GENSCAN 1.0	Date run:  5-Nov-116	Time: 01:03:48

Sequence gi568815581r:43428522_43645617 : 217096 bp : 47.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6811   6828   18  2  0   89  101    23 0.343   0.28
 1.02 Intr +   7624   7659   36  2  0   84   93    20 0.347   0.33
 1.03 Intr +  11440  11534   95  2  2   83   70   102 0.495   7.58
 1.04 Term +  31591  31719  129  0  0  112   38    24 0.027  -2.02
 1.05 PlyA +  34271  34276    6                               1.05

 2.00 Prom +  43505  43544   40                              -4.46
 2.01 Sngl +  47677  48144  468  0  0  110   43   440 0.989  37.83
 2.02 PlyA +  48227  48232    6                               1.05

 3.00 Prom +  51457  51496   40                              -6.96
 3.01 Init +  55517  55664  148  1  1   89   85   223 0.890  22.35
 3.02 Intr +  60928  61013   86  2  2  103   92    73 0.991   8.74
 3.03 Intr +  63662  63807  146  1  2   92   46   184 0.956  13.68
 3.04 Intr +  64160  64519  360  2  0   28   90   278 0.790  16.34
 3.05 Intr +  64924  65068  145  1  1   70  100   110 0.930  10.68
 3.06 Intr +  65162  65365  204  1  0   78   47   259 0.974  20.20
 3.07 Intr +  67660  67747   88  0  1   79   88   156 0.919  14.24
 3.08 Intr +  70341  70438   98  1  2   24  100    34 0.450  -2.07
 3.09 Intr +  71435  71582  148  1  1   64   58    80 0.341   2.41
 3.10 Intr +  76123  76304  182  2  2   95   94   165 0.651  17.39
 3.11 Intr +  78482  78676  195  1  0  119  107   123 0.992  16.91
 3.12 Intr +  78982  79167  186  0  0   91   88   213 0.999  21.49
 3.13 Intr +  79288  79498  211  0  1   72  110   154 0.999  14.49
 3.14 Intr +  79818  79999  182  1  2   60   87   125 0.998   9.19
 3.15 Intr +  84841  84981  141  0  0  127   80   167 0.994  20.35
 3.16 Intr +  88646  88801  156  1  0   70   70    77 0.918   4.31
 3.17 Intr +  91609  91746  138  0  0  129   90   206 0.953  25.56
 3.18 Intr +  92230  92358  129  0  0   91   97    89 0.999  10.99
 3.19 Intr +  92848  93044  197  0  2   72  115   254 0.995  24.71
 3.20 Intr +  93526  93705  180  1  0   62   78   277 0.999  23.08
 3.21 Term +  95107  95326  220  1  1   99   48   333 0.999  26.91
 3.22 PlyA +  98649  98654    6                              -0.45

 4.15 PlyA -  99347  99342    6                               1.05
 4.14 Term - 100222  99998  225  1  0  138   41   220 0.986  19.08
 4.13 Intr - 100715 100614  102  2  0   66   81   184 0.827  15.87
 4.12 Intr - 101155 100983  173  2  2  104   64   178 0.839  16.66
 4.11 Intr - 101461 101363   99  2  0   59   77   134 0.976   9.48
 4.10 Intr - 101660 101586   75  0  0  138   82     0 0.881   3.89
 4.09 Intr - 104418 104153  266  2  2   25  110   192 0.994  12.26
 4.08 Intr - 104827 104666  162  0  0  114   82   105 0.980  11.59
 4.07 Intr - 105464 105338  127  0  1   95   99    88 0.994  10.34
 4.06 Intr - 107958 107905   54  1  0  104   84    42 0.947   4.35
 4.05 Intr - 111154 110974  181  1  1   36   44   145 0.404   4.34
 4.04 Intr - 113355 113240  116  1  2   88   35    18 0.414  -3.33
 4.03 Intr - 116501 116454   48  0  0   97  113    50 0.992   7.05
 4.02 Intr - 116958 116753  206  2  2  113   98   214 0.654  23.74
 4.01 Init - 118703 118630   74  2  2   93   37    37 0.374  -0.35
 4.00 Prom - 119047 119008   40                              -7.66

