Result of FASTA (omim) for pF1KB8348
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8348, 479 aa
  1>>>pF1KB8348 479 - 479 aa - 479 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.3937+/-0.000339; mu= 9.5276+/- 0.021
 mean_var=141.4644+/-28.884, 0's: 0 Z-trim(119.5): 152  B-trim: 1959 in 2/54
 Lambda= 0.107833
 statistics sampled from 33423 (33577) to 33423 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.394), width:  16
 Scan time:  9.720

The best scores are:                                      opt bits E(85289)
NP_891548 (OMIM: 165080) transcriptional regulator ( 479) 3340 531.0 2.8e-150
NP_001230357 (OMIM: 165080) transcriptional regula ( 486) 3322 528.2  2e-149
NP_001129626 (OMIM: 165080) transcriptional regula ( 486) 3322 528.2  2e-149
NP_001129627 (OMIM: 165080) transcriptional regula ( 387) 2726 435.4 1.3e-121
NP_001230361 (OMIM: 165080) transcriptional regula ( 317) 2099 337.8 2.6e-92
XP_016883776 (OMIM: 165080) PREDICTED: transcripti ( 459) 1805 292.2 2.1e-78
XP_011527789 (OMIM: 165080) PREDICTED: transcripti ( 259) 1672 271.3 2.2e-72
NP_001278320 (OMIM: 165080) transcriptional regula ( 325) 1672 271.4 2.6e-72
NP_001230358 (OMIM: 165080) transcriptional regula ( 363) 1650 268.0 3.1e-71
XP_016883778 (OMIM: 165080) PREDICTED: transcripti ( 428) 1650 268.1 3.5e-71
XP_011527788 (OMIM: 165080) PREDICTED: transcripti ( 435) 1650 268.1 3.6e-71
NP_001317954 (OMIM: 165080) transcriptional regula ( 455) 1650 268.1 3.7e-71
NP_004440 (OMIM: 165080) transcriptional regulator ( 462) 1650 268.1 3.8e-71
NP_001257939 (OMIM: 193067) Friend leukemia integr ( 386) 1274 209.5 1.3e-53
XP_016872894 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 1274 209.6 1.4e-53
NP_001161153 (OMIM: 193067) Friend leukemia integr ( 419) 1274 209.6 1.4e-53
XP_011541003 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 1274 209.6 1.4e-53
XP_016872895 (OMIM: 193067) PREDICTED: Friend leuk ( 419) 1274 209.6 1.4e-53
NP_002008 (OMIM: 193067) Friend leukemia integrati ( 452) 1274 209.6 1.5e-53
NP_001257941 (OMIM: 193067) Friend leukemia integr ( 259) 1267 208.3   2e-53
XP_011541004 (OMIM: 193067) PREDICTED: Friend leuk ( 410) 1171 193.5 9.2e-49
NP_059991 (OMIM: 607150) protein FEV [Homo sapiens ( 238)  611 106.3   1e-22
NP_001317380 (OMIM: 164720) protein C-ets-1 isofor ( 354)  599 104.5   5e-22
XP_016872806 (OMIM: 164720) PREDICTED: protein C-e ( 398)  599 104.5 5.5e-22
XP_011540953 (OMIM: 164720) PREDICTED: protein C-e ( 432)  599 104.6 5.9e-22
XP_005260992 (OMIM: 164740) PREDICTED: protein C-e ( 469)  453 81.9 4.3e-15
XP_016883779 (OMIM: 164740) PREDICTED: protein C-e ( 469)  453 81.9 4.3e-15
NP_005230 (OMIM: 164740) protein C-ets-2 isoform 1 ( 469)  453 81.9 4.3e-15
NP_001243224 (OMIM: 164740) protein C-ets-2 isofor ( 609)  453 81.9 5.3e-15
NP_001155894 (OMIM: 164720) protein C-ets-1 isofor ( 225)  445 80.4 5.7e-15
XP_016872805 (OMIM: 164720) PREDICTED: protein C-e ( 418)  445 80.6 9.4e-15
NP_005229 (OMIM: 164720) protein C-ets-1 isoform 2 ( 441)  445 80.6 9.8e-15
XP_016872804 (OMIM: 164720) PREDICTED: protein C-e ( 450)  445 80.6 9.9e-15
XP_011540952 (OMIM: 164720) PREDICTED: protein C-e ( 475)  445 80.6   1e-14
NP_001137292 (OMIM: 164720) protein C-ets-1 isofor ( 485)  445 80.6 1.1e-14
XP_016872803 (OMIM: 164720) PREDICTED: protein C-e ( 485)  445 80.6 1.1e-14
XP_011540951 (OMIM: 164720) PREDICTED: protein C-e ( 519)  445 80.7 1.1e-14
XP_016883802 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  408 74.9 5.4e-13
XP_011527823 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  408 74.9 5.4e-13
XP_011527822 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  408 74.9 5.4e-13
NP_002031 (OMIM: 600609) GA-binding protein alpha  ( 454)  408 74.9 5.4e-13
XP_005260995 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  408 74.9 5.4e-13
NP_001184226 (OMIM: 600609) GA-binding protein alp ( 454)  408 74.9 5.4e-13
NP_006485 (OMIM: 600775,611888) ETS domain-contain ( 548)  407 74.8   7e-13
NP_001156619 (OMIM: 600541) ETS translocation vari ( 454)  405 74.4 7.5e-13
NP_005231 (OMIM: 164873) ETS translocation variant ( 143)  390 71.7 1.5e-12
XP_011524926 (OMIM: 609358) PREDICTED: ETS translo ( 249)  394 72.5 1.5e-12
NP_001287903 (OMIM: 609358) ETS translocation vari ( 249)  394 72.5 1.5e-12
NP_055024 (OMIM: 609358) ETS translocation variant ( 342)  394 72.6   2e-12
XP_016881961 (OMIM: 609358) PREDICTED: ETS translo ( 343)  394 72.6   2e-12


