRDE                 
             300        310        320       330                   

     310       320 
pF1KB6 GRLPTPSAPLHS

>>NP_001138378 (OMIM: 605872) C-type lectin domain famil  (263 aa)
 initn: 343 init1: 169 opt: 399  Z-score: 363.9  bits: 75.3 E(85289): 1.6e-13
Smith-Waterman score: 412; 33.0% identity (66.1% similar) in 230 aa overlap (64-288:51-259)

            40        50        60        70        80        90   
pF1KB6 LWAGLLTLLLLWHWDTTQSLKQLEERAARNVSQVSKNLESHHGDQMAQKSQSTQISQELE
                                     ::.: ..: .....: :  .. ::..  . 
NP_001 TSGIRLFPRDFQFQQIHGHKSSTVPFLLGPVSKVPSSLSQEQSEQDAIYQNLTQLKAAVG
               30        40        50        60        70        80

           100       110       120       130       140       150   
pF1KB6 ELRAEQQRLKSQDLELSWNLNGLQADLSSFKSQELNERNEASDLLERLREEVTKLRMELQ
       :: .:...:.    :.  .:. :.: ..     :: :...    :... .:.:.:.  ..
NP_001 EL-SEKSKLQ----EIYQELTQLKAAVG-----ELPEKSK----LQEIYQELTRLKAAVE
                    90       100            110           120      

           160       170       180       190       200       210   
pF1KB6 VSSGFVCNTCPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKH
            .:  ::. :  :: .::..... ..:  .  ::.....::: :.. :::.::  .
NP_001 R----LCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQ
            130       140       150       160       170       180  

             220       230       240          250       260        
pF1KB6 ASHTG--SWIGLRNLDLKGEFIWVDGSHVDYS---NWAPGEPTSRSQGEDCVMMRGSGRW
       .:...  ::.:: .:. .: . ::::: .. :    :  :::.. : .:::. . ::: :
NP_001 TSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN-SGNEDCAEFSGSG-W
            190       200       210       220        230        240

      270       280       290       300       310       320 
pF1KB6 NDAFCDRKLGAWVCDQLATCTPPASEGSAESMGPDSRPDPDGRLPTPSAPLHS
       ::  ::   . :.: . :.:                                 
NP_001 NDNRCDVD-NYWICKKPAACFRDE                             
               250       260                                

>>NP_001138381 (OMIM: 605872) C-type lectin domain famil  (353 aa)
 initn: 335 init1: 169 opt: 388  Z-score: 352.6  bits: 73.6 E(85289): 6.7e-13
Smith-Waterman score: 421; 30.9% identity (60.2% similar) in 324 aa overlap (5-288:32-349)

                                         10        20        30    
pF1KB6                           MEEGQYSEIEELPRRRCCRRGTQIVLLGLVTAAL
                                     :...:.       :  :   ..: :..  :
NP_001 SDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCL-GHGALVLQLLSFML
              10        20        30        40         50        60

           40        50        60        70        80        90    
pF1KB6 WAGLLTLLLLWHWDTTQSLKQLEERAARNVSQVSKNLESHHGDQMAQKSQSTQISQELEE
        ::.:. .:.    . .::.: :.     . :   .:..  :. ...::.  .: ::: .
NP_001 LAGVLVAILVQVSKVPSSLSQ-EQSEQDAIYQNLTQLKAAVGE-LSEKSKLQEIYQELTQ
               70        80         90       100        110        

          100         110       120               130              
pF1KB6 LRAEQQRL--KSQDLELSWNLNGLQADLSSF--KS------QELNERNEA-SDL-----L
       :.:   .:  ::.  :.  .:. :.: .. .  ::      :::.. . : ..:     :
NP_001 LKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKL
      120       130       140       150       160       170        

      140                       150          160       170         
pF1KB6 ERLREEVTKLR----------------MEL-QVSSGF--VCNTCPEKWINFQRKCYYFGK
       ... .:.:.:.                .:: .....:  .:  ::. :  :: .::....
NP_001 QEIYQELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRHCPKDWTFFQGNCYFMSN
      180       190       200       210       220       230        

     180       190       200       210         220       230       
pF1KB6 GTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTG--SWIGLRNLDLKGEFIWVDG
       . ..:  .  ::.....::: :.. :::.::  ..:...  ::.:: .:. .: . ::::
NP_001 SQRNWHDSVTACQEVRAQLVVIKTAEEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDG
      240       250       260       270       280       290        

       240          250       260       270       280       290    
pF1KB6 SHVDYS---NWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASE
       : .. :    :  :::.. : .:::. . ::: :::  ::   . :.: . :.:      
NP_001 SPLSPSFQRYWNSGEPNN-SGNEDCAEFSGSG-WNDNRCDVD-NYWICKKPAACFRDE  
      300       310        320        330        340       350     

          300       310       320 
pF1KB6 GSAESMGPDSRPDPDGRLPTPSAPLHS

>>XP_006722677 (OMIM: 605872) PREDICTED: C-type lectin d  (343 aa)
 initn: 347 init1: 169 opt: 381  Z-score: 346.6  bits: 72.5 E(85289): 1.4e-12
Smith-Waterman score: 413; 32.6% identity (62.8% similar) in 239 aa overlap (57-288:118-339)

         30        40        50        60        70        80      
pF1KB6 LGLVTAALWAGLLTLLLLWHWDTTQSLKQLEERAARNVSQVSKNLESHHGDQMAQKSQST
                                     :.   ... :    :..  :. . .::.  
XP_006 AAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGE-LPEKSKLQ
        90       100       110       120       130        140      

         90       100         110       120       130       140    
pF1KB6 QISQELEELRAEQQRL--KSQDLELSWNLNGLQADLSSFKSQELNERNEASDLLERLREE
       .: ::: ::.:   .:  ::.  :.  .:. :.: ..     :: ....     ... .:
XP_006 EIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVG-----ELPDQSKQ----QQIYQE
        150       160       170       180            190           

          150       160       170       180       190       200    
pF1KB6 VTKLRMELQVSSGFVCNTCPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSP
       .: :.  ..     .:  ::. :  :: .::..... ..:  .  ::.....::: :.. 
XP_006 LTDLKTAFE----RLCRHCPKDWTFFQGNCYFMSNSQRNWHDSVTACQEVRAQLVVIKTA
       200           210       220       230       240       250   

          210         220       230       240          250         
pF1KB6 EEQDFLTKHASHTG--SWIGLRNLDLKGEFIWVDGSHVDYS---NWAPGEPTSRSQGEDC
       :::.::  ..:...  ::.:: .:. .: . ::::: .. :    :  :::.. : .:::
XP_006 EEQNFLQLQTSRSNRFSWMGLSDLNQEGTWQWVDGSPLSPSFQRYWNSGEPNN-SGNEDC
           260       270       280       290       300        310  

     260       270       280       290       300       310         
pF1KB6 VMMRGSGRWNDAFCDRKLGAWVCDQLATCTPPASEGSAESMGPDSRPDPDGRLPTPSAPL
       . . ::: :::  ::   . :.: . :.:                               
XP_006 AEFSGSG-WNDNRCDVD-NYWICKKPAACFRDE                           
             320        330       340                              




321 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 01:13:59 2016 done: Sat Nov  5 01:14:00 2016
 Total Scan time:  8.570 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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