 5.00 Prom + 122228 122267   40                              -6.66
 5.01 Init + 127909 128090  182  0  2   74   96   137 0.945   9.76
 5.02 Intr + 129312 129342   31  0  1   95  101    20 0.848   2.13
 5.03 Intr + 154971 155183  213  2  0  116   68   136 0.822  13.31
 5.04 Intr + 186173 186374  202  1  1   70   51    83 0.511   1.66
 5.05 Intr + 186709 186789   81  2  0   90   86    17 0.523   1.31
 5.06 Intr + 193463 193612  150  0  0   83   15    86 0.096   0.93
 5.07 Term + 199987 200069   83  2  2   84   55    84 0.248   2.56
 5.08 PlyA + 200740 200745    6                               1.05

 6.03 PlyA - 202428 202423    6                               1.05
 6.02 Term - 213511 213389  123  1  0  125   50    85 0.433   6.78
 6.01 Intr - 215139 214967  173  1  2   89   85   275 0.998  26.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_1|92_aa
XRLYQHVVLNFGYKLGLPEALSWSLMVPFVWTVDIMIVGMQIPWPYTGSLALGEAPPSAK
VPFSKKHPLPTASKIGFPPPTPQQLSSLGAET

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_1|279_bp
naaaggctgtaccagcatgtggttctcaactttggctacaagttaggattacctgaggct
ctttcctggtccttgatggtcccctttgtgtggactgtggacatcatgattgttggaatg
cagattccatggccctacaccggatccctggctcttggagaggctccaccttcagctaaa
gttcctttctcaaagaagcatcccctgcccactgcttctaaaataggattcccacctcca
accccacaacaactgtcatctctaggagctgaaacataa

>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_2|155_aa
MAKSKNHSTNNQSRKRHRNGIKKPRSRRYESLKGMDPKFPRNMCFAKKQNKKVLKKMQAN
SDKAMSARAEVIKALVKPKEVKLKIPKGVSCKLDRLAYIAHPKLGKRARARIAKGLRLCW
PKAKAKDQTKAQAAAPASVPAQAPKGAQAPTKASE

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_2|468_bp
atggccaagtccaagaaccacagcacaaacaaccagtcccgaaaaaggcacagaaatggt
atcaagaaaccccgatcacgaagatatgaatctcttaaggggatggaccccaagttcccg
aggaacatgtgctttgccaagaagcaaaacaagaaggtcctaaagaagatgcaggccaac
agtgacaaggccatgagtgcacgtgctgaggttatcaaggccctcgtaaagcccaaggag
gttaagctcaagatcccaaagggtgtcagctgcaagctcgatcgacttgcctacattgcc
caccccaagcttgggaagcgggctcgtgcccgcattgccaaggggctcaggctgtgctgg
ccaaaggccaaggccaaggatcaaaccaaggcccaggctgcagctccagcttcagttcca
gctcaggctcccaaaggtgcccaggcccctacaaaggcttcagagtag

