GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:04:34

Sequence gi568815586r:89249257_89452039 : 202783 bp : 40.17% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    108    162   55  2  1   89   75    38 0.661   4.10
 1.02 Intr +   4636   4687   52  2  1  115   75    32 0.748   1.65
 1.03 Intr +   5913   6099  187  0  1   19   66   148 0.339   4.47
 1.04 Term +   9069   9218  150  2  0   14   55   143 0.588   0.53
 1.05 PlyA +   9222   9227    6                               1.05

 2.00 Prom +  30501  30540   40                              -4.55
 2.01 Init +  47437  47659  223  0  1   64   66   224 0.381  16.56
 2.02 Intr +  60297  60386   90  1  0   92   10   111 0.022   2.75
 2.03 Intr +  74039  74290  252  0  0   95   77   102 0.801   6.28
 2.04 Term +  74353  74462  110  2  2   96   43    58 0.693  -0.21
 2.05 PlyA +  74695  74700    6                               1.05

 3.08 PlyA -  74942  74937    6                               1.05
 3.07 Term -  76354  76268   87  1  0   92   49    84 0.004   1.58
 3.06 Intr -  90466  90389   78  1  0   53   92    62 0.011   1.93
 3.05 Intr -  95527  95450   78  1  0  141   90    15 0.033   5.83
 3.04 Intr - 100305 100022  284  1  2  100   43   255 0.081  18.41
 3.03 Intr - 101769 101332  438  1  0  109   66   358 0.998  28.26
 3.02 Intr - 102793 102384  410  0  2   81  107   740 0.578  68.19
 3.01 Init - 105116 104965  152  2  2   89   44   102 0.543   3.54
 3.00 Prom - 110660 110621   40                              -7.25

 4.00 Prom + 116676 116715   40                              -0.25
 4.01 Init + 119595 119628   34  2  1   45   94    45 0.163   0.88
 4.02 Intr + 120394 120452   59  2  2   97   84   -14 0.033  -3.22
 4.03 Intr + 123544 123630   87  0  0   69  101    55 0.075   4.15
 4.04 Intr + 138086 138203  118  1  1   49   92   105 0.020   6.12
 4.05 Term + 142911 143080  170  1  2   84   52   113 0.960   4.36
 4.06 PlyA + 143202 143207    6                               1.05

 5.00 Prom + 143624 143663   40                              -3.75
 5.01 Init + 149463 149469    7  2  1   64  116     0 0.429   1.54
 5.02 Intr + 151280 151339   60  0  0   95   84   108 0.392   8.89
 5.03 Intr + 160440 160617  178  1  1   13   72   130 0.014   1.96
 5.04 Intr + 160933 161142  210  1  0   35   58   122 0.637   1.01
 5.05 Term + 162457 162556  100  1  1  100   34   103 0.584   2.72
 5.06 PlyA + 162676 162681    6                               1.05

 6.04 PlyA - 164250 164245    6                               1.05
 6.03 Term - 172001 171897  105  2  0  103   42    98 0.825   4.13
 6.02 Intr - 176038 175905  134  2  2   55   80   113 0.812   6.64
 6.01 Init - 180826 180679  148  1  1  113   15    84 0.757   3.90
 6.00 Prom - 180914 180875   40                              -4.55

 7.00 Prom + 182284 182323   40                              -8.15
 7.01 Sngl + 193763 194710  948  1  0   55   38   414 0.869  29.41
 7.02 PlyA + 195099 195104    6                               1.05

 8.02 PlyA - 197059 197054    6                               1.05
 8.01 Term - 202683 202556  128  1  2   71   37   113 0.763   1.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  78598  78670   73  0  1   69   88    75 0.958   6.88
S.002 Term +  79298  79380   83  0  2  131   42    58 0.961   2.38
S.003 Term - 100305  99998  308  1  2  100   48   284 0.916  19.89
S.004 Init + 141850 141952  103  0  1   58   78   111 0.918   7.55
S.005 Init + 160454 160617  164  1  2   70   72   106 0.922   6.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_1|147_aa
MDIKMGTIDPGDYYREEGASTHQSSTETPGLFLKQRNTPDWVIDKEKGLIGLWFGRLHQK
LSGICFGEGLRKLTAMAEGEEAAGASHGKRGSKRESEEKRRLGHRYTQREDSMKTQEENG
HLQGRKEVSAEINPADTLILDFQPPEL

