GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:29:27

Sequence gi568815592r:36266648_36485671 : 219024 bp : 45.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3794   4081  288  2  0   61   47   311 0.140  20.66
 1.02 Intr +   4613   4716  104  2  2   83   49   157 0.643  11.12
 1.03 Intr +  24673  24830  158  2  2  127   58   234 0.960  24.03
 1.04 Intr +  26414  26479   66  1  0   96   89    89 0.949   8.90
 1.05 Intr +  27543  27752  210  2  0   81   69   462 0.994  42.71
 1.06 Intr +  28717  28799   83  0  2  101  110    88 0.796  10.74
 1.07 Intr +  31193  31196    4  2  1  117  111     0 0.322  -1.67
 1.08 Intr +  31931  31982   52  1  1  112   48    20 0.272  -1.12
 1.09 Intr +  35214  35411  198  1  0   90   22    96 0.445   2.52
 1.10 Intr +  39645  39729   85  1  1   86  111    61 0.898   7.08
 1.11 Intr +  40940  41065  126  2  0   82   47    95 0.466   4.59
 1.12 Intr +  44614  44798  185  1  2   12  100   111 0.531   4.13
 1.13 Term +  45116  45234  119  0  2  105   45    25 0.546  -1.40
 1.14 PlyA +  48141  48146    6                               1.05

 2.11 PlyA -  49133  49128    6                               1.05
 2.10 Term -  50744  50709   36  2  0  125   48    14 0.252  -1.56
 2.09 Intr -  52963  52709  255  1  0  125   97   205 0.917  22.74
 2.08 Intr -  54572  54508   65  0  2  103  109    80 0.994  10.04
 2.07 Intr -  55795  55664  132  2  0   89   20    66 0.534   0.52
 2.06 Intr -  56886  56646  241  0  1  140   85    30 0.885   5.02
 2.05 Intr -  57543  57482   62  1  2   67   78    66 0.938   1.95
 2.04 Intr -  58767  58636  132  1  0  112   24    67 0.886   3.32
 2.03 Intr -  60106  59863  244  1  1  109   89   110 0.701  10.27
 2.02 Intr -  62067  61910  158  1  2  113   24   153 0.635  11.13
 2.01 Init -  64043  63434  610  2  1   68   72   342 0.931  26.09
 2.00 Prom -  70273  70234   40                              -2.26

 3.00 Prom +  73100  73139   40                              -3.76
 3.01 Init +  96531  96633  103  2  1   60   68    96 0.110   3.20
 3.02 Intr +  96660  96784  125  1  2   43  113   123 0.133  10.60
 3.03 Term +  98036  98152  117  1  0   12   48    90 0.048  -4.06
 3.04 PlyA +  99530  99535    6                               1.05

 4.11 PlyA -  99567  99562    6                               1.05
 4.10 Term - 100115  99998  118  1  1   22   55   108 0.468  -1.09
 4.09 Intr - 100328 100228  101  2  2   84  109   121 0.987  12.71
 4.08 Intr - 102424 102282  143  2  2   79  105   236 0.999  24.47
 4.07 Intr - 104913 104683  231  1  0   93  105   201 0.981  20.04
 4.06 Intr - 106931 106806  126  0  0  107  100   121 0.994  15.85
 4.05 Intr - 109388 109224  165  0  0   61   71   181 0.867  13.63
 4.04 Intr - 119022 118887  136  0  1  115   94    32 0.274   6.64
 4.03 Intr - 120165 119928  238  2  1   76  -32   108 0.226  -4.78
 4.02 Intr - 120707 120588  120  1  0  103   48   101 0.926   7.21
 4.01 Init - 121478 121411   68  2  2   90   47    94 0.982   4.10
 4.00 Prom - 123240 123201   40                              -5.46

 5.04 PlyA - 123934 123929    6                               1.05
 5.03 Term - 129891 129585  307  2  1   79   55   117 0.700   2.09
 5.02 Intr - 133937 133772  166  0  1  100   91    85 0.403   9.02
 5.01 Init - 159318 159267   52  0  1   69  110    18 0.280   3.42
 5.00 Prom - 161972 161933   40                              -3.16