>>NP_891548 (OMIM: 165080) transcriptional regulator ERG  (479 aa)
 initn: 3340 init1: 3340 opt: 3340  Z-score: 2819.1  bits: 531.0 E(85289): 2.8e-150
Smith-Waterman score: 3340; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)

               10        20        30        40        50        60
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
              370       380       390       400       410       420

              430       440       450       460       470         
pF1KB8 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_891 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
              430       440       450       460       470         

>>NP_001230357 (OMIM: 165080) transcriptional regulator   (486 aa)
 initn: 3322 init1: 3322 opt: 3322  Z-score: 2803.8  bits: 528.2 E(85289): 2e-149
Smith-Waterman score: 3322; 99.6% identity (99.8% similar) in 478 aa overlap (2-479:9-486)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
              250       260       270       280       290       300

           300       310       320       330       340       350   
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
              310       320       330       340       350       360

           360       370       380       390       400       410   
pF1KB8 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
              370       380       390       400       410       420

           420       430       440       450       460       470   
pF1KB8 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
              430       440       450       460       470       480

             
pF1KB8 HLGTYY
       ::::::
NP_001 HLGTYY
             

>>NP_001129626 (OMIM: 165080) transcriptional regulator   (486 aa)
 initn: 3322 init1: 3322 opt: 3322  Z-score: 2803.8  bits: 528.2 E(85289): 2e-149
Smith-Waterman score: 3322; 99.6% identity (99.8% similar) in 478 aa overlap (2-479:9-486)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
              250       260       270       280       290       300

           300       310       320       330       340       350   
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
              310       320       330       340       350       360

           360       370       380       390       400       410   
pF1KB8 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
              370       380       390       400       410       420

           420       430       440       450       460       470   
pF1KB8 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
              430       440       450       460       470       480

             
pF1KB8 HLGTYY
       ::::::
NP_001 HLGTYY
             

>>NP_001129627 (OMIM: 165080) transcriptional regulator   (387 aa)
 initn: 2726 init1: 2726 opt: 2726  Z-score: 2304.2  bits: 435.4 E(85289): 1.3e-121
Smith-Waterman score: 2726; 100.0% identity (100.0% similar) in 387 aa overlap (93-479:1-387)

             70        80        90       100       110       120  
pF1KB8 RVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
                                     ::::::::::::::::::::::::::::::
NP_001                               MVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
                                             10        20        30

            130       140       150       160       170       180  
pF1KB8 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
               40        50        60        70        80        90

            190       200       210       220       230       240  
pF1KB8 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
              100       110       120       130       140       150

            250       260       270       280       290       300  
pF1KB8 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
              160       170       180       190       200       210

            310       320       330       340       350       360  
pF1KB8 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
              220       230       240       250       260       270

            370       380       390       400       410       420  
pF1KB8 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
              280       290       300       310       320       330

            430       440       450       460       470         
pF1KB8 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
              340       350       360       370       380       

>>NP_001230361 (OMIM: 165080) transcriptional regulator   (317 aa)
 initn: 2098 init1: 2098 opt: 2099  Z-score: 1778.2  bits: 337.8 E(85289): 2.6e-92
Smith-Waterman score: 2099; 98.7% identity (99.0% similar) in 309 aa overlap (2-310:9-317)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
              250       260       270       280       290       300

           300       310       320       330       340       350   
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
       ::::::::::::::  :                                           
NP_001 QILGPTSSRLANPGWTQ                                           
              310                                                  

>>XP_016883776 (OMIM: 165080) PREDICTED: transcriptional  (459 aa)
 initn: 3118 init1: 1801 opt: 1805  Z-score: 1528.7  bits: 292.2 E(85289): 2.1e-78
Smith-Waterman score: 3067; 93.7% identity (93.9% similar) in 478 aa overlap (2-479:9-459)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::                            ::::::::
XP_016 DDFQRLTPSYNADILLSHLHYLRER---------------------------GAAFIFPN
              190       200                                  210   