>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_3|1179_aa
MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRFVLSV
LSFGSLGDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSR
YRSRSRSQSPPKDRKDRDKYGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCF
VQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQE
TGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWE
IKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSP
IKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQI
AANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDN
QILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQE
VGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLL
KKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL
ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ
TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ
AQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLL
SFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGC
SEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPW
CYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQ
EGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFF
KVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_3|3540_bp
atggctgtggctgtagccatggcgggagccttaatcgggtcggagccaggccccgcggaa
gaacttgccaaactcgagtacctgtctttggtgtcaaaggtttgcactgagctggacaat
cacttggggatcaacgacaaggaccttgctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaggcttctctcgtcaaaaatggtgcagaatttacgaccatg
ttggatgaagatgatgtgaaagttgctgtggatgtcctgaaagaactggaagctttaatg
cccagcgcagcaggccaggagaagcaaagagatgctgaacaccggtttgtccttagtgtc
ctgtcctttggaagtttaggggacaggacaaagaagaagaagcggagtcgaagccgagat
cgaaaccgagatcgagacagagatagggaacgaaaccgagatagagaccacaagcggaga
caccgatcccgctctcgatcacgttccaggacccgggagaggaataaagtgaagtctaga
tatcggtccaggagcaggagtcagagtccccccaaagaccggaaggaccgggacaaatat
ggagagcggaatctggatagatggcgggataagcatgtggaccgccctcctccagaagag
cccaccattggtgacatttataatggcaaagttaccagcatcatgcagtttggttgcttt
gtgcagctggaaggactaaggaagcggtgggaaggcctggtgcacatctctgagctccgg
cgggagggtcgtgtggccaatgtagctgatgtcgtgagcaaaggccagagggtcaaagtc
aaagtgctgtccttcactgggaccaagaccagcctgagcatgaaggatgtggatcaagag
actggagaagatctaaacccaaatagacggcgaaatcttgtcggggagaccaatgaggag
acctcaatgcggaatcctgatagacccactcacttgtcccttgtcagtgctcctgaagta
gaggacgactcactggaacgcaagcgcctcacccgaatctctgacccagagaagtgggag
atcaaacagatgattgctgccaatgtcctttccaaagaagaatttccagactttgatgaa
gagactggcattctccctaaggtggatgatgaagaagatgaggaccttgagattgaattg
gttgaggaagagcctccattcctgagagggcacactaagcaaagcatggacatgagcccc
attaaaattgtcaagaacccagacggctccctctcccaagcagcaatgatgcagagtgcc
ttggccaaagaaaggcgggaactcaaacaggcccagcgggaagctgagatggattctatt
cccatgggactcaacaaacactgggttgaccctctgcctgatgcggaaggcagacagatt
gctgccaacatgaggggtattgggatgatgcccaatgatattcctgagtggaagaagcat
gcctttgggggcaacaaagcctcttacggaaaaaagacccagatgtcaatccttgagcag
agggagagcctgcccatctacaaactgaaggagcaattggtccaggccgtccatgacaat
cagatcctgattgtcattggtgagacaggatctggaaagacaacacagatcacccagtac
ctggcggaggcaggctacacttccaggggcaagattgggtgtacccagcccagaagagtg
gcagctatgtcggtggccaaaagagtgtcagaggagtttggttgttgcttaggccaagag
gtgggctacaccattcgatttgaggactgcactagccctgaaacagtcatcaagtacatg
acagatgggatgttgcttagagagtgcttgattgaccctgacctcactcagtacgcgatc
atcatgttggacgaggcacatgagaggacaattcacactgatgtgctctttggattgttg
aaaaagacagttcagaaacggcaggacatgaagctgattgtcacctcagccaccttggat
gcagtgaagttttctcaatacttctatgaagctcccattttcaccatcccaggtcgaaca
tatccagtggaaatactgtacacaaaggaacctgagacagattatctggatgccagcctg
attactgttatgcagattcatttaacagaaccaccaggtgatatcctggtcttcctgact
ggtcaggaagaaattgatactgcttgtgagatcctgtatgaaagaatgaaatccctggga
cctgatgttccagagttaattatcctcccagtgtactctgctcttcccagtgagatgcag
acccgaatctttgacccagctccaccaggcagcagaaaggttgtgattgccaccaatatc
gcagagacatcgctgactattgatggtatctactatgtggtggacccaggattcgtgaaa
cagaaagtttacaattccaagacagggattgaccagctcgtggtgacgcctatttctcag
gctcaggcaaagcaacgagctggcagagctgggagaacaggcccagggaagtgttacagg
ttgtacacagaacgtgcctaccgagatgaaatgctgaccaccaacgtgccggaaatccag
agaaccaacttagcaagcacagtgctgtcactcaaggccatgggtatcaatgatctgctg
tcctttgatttcatggatgccccacctatggaaactttgatcacagccatggagcagctg
tacacactgggggccctggatgacgagggcctgctcactcgcttgggccgccggatggca
gagttccctctggagccaatgctatgcaaaatgctcatcatgtctgtgcatctgggctgc
agtgaggaaatgctgaccattgtatccatgctgtctgtgcagaacgtcttctataggccc
aaggataaacaagcccttgcagatcagaagaaggccaaattccaccagactgaaggggac
cacctcaccctgctagctgtgtacaactcctggaagaacaacaagttctccaacccatgg
tgctatgagaactttatccaggctcgttccctgcgccgggcccaggacattcgcaagcag
atgttaggcataatggacagacacaagctggatgttgtttcctgtggcaagtccacagtc
cgagtgcagaaggccatctgcagtgggttcttccgtaatgctgccaagaaagacccgcag
gagggttaccggacactgatcgaccagcaggtggtctatatccatccttccagtgccctc
ttcaacagacagccagaatgggtggtgtaccatgagctggtgctcaccaccaaggaatac
atgcgtgaagttaccaccatcgaccctcggtggcttgtggagtttgccccagccttcttc
aaggtctcagacccaactaagctaagcaaacagaagaagcaacagcgtcttgaacccttg
tacaaccgctatgaggaacccaatgcctggagaatatctcgagctttccgacggcgctga