 6.00 Prom + 164530 164569   40                              -3.56
 6.01 Init + 175948 176063  116  0  2   62  102    78 0.398   6.28
 6.02 Intr + 182216 182367  152  2  2   66   73    60 0.212   2.11
 6.03 Intr + 208142 208415  274  0  1   78   88   155 0.655  11.10
 6.04 Intr + 212474 212576  103  2  1   44   70   162 0.916  10.18
 6.05 Intr + 212944 213064  121  0  1   94   80    64 0.999   6.27
 6.06 Intr + 214915 215112  198  2  0  111   19   269 0.985  21.62
 6.07 Intr + 218067 218177  111  1  0  111   93   103 0.997  13.45
 6.08 Term + 218353 218438   86  2  2   88   50    59 0.975  -0.08
 6.09 PlyA + 218535 218540    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_1|559_aa
XKSEAEEMEEQVFKGDPDTPHSISFSGSGFLSFYQAGAVDALRDLAPRMLETAHRFAGTS
AGAVIAALAICGIEMGEACVLGPLGSLLGDSTETEGASLSEKNCYTANPERETLSRTADA
SSSPKEQAQQPNEYLRVLNVGVAEVKKSFLGPLSPSCKMVQMMRQFLYRVLPEDSYKVTT
GKLHALYCSCFVPVYCGLIPPTYRGVRYIDGGFTGMQPCAFWTDAITISTFSGQQDICPR
DCPAIFHDFRMFNCSFQFSLENIARMTHALFPPDLVILHDYYYRGYEDAVLYLRRLSKYR
WGPSLPPATTIPLSVLMILTTLDAVYLNSSSKRVIFPRVEVYCQIELALGNECPERSQPS
LRARQASLEGATQPHKEWVPKGDGRGSHAVALLVSSKPKSAVPLVHVKETVSKPYVTESP
AEDSNWVNKVFKKNKQKTSGTRKGFPRHSGSKKPSSKVQEPGGGVEDEQKLVRLRIRVWE
GIPGTRDGPEQGNSLCKQLTAVARMEVAERPGSELGDVVEGLLPAHSTSLCSPLLRQFGS
PTDLIPAGSRNAALKCGIP

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_1|1680_bp
nnaaagtcagaggccgaggagatggaagaacaggtgttcaagggggacccggacacccct
cactccatctccttctcgggcagtggattcctctccttctaccaggcgggggctgtggac
gccctgcgggacctggccccccggatgctggaaacagcccaccgctttgcggggacatcg
gcaggtgctgtgatcgccgccctggccatctgcgggattgaaatgggtgaggcctgtgtt
ctgggtcccctgggaagtctcttgggggattccacagagacagaaggagcgagcctcagc
gagaagaactgctacactgctaacccagagagagaaacactgtcccggacagcagatgca
tctagcagccccaaggaacaagcccaacagcctaatgagtatctcagagtcctcaacgtg
ggtgtggccgaggtgaagaaatccttcctggggcccttgtccccgtcctgtaagatggtg
cagatgatgaggcagtttctgtaccgggtcctgcccgaggactcctacaaggtcaccacg
gggaagctccatgccctatactgcagctgcttcgtcccggtgtactgtggcctcatcccc
ccgacttaccgcggtgtgaggtacatcgatgggggcttcacgggcatgcagccctgtgcc
ttctggaccgacgccatcaccatctccaccttcagtgggcagcaggacatctgtccccgg
gactgcccggccatcttccacgacttccgcatgttcaactgctccttccagttctccctg
gagaacatcgccaggatgacccacgcattgttccccccggacctggtgatcctgcacgat
tactactaccgagggtacgaggatgcagttttgtacttgaggcggctgagtaagtaccgg
tggggccccagtttgcccccagcaaccaccatcccactttctgtgctgatgattttgact
acactagatgctgtttatcttaattcttcctccaagagagtgattttcccccgggtggaa
gtgtactgccagatagaactcgcccttggcaatgagtgccctgaacgcagtcaaccaagc
cttcgagcacggcaggccagtctggaaggagccacacaacctcacaaggagtgggttccc
aaaggggatggaaggggcagccatgctgtagctcttcttgtctcttcaaaaccaaaaagc
gccgtgcctctggttcatgtgaaggaaaccgtcagcaagccttatgtaacggagagccct
gctgaagactcaaactgggtgaataaggtcttcaagaagaacaagcaaaagacaagtggc
accagaaaaggcttcccaagacattcgggatccaaaaaaccaagcagcaaagtgcaggaa
cctggtggaggtgtggaagatgagcagaagttagtcagactgaggataagggtgtgggag
ggtattccaggcacacgggatggcccagaacaaggaaatagtctatgcaagcagttaact
gcagttgcaaggatggaggtagcggagaggcctggaagtgaacttggagatgtggtggaa
ggtctgctccctgcccactcaacttccctctgctctccacttctgagacagtttgggtca
cctacagacctcatcccagccggatccaggaatgctgccctgaagtgtggaattccttag