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_1|444_bp
atggacataaagatgggaacaatagatcctggggactactacagggaggagggagcatca
acccatcaatcttccacagagacaccagggcttttcctgaaacagaggaataccccagac
tgggtaattgataaagaaaaaggtttaattggcttatggttcggcaggctgcaccaaaag
ctgagtggtatctgctttggtgaaggcctcaggaagcttacagccatggcagaaggtgaa
gaagcagcaggtgcatcacatggcaagagagggagtaagagagagagtgaggagaagagg
agattaggacacagatacacgcagagggaggacagtatgaagacacaggaagaaaatggc
catctacaaggaaggaaagaggtctcagcagaaataaaccctgctgacaccttgatcttg
gacttccagcctccagaactatga

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_2|224_aa
MKNKHGSEEGPRSRKRQKSRKNNVAFRATLLLEICANSGESGCEAEQLSWDDFDNLPEQE
GQSLGPESTKEKKPVTKCSRERLLQQDDWKQSNSQSAKDVVEKICPSHNTSSLKGISGGS
SASPWPSYRLEVLKSGTNSEKEPSRYLESSLGVPVSSVSGTWSQKRDWPSDGFVPLTSQA
LSPLHPKEGQHRIDHSLFPRIIPDLSPRGLRDPSASLHTQTDGP

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_2|675_bp
atgaagaataaacacggtagtgaagaaggaccaagatccaggaaaaggcagaaatccaga
aagaataacgttgcattcagggctacacttcttctggagatttgtgccaattctggagaa
agtggatgtgaagctgagcaactgagctgggatgattttgacaatctgccagagcaagaa
ggacaaagtctgggaccagagtccaccaaggagaagaaaccagtgaccaagtgttccagg
gagagactgctccagcaggatgactggaagcagagcaacagccaatcggcaaaggatgtg
gtggagaagatctgtccatcccacaacacaagcagcctcaagggcatatctgggggtagt
tcagccagcccttggccatcctacaggctagaagtgctcaaaagtgggacaaactcagag
aaggaacccagtcggtatctggaatcgagcctgggagttccagtgtcctcagtatctgga
acatggtctcaaaagagggattggccttcagatgggtttgtccccttaacctctcaggct
ctttcccccttgcatcccaaggaagggcaacacagaatagaccacagccttttccccaga
atcatcccagatcttagtccccggggactgagagatccctctgcatcccttcacactcag
acagatggcccatag

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_3|508_aa
MPVGAGRRAKGDPATLGALAVFTVGAKRSKGHSPKPHPAGRLPPLPPLRQRSTPMIDTLR
PVPFASEMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRL
QKGNLPVRALFTRGEDRDRFTRRCGTDTVVLYDESSSDWNENTGGESVLGLLLKKLKDEG
CRAFYLEGGFSKFQAEFSLHCETNLDGSCSSSSPPLPVLGLGGLRISSDSSSDIESDLDR
DPNSATDSDGSPLSNSQPSFPVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNL
FENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHCLAGISRSVTVTVA
YLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTLGLSSPCDNRVPAQQLYFTT
PSNQNVYQDDTTKLAPKKFTSSLLSLLEANWEREGMVGNDAIILFLDHVCTRSPWSSKHE
EWLHTSDGPVQKENVGPLVQIAGKTGYS