>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_4|635_aa
MAERELHFRKSSTLGLLVSAAISRNPSGVLGCPAPESPEDPNLVPQTKRLRVTRGHSPRF
SQKSPGNGSLREALIGPLGKLMDPGSLPPLDSEDLFQDLSHFQETWLAEATMPPSPSFCL
FPFLKTLGDKYVPSTTSELVPSSTEAARAHSADFCQPEDKRLLHVYSCSQEITALSVYSN
PVLGAGASDDKKDKALALTELNFLVEEIAQVPDSDEQFVPDFHSENLAFHSPTTRIKKEP
QSPRTDPALSCSRKPPLPYHHGEQCLYSSAYDPPRQIAIKSPAPGALGQSPLQPFPRAEQ
RNFLRSSGTSQPHPGHGYLGEHSSVFQQPLDICHSFTSQGGGREPLPAPYQHQLSEPCPP
YPQQSFKQEYHDPLYEQAGQPAVDQGGVNGHRYPGAGVVIKQEQTDFAYDSDVTGCASMY
LHTEGFSGPSPGDGAMDLSNPQFPPQGYGYEKPLRPFPDDVCVVPEKFEGDIKQEGVGAF
REGPPYQRRGALQLWQFLVALLDDPTNAHFIAWTGRGMEFKLIEPEEVARLWGIQKNRPA
MNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCEPEALFSLAFPDNQRPALKAEFDRPVS
EEDTVPLSHLDESPAYLPELAGPAQPFGPKGGYSY

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_4|1908_bp
atggctgagagggagctacactttcggaaatcatctaccctggggcttctggtttctgct
gcaatcagtagaaatcccagcggagtcctgggctgccccgcccctgagtcacccgaggac
cccaacctcgtcccccagactaagcgcctcagggtgactcgcgggcattctccccgcttc
tcgcagaaatcgcccggaaatgggagcttgcgcgaagcgctgatcggcccgctggggaag
ctcatggacccgggctccctgccgcccctcgactctgaagatctcttccaggatctaagt
cacttccaggagacgtggctcgctgaagctacaatgcctccttctccatctttctgtctc
ttccccttcctgaagactcttggggacaaatatgtcccctccacaactagtgaactggtt
ccttccagtacagaggctgccagggcccacagtgctgacttctgccagcctgaggacaaa
cgattattgcatgtttattcatgtagtcaagaaataacagcactgagcgtctactctaac
cctgtgctgggtgctggggcatcagatgacaaaaaagataaagctcttgccctcacagag
cttaacttcctggtggaggagatagctcaggtaccagacagtgatgagcagtttgttcct
gatttccattcagaaaacctagctttccacagccccaccaccaggatcaagaaggagccc
cagagtccccgcacagacccggccctgtcctgcagcaggaagccgccactcccctaccac
catggcgagcagtgcctttactccagtgcctatgacccccccagacaaatcgccatcaag
tcccctgcccctggtgcccttggacagtcgcccctacagccctttccccgggcagagcaa
cggaatttcctgagatcctctggcacctcccagccccaccctggccatgggtacctcggg
gaacatagctccgtcttccagcagcccctggacatttgccactccttcacatctcaggga
gggggccgggaacccctcccagccccctaccaacaccagctgtcggagccctgcccaccc
tatccccagcagagctttaagcaagaataccatgatcccctgtatgaacaggcgggccag
ccagccgtggaccagggtggggtcaatgggcacaggtacccaggggcgggggtggtgatc
aaacaggaacagacggacttcgcctacgactcagatgtcaccgggtgcgcatcaatgtac
ctccacacagagggcttctctgggccctctccaggtgacggggccatggatctgagcaac
ccccaatttcctccacaaggctatggctatgagaaacctctgcgaccattcccagatgat
gtctgcgttgtccctgagaaatttgaaggagacatcaagcaggaaggggtcggtgcattt
cgagaggggccgccctaccagcgccggggtgccctgcagctgtggcaatttctggtggcc
ttgctggatgacccaacaaatgcccatttcattgcctggacgggccggggaatggagttc
aagctcattgagcctgaggaggtcgccaggctctggggcatccagaagaaccggccagcc
atgaattacgacaagctgagccgctcgctccgatactattatgagaaaggcatcatgcag
aaggtggctggtgagcgttacgtgtacaagtttgtgtgtgagcccgaggccctcttctct
ttggccttcccggacaatcagcgtccagctctcaaggctgagtttgaccggcctgtcagt
gaggaggacacagtccctttgtcccacttggatgagagccccgcctacctcccagagctg
gctggccccgcccagccatttggccccaagggtggctactcttactag