>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_2|644_aa
MENPRCPRRPLAEKKARSLDRPQAPGKGSESWDCHWLSLPTAPSRKALHWTTSDWARHSD
SPAPSAEAHCTTAAAPTPEETGDFLPSEQRPSQDTKKGWLKTMLNFFVRTGPEEPREKAS
RRPRGKEGISQHPEPLEAAGEPALRKKAHHDKKPSRKKQGHKKHAAEVTKAAQDQEARGR
EEGLSKAAAALRSGEADLGPARRGGEDSDHQSFLIKVDGTGALDVSPHATGHQQEEELKK
PDRESESLVTFLPVAEQSLASQLGVALPNPAPAVRKKSQEKKTSLKRTSKTNPKKHGSEE
AKRGAADVSSPEAWPPKKSSFLPLCVSGHRPSISSSYGLEEPKVQEAPSTEAGAPGPSVL
PTPSESQEPGEELPLDRASEYKEFIQKIISMLQDAEEQQGEEQPQVQQEEVGVENPAPHC
RRKSQEKRSSFRRAFYHKKHTSKEPRRAGAAGAASPEARRPKRPSFLPLCVGGHRPSTSS
SLDPEDLECREPLPAEGEPVVISEAPSQARGHTPEGAPQLSGACESKEIIIQKLVALLQE
VDGQLGQQIRRHPSFKRFFYEFSDSSLSKLVATLRSQVAHSSKLDRNRARRLYQFDVSLA
NKFAGSNSHAMCILMGLRDHYNCTQFPYREDQPNITSPKVESPD

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_2|1935_bp
atggagaatccaaggtgcccaaggaggcccctggcggagaagaaagccaggtctctggac
aggccgcaggcccccgggaaaggctcggagtcgtgggactgccattggctctccctgccc
actgccccctccaggaaggcgcttcactggacgaccagtgattgggccagacattcagac
agcccagctccatctgcagaggctcactgcaccaccgctgcagcccccactcccgaggag
accggagattttctccccagcgagcagaggccttcgcaagacaccaagaaggggtggctg
aagaccatgctgaacttcttcgtgaggacgggccctgaggagcccagagaaaaggccagc
aggaggccaagggggaaggagggtatctcccagcatccggagcccctggaagcagcaggg
gagccagccctcaggaagaaagcccaccacgacaagaagcccagccgcaagaagcaaggt
cacaagaaacacgcggccgaggtgactaaggcagctcaagaccaggaggccagaggccga
gaggaagggttgtccaaggcagctgctgccttgcgctccggggaggctgacctgggccca
gctcgcaggggtggggaagattctgatcaccagtccttcctcatcaaagtggatggtact
ggagctttggatgtttctccccatgccacaggtcatcagcaagaagaggagctcaaaaag
cctgaccgtgagtcggaatctctagtgacctttttgcctgtggctgagcaatctctggcc
tcacagctgggggtggccctgccaaacccagcaccagctgttaggaagaaatcccaagag
aaaaagacaagcctcaagagaacctcaaagacaaaccccaagaaacacggctccgaggag
gccaagaggggggctgcagatgtttccagtccagaggcctggccacccaagaagtccagc
tttctgcccctgtgtgtcagcggccatcggccttccatctccagcagctatggcttggaa
gaacctaaagtccaggaggccccatctacagaggctggggctccaggtccctccgtgctt
cccaccccatcagagagccaggaacctggagaggagcttccgctggacagagcctcggaa
tacaaagaattcattcagaagatcatttccatgctccaagatgcagaagaacagcaagga
gaggagcaacctcaagtccagcaggaagaggtgggtgtagaaaacccggccccacactgc
agaaggaaatctcaagaaaaaaggtcgagcttcaggagagcgttttaccataagaaacac
acctccaaggaacccagaagagcgggggcagcaggggctgccagcccagaggcccgacga
cccaagaggcccagctttctgcccctgtgtgttggtggccatcggccctccacctccagc
agccttgatccagaagatctcgagtgccgggagcccctgcccgcagaaggggagccagtt
gtgatctcagaagcaccctcccaggctagaggccacacgccagaaggggcacctcagctg
agtggagcatgtgaatctaaggagatcatcatccagaagcttgtggcacttctccaagaa
gtggatggccaactggggcagcagatcaggcgccaccccagctttaagaggtttttttac
gagttctcggactcctccctcagcaagctggtagccaccctgcgcagccaggtggctcac
tcctctaagctggacaggaaccgcgccaggagactctaccagtttgacgttagcttagct
aacaaatttgctggcagcaacagccatgccatgtgcatcctcatgggcctaagagaccac
tacaattgcacccagttcccatacagggaggaccagccgaacatcacaagtcctaaggtt
gaaagtccagattga