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
           220       230       240       250       260       270   

           300       310       320       330       340       350   
pF1KB8 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QILGPTSSRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGE
           280       290       300       310       320       330   

           360       370       380       390       400       410   
pF1KB8 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPS
           340       350       360       370       380       390   

           420       430       440       450       460       470   
pF1KB8 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLPYMGSYHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPS
           400       410       420       430       440       450   

             
pF1KB8 HLGTYY
       ::::::
XP_016 HLGTYY
             

>>XP_011527789 (OMIM: 165080) PREDICTED: transcriptional  (259 aa)
 initn: 1672 init1: 1672 opt: 1672  Z-score: 1420.5  bits: 271.3 E(85289): 2.2e-72
Smith-Waterman score: 1672; 99.2% identity (99.6% similar) in 247 aa overlap (2-248:9-255)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       :::::::::::::::                                             
XP_011 TSVYPEATQRITTRPVSYR                                         
              250                                                  

>>NP_001278320 (OMIM: 165080) transcriptional regulator   (325 aa)
 initn: 1672 init1: 1672 opt: 1672  Z-score: 1419.1  bits: 271.4 E(85289): 2.6e-72
Smith-Waterman score: 1672; 99.2% identity (99.6% similar) in 247 aa overlap (2-248:9-255)

                      10        20        30        40        50   
pF1KB8        MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               :. :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIQTVPDPAAHIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQ
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDWLSQPPARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHM
               70        80        90       100       110       120

           120       130       140       150       160       170   
pF1KB8 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTK
              130       140       150       160       170       180

           180       190       200       210       220       230   
pF1KB8 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPN
              190       200       210       220       230       240

           240       250       260       270       280       290   
pF1KB8 TSVYPEATQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPY
       :::::::::::::::                                             
NP_001 TSVYPEATQRITTRPGTKTPLCDLFIERHPRCPAEIRALSHVIQRELIPELKPVPDSLIL
              250       260       270       280       290       300

>>NP_001230358 (OMIM: 165080) transcriptional regulator   (363 aa)
 initn: 2553 init1: 1650 opt: 1650  Z-score: 1399.9  bits: 268.0 E(85289): 3.1e-71
Smith-Waterman score: 2509; 93.8% identity (93.8% similar) in 387 aa overlap (93-479:1-363)

             70        80        90       100       110       120  
pF1KB8 RVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
                                     ::::::::::::::::::::::::::::::
NP_001                               MVGSPDTVGMNYGSYMEEKHMPPPNMTTNE
                                             10        20        30

            130       140       150       160       170       180  
pF1KB8 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS
               40        50        60        70        80        90

            190       200       210       220       230       240  
pF1KB8 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQ
       ::::::::::::::::::::::::::::::::::::::::::                  
NP_001 YNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNT------------------
              100       110       120       130                    

            250       260       270       280       290       300  
pF1KB8 RITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ------DLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSR
                  140       150       160       170       180      

            310       320       330       340       350       360  
pF1KB8 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNY
        190       200       210       220       230       240      

            370       380       390       400       410       420  
pF1KB8 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGSYH
        250       260       270       280       290       300      

            430       440       450       460       470         
pF1KB8 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
        310       320       330       340       350       360   

>>XP_016883778 (OMIM: 165080) PREDICTED: transcriptional  (428 aa)
 initn: 1650 init1: 1650 opt: 1650  Z-score: 1398.9  bits: 268.1 E(85289): 3.5e-71
Smith-Waterman score: 2881; 89.1% identity (89.4% similar) in 479 aa overlap (1-479:1-428)

               10        20        30        40        50        60
pF1KB8 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASTIKEALSVVSEDQSLFECAYGTPHLAKTEMTASSSSDYGQTSKMSPRVPQQDWLSQP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PARVTIKMECNPSQVNGSRNSPDECSVAKGGKMVGSPDTVGMNYGSYMEEKHMPPPNMTT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 PSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEA
       :::::::::::::::::                                           
XP_016 PSYNADILLSHLHYLRE-------------------------------------------
              190                                                  

              250       260       270       280       290       300
pF1KB8 TQRITTRPDLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
               .:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 --------NLPYEPPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTS
               200       210       220       230       240         

              310       320       330       340       350       360
pF1KB8 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRLANPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNM
     250       260       270       280       290       300         

              370       380       390       400       410       420
pF1KB8 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPPESSLYKYPSDLPYMGS
     310       320       330       340       350       360         

              430       440       450       460       470         
pF1KB8 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YHAHPQKMNFVAPHPPALPVTSSSFFAAPNPYWNSPTGGIYPNTRLPTSHMPSHLGTYY
     370       380       390       400       410       420        




479 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 02:10:57 2016 done: Sat Nov  5 02:10:59 2016
 Total Scan time:  9.720 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com