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_3|1527_bp
atgcccgtgggtgcggggcgtcgggcgaagggagaccccgcgaccttaggcgccctcgcg
gtgttcacggtaggcgcaaagcgcagcaagggacactccccaaagccgcaccccgccgga
cggctgcccccgcttccgcctctcaggcagcgctcgacccccatgatagatacgctcaga
cccgtgcccttcgcgtcggaaatggcgatcagcaagacggtggcgtggctcaacgagcag
ctggagctgggcaacgagcggctgctgctgatggactgccggccgcaggagctatacgag
tcgtcgcacatcgagtcggccatcaacgtggccatcccgggcatcatgctgcggcgcctg
cagaagggtaacctgccggtgcgcgcgctcttcacgcgcggcgaggaccgggaccgcttc
acccggcgctgtggcaccgacacagtggtgctctacgacgagagcagcagcgactggaac
gagaatacgggcggcgagtcggtgctcgggctgctgctcaagaagctcaaggacgagggc
tgccgggcgttctacctggaaggtggcttcagtaagttccaagccgagttctccctgcat
tgcgagaccaatctagacggctcgtgtagcagcagctcgccgccgttgccagtgctgggg
ctcgggggcctgcggatcagctctgactcttcctcggacatcgagtctgaccttgaccga
gaccccaatagtgcaacagactcggatggtagtccgctgtccaacagccagccttccttc
ccagtggagatcttgcccttcctctacttgggctgtgccaaagactccaccaacttggac
gtgttggaggaattcggcatcaagtacatcttgaacgtcacccccaatttgccgaatctc
tttgagaacgcaggagagtttaaatacaagcaaatccccatctcggatcactggagccaa
aacctgtcccagtttttccctgaggccatttctttcatagatgaagcccggggcaagaac
tgtggtgtcttggtacattgcttggctggcattagccgctcagtcactgtgactgtggct
taccttatgcagaagctcaatctgtcgatgaacgatgcctatgacattgtcaaaatgaaa
aaatccaacatatcccctaacttcaacttcatgggtcagctgctggacttcgagaggacg
ctgggactcagcagcccatgtgacaacagggttccagcacagcagctgtattttaccacc
ccttccaaccagaatgtataccaggatgacacaactaaactggccccaaagaagttcact
tcctcactcttatccctcctagaggcaaactgggagagggagggaatggtcggcaatgat
gccatcatccttttcctggatcacgtctgcactcggagtccttggtcttctaagcacgag
gaatggctacatacctcggatggcccagtgcaaaaagaaaatgtggggcctcttgttcaa
attgctggaaaaacagggtacagttga

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_4|155_aa
MSVATEVPVATGKSDWEVSASLTENALLPRSVRPPVGATESHLQLSLTPGAGPKSALRGN
QIKRAFELNGHTFIIVLIIHSLHYYHNSGTVKQSVIWAKRSGVEEGGEVEQQGKLKTINQ
KKTEKKHRASFTGSVAPKPSFQGYGFKIMEEAAFT

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_4|468_bp
atgtctgtagccactgaggttcctgttgcaacagggaaatcagattgggaggttagtgca
tcattgacagagaatgccctccttccacgctctgttcgaccccctgtgggggccacagag
agtcacctgcagctcagtcttaccccaggtgctgggcccaagtctgctcttagaggaaat
caaatcaaacgagcattcgagttaaatggccacactttcattattgttcttattattcac
agtctgcattactaccacaacagtggcaccgttaagcaatccgtcatttgggccaaacgg
tcaggggtggaggaaggaggagaggtagaacaacagggtaaactgaaaacaatcaatcaa
aaaaagacagaaaaaaagcaccgagccagtttcacaggctccgttgctccaaagccatca
tttcaaggttatggctttaaaattatggaggaggcagctttcacctga

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_5|184_aa
MKGLLPPESCVNRLGCRWETPKENLEEMDKFPDTYTLPRLNHEEVEYLNGPTTSSEIEAL
INSLPTKKSQGADRFTAEFHLRTSDKNHMVISIDAEKAFDKIQHPFMLKTLNKLGIDGTS
LKIIRDIYDKPTANIIPNGQKLEAFPLKTGTREGMINITSCETLQLSLAESGEEGGFNNF
ELFM