>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_3|114_aa
MKPRTLAVSLTALQVAHLEFVLSDVPTCSEFLPSGVKLQTFAVSVTALKAPRLESFVPPR
GLMGSLAPGVKLQTFTCSGGMKGSSSAAKVGAQAEEVPRASEGCEDCQHAVISQ

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_3|345_bp
atgaagccgcggaccctcgcggtgagtcttacagctcttcaggtggcgcatctggagttt
gttctttctgatgttccgacgtgttcagagtttcttccttctggagtgaagctgcagacc
ttcgcggtgagtgttacagcccttaaggcaccgcgtctggagtcgttcgttcctccccgt
gggctcatgggctcgctggctccaggagtgaagctgcagaccttcacgtgcagcggtggg
atgaagggctcctcaagtgccgccaaagtgggagcccaggcagaggaggtgccgagagcg
agcgagggctgtgaggactgccagcacgctgtcatctctcaataa

>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_4|481_aa
MRGPFLSYVRRLTGSFLVLGSGPRGSPPLTLSVSYTALKASRTAPAGPFRSPLTTGRPYT
NQMRQPLRSDYLGNSTKGGPAGNEVRTTRKGVESPFAAAKASGVCFAGSDPNSLSADISP
RIPRDECKAFDNPRVKNDLMELEGELAISPISPVAAMPPLGTHVQARCEAQINLLGEGGI
CKLPGRLRIQPALWSREDVLHWLRWAEQEYSLPCTAEHGFEMNGRALCILTKDDFRHRAP
SSGDVLYELLQYIKTQRRALVCGPFFGGIFRLKTPTQHSPVPPEEVTGPSQMDTRRGHLL
QPPDPGLTSNFGHLDDPGLARWTPGKEESLNLCHCAELGCRTQGVCSFPAMPQAPIDGRI
ADCRLLWDYVYQLLLDTRYEPYIKWEDKDAKIFRVVDPNGLARLWGNHKNRVNMTYEKMS
RALRHYYKLNIIKKEPGQKLLFRFLKTPGKMVQDKHSHLEPLESQEQDRIEFKDKRPEIS
P

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_4|1446_bp
atgcgaggccccttcctatcctatgtgcggagactcacagggtccttcctggtcctgggc
tcgggaccacgcgggtcaccgcccctgactctctcggtgtcatacacagctctgaaggca
tcacgcacagcccctgcgggccctttccgcagcccccttaccactggtcgcccctacacc
aaccagatgaggcaacccctgaggtctgattacttgggaaacagcaccaaagggggaccg
gctggaaatgaagtgagaacgacccggaaaggtgttgaatcccctttcgcagcagccaag
gcttctggagtttgctttgctggctccgatccaaattctctctcggcagatatctctcct
cggatcccaagagatgaatgtaaagcttttgacaatcctagagtgaaaaatgacttgatg
gagctggagggagaattggctatttctcctataagccctgtggcagccatgcctccccta
ggcacccacgtgcaagccagatgtgaagctcaaattaacctgctgggtgaaggggggatc
tgcaagctgccaggaagactccgcatccagcccgcactgtggagcagggaggacgtgctg
cactggctgcgctgggcagagcaggagtactctctgccatgcaccgcggagcacgggttc
gagatgaacggacgcgccctctgcatcctcaccaaggacgacttccggcaccgtgcgccc
agctcaggtgacgtcctgtatgagctgctccagtacatcaagacccagcggcgagccctg
gtgtgtgggcccttttttggagggatcttcaggctgaagacgcccacccagcactctcca
gtccccccggaagaggtgactggcccctctcagatggacacccgaaggggccacctgctg
cagccaccagacccagggcttaccagcaacttcggccacctggatgaccctggcctggca
aggtggacccctggcaaggaggagtccctcaacttatgtcactgtgcagagctcggctgc
aggacccagggggtctgttccttccccgcgatgccgcaggcccccattgacggcaggatc
gctgactgccgcctgctgtgggattacgtgtatcagctgctccttgatacccgatatgag
ccctacatcaagtgggaagacaaggacgccaagatcttccgagttgtggatccaaatggg
ctcgccagactctggggaaatcacaagaaccgggtgaacatgacctacgagaagatgtct
cgtgccctgcgccactattataagcttaatatcattaagaaggaaccggggcagaaactc
ctgttcagatttctaaagactccgggaaagatggtccaggacaagcacagccacctggag
ccgctggagagccaggagcaggacagaatagagttcaaggacaagaggccagaaatctct
ccgtga