>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_5|313_aa
MTFLIYEVVLAALIWVLWGGGFEFLGAQSAVAIGRKGPTFLGREVELPLKEAEGGCQKRE
GEPALSFSFVNNLSKELSTLTASTSSPPMDSSTRFPPFHGNDLWFNEVQTLVNFEIALAK
VINGQLVFKLRLGSCPHALLALGWKDSENSKDIKQIHNGLSSINMSQVQTEMPQAPTWFN
ENIHQLCLCSHFTNKQGGEMDSEIVPGEPARFASSVKRGNNPRPVSPHDRKGSLRQGSSA
LMLYLGLIARESGLDGSPEHIKHCPLPRCSDCSSCHGDKDIFFLFQRWASEQSRQIETFS
AGQLASAGRSDPS

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_5|942_bp
atgacctttctgatttacgaggtggtgctggctgcactcatttgggttctgtggggaggt
ggctttgagttcctcggggcccagtctgcagtggctattgggagaaaaggccccaccttc
ctgggcagagaagtggagcttccacttaaagaggcagaaggaggctgtcagaagagggaa
ggggaaccagcgctctccttcagctttgtcaataacttatcgaaggagctgtccacactc
actgcctccacttcctcacctcccatggattcctcaactcgctttccacccttccatgga
aatgatctgtggtttaatgaggtgcagactttggtcaattttgaaattgctcttgctaaa
gtcatcaatggccaacttgtcttcaaactacggcttggttcttgtcctcatgctcttctc
gctctgggatggaaggactcggagaattcgaaggatattaaacagattcataatggactc
agcagtataaacatgtctcaagtgcagacagaaatgccacaagctcctacttggtttaat
gaaaacatacaccagttgtgtctgtgttcccattttacaaataaacaaggtggggagatg
gactcggaaattgtccctggggagccagccaggtttgcctcatctgtgaaacggggtaac
aatcccagacctgtgtcgccgcatgatcgcaagggctctctgagacaagggagctcggct
ctaatgctgtacctgggcctcattgccagagagtctggtttagatgggtccccagagcac
attaagcactgtcctctgccaaggtgctcagactgcagctcctgtcatggggacaaggat
atcttcttcctgttccagagatgggccagcgagcagtctagacagatagagaccttcagt
gctggccagctggcttctgctggcaggtcggacccgtcgtga

>gi568815581r:43428522_43645617|GENSCAN_predicted_peptide_6|98_aa
XNQENRGKPEGSSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVK
VWFQNRRMKWKRVKGGQPISPNGQDPEDGDSTASPSSE

>gi568815581r:43428522_43645617|GENSCAN_predicted_CDS_6|297_bp
nacaaccaggagaacagagggaagccggagggcagcagcaaagcccgcaaggagaggacg
gccttcaccaaggagcagctgcgagagctggaggcagagtttgcccatcataactacctg
actcggctccgcagatatgagattgcggtaaacctggacctctctgagcgccaggtcaaa
gtgtggttccagaaccgaaggatgaagtggaagcgtgtgaagggaggtcagcccatctcc
cccaatgggcaggaccctgaggatggggactccacagcctctccaagttcagagtga