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_5|555_bp
atgaaaggtttacttcctccagaaagctgcgtgaaccgcttaggatgccgatgggaaaca
cctaaagaaaatctagaagaaatggataaattcccggacacatacaccctcccaagatta
aaccatgaagaagtcgaatacctgaatggaccaacaacaagttctgaaattgaggcacta
attaatagcctaccaaccaagaaaagccaaggagcagacagattcacagctgaattccac
ctgagaaccagtgacaaaaaccacatggttatctcaatagatgcagaaaaagcctttgat
aaaattcaacatcccttcatgctaaaaacactcaataaactaggtattgacggaacgtct
ctcaaaataataagagatatttatgacaaacccacagccaatatcataccaaacgggcaa
aagctggaagcattccctttgaaaaccggcacaagagaaggaatgatcaacatcaccagt
tgtgagactctccaactctcacttgctgaaagcggtgaagaagggggatttaacaacttt
gaacttttcatgtga

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_6|128_aa
MGLSKEELKNSDCPAILFDKVLPQSIVSSMKEDTMSDLFFAIALMPTIGECLPTTTKKKT
EDMSDLPCESQRSIPLAVTDALEHIMEQLNVLTQTVSILEQRLTLTEDKLKDCLENQQKL
FSAVQQKS

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_6|387_bp
atggggttatccaaagaagaacttaagaatagtgattgccctgccatcctttttgataaa
gtacttccccagagtattgtaagctccatgaaggaagataccatgtctgacttgttcttt
gctatagctctaatgcctaccataggagaatgtttgccaacaaccacgaaaaagaaaaca
gaagacatgagtgacctcccctgtgaaagtcaaaggagcatacctctcgctgtgactgat
gctttagagcatattatggaacaactcaatgttttgacacagactgtttcaatcttggag
cagcgactgactttgacagaggataagctgaaagactgccttgaaaatcagcaaaagctt
ttcagtgctgtccaacagaaaagctga

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_7|315_aa
MVKGSIQQEELTILNIYAPNAGAPRFIKQVLRDLQRDLDSHTIIMGDFNTPLSTLDSSTR
QKVNKDIQELNSALHQVDLMDIYRTLHPKSTEYTFFSAPHCTYSKIDHIVGSKAQLSKCK
RTEMITNCLSDHNAIKLELRIKKLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFFEKIHKIDRPLARLIKKKREKNQIDAIKNDKG
DITTNPTEIQTTIRK

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_7|948_bp
atggtcaagggatcaatccaacaagaagagctaactatcctaaatatatatgcacccaat
gcaggagcacccagattcataaagcaagtccttagagacttacaaagagacttagattcc
cacacaataataatgggagactttaacaccccactgtcaacattagacagttcaacaaga
cagaaagttaacaaggatatccaggaattgaactcagctctgcaccaagtggacctaatg
gacatctatagaactctccaccccaaatcaacagaatatacatttttctcagcaccacat
tgcacttattccaaaattgaccatatagttggaagtaaagcacaactcagcaaatgtaaa
agaacagaaatgataacaaactgtctctcagaccacaatgcaatcaaactagaactcagg
attaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgag
aacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaa
tttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaaca
tcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaagatcagagcagaactgaaggagatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaagatccacaaaattgatagaccactagca
agactaataaagaagaaaagagagaagaatcaaatagatgcaataaaaaatgacaaaggg
gatatcaccaccaatcccacagaaatacaaactaccatcagaaaataa

>gi568815586r:89249257_89452039|GENSCAN_predicted_peptide_8|42_aa
XWFTTELNAICGAVGASRKIVNLAFNCSAHLYPSGFELFGAA

>gi568815586r:89249257_89452039|GENSCAN_predicted_CDS_8|129_bp
ngatggtttactacggagctaaatgccatttgtggggctgttggagcttcacggaaaata
gtgaacttagctttcaactgttctgcacatctatacccatctggttttgagttatttggt
gctgcatag