>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_5|174_aa
MTQLVSSQPVPAMSRNPDHNLLSQPKEHSIVQKHHQEEIIHKLAMQLRHIGDNIDHRMVR
EVRLQFPQPGPVRNQSASGAMRDSAPTPAQRLEQALGAERGQAVAADTPEPSGVGVGCFL
GPLRVQAAEMPGSCNWEGGHSGTQGAPAPTQKGLGSYWLHGACGPSCTFLLQPA

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_5|525_bp
atgacccaacttgtcagctcccagccagttccagccatgtcaaggaacccagatcataat
ctactttctcagcccaaggagcatagcattgttcagaagcatcaccaggaggaaataatt
cacaagttggccatgcagctgagacacattggggacaacattgatcataggatggttcga
gaggtgaggcttcagtttccccagccagggcctgtcaggaatcaatctgcctccggcgcc
atgcgggactcagccccaacccctgctcagagattggagcaggctctgggagcagagaga
ggccaggcagtggcagcagacacccctgagccttcaggggtaggggtagggtgcttcctg
gggcccctgagggtgcaagctgcagagatgcctgggtcctgcaactgggagggtggccac
agtggcacccagggagctcctgccccaactcagaaggggctgggctcctactggctccat
ggagcatgtggccccagctgcaccttcctgctgcagccagcatga

>gi568815592r:36266648_36485671|GENSCAN_predicted_peptide_6|386_aa
MYIQGSDFRANAFKQLQYSYYATSNLAPRMGRSGFHIFGGFVVLLTSGVKPQTFSVSVTA
LKGGVSGVVCSSRWVRGLADFRSEAADLCNLSLDYASQPANLQFPHIMPLAEDIKGSCFQ
SGNKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLG
RMFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDY
LCINFDFNTIRCQDLSALLHELSNDGAHKQFDHYLEELILPIMVGCAKKGERECHIVVLT
DEDSVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEVE
NGSKQPQKQVRVYYFRIKSSKGKGQW

>gi568815592r:36266648_36485671|GENSCAN_predicted_CDS_6|1161_bp
atgtatatccagggtagtgactttcgagcaaatgcgtttaagcaactccagtattcttac
tacgctacctccaacctcgctccacgcatggggagatcagggttccacattttcggtggg
ttcgtggtcttgctgacttcaggagtgaagccgcagaccttctcagtgagtgttacagct
cttaaaggtggcgtgtctggagttgtttgttcctcccggtgggttcgtggtcttgctgac
ttcaggagtgaagctgcagacctttgcaacctctcacttgactatgcctctcagccagca
aatcttcagttccctcacataatgccccttgctgaagacatcaaaggttcttgcttccaa
agtgggaataaacggaaccatgaaccttttattgctccagaaagatttggaaacagtagt
gtgggctttggcagtaattcccattcccaagcaccagagaaagtgacgcttcttgtagat
ggcacacgttttgttgtgaatccacagattttcactgctcatccggataccatgctggga
aggatgtttggaccaggaagagagtacaacttcactcggcccaatgagaagggagagtat
gagattgctgaaggcatcagtgcaactgtatttcgcacagtgctggattattacaaaacc
ggtatcatcaattgtcctgatggcatctctatcccagatcttagagatacttgtgattat
ctctgcattaattttgacttcaacactatccgatgtcaagatctgagtgctttactccat
gaactgtctaatgacggtgctcataagcagtttgatcactacctcgaagagctcatcttg
cccatcatggtgggctgtgccaagaaaggagaacgagagtgccacattgttgtgctgacg
gatgaggattctgtggactgggatgaagaccaccctccaccaatgggggaggaatattcc
caaattctttatagctccaagctctacagattcttcaaatatattgagaatagggatgtt
gcaaaaacagtgttaaaggaacggggcctaaaaaacattcgcattggaattgaagttgaa
aatggttcaaagcagccacagaaacaagttcgagtttactacttcaggataaagagcagc
aagggcaaaggacagtggtag