GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:53:18

Sequence gi568815594f:73736751_73937286 : 200536 bp : 36.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3782   3821   40                              -3.75
 1.01 Init +   3909   3972   64  2  1   90  121   120 0.999  15.08
 1.02 Intr +   4792   4927  136  2  1  116   92    73 0.999   9.21
 1.03 Intr +   5199   5282   84  0  0   93  107    74 0.974   7.82
 1.04 Term +   8014   8092   79  1  1  106   54    45 0.858  -0.84
 1.05 PlyA +   8306   8311    6                               1.05

 2.00 Prom +  12628  12667   40                              -2.95
 2.01 Init +  25313  25376   64  1  1   78   55    68 0.169   3.86
 2.02 Term +  27204  27343  140  1  2   96   54    51 0.201  -0.36
 2.03 PlyA +  27613  27618    6                               1.05

 3.03 PlyA -  27966  27961    6                               1.05
 3.02 Term -  29224  28776  449  2  2   58   48   246 0.122  11.99
 3.01 Init -  34513  34276  238  1  1   62   99   103 0.212   7.02
 3.00 Prom -  42284  42245   40                              -5.65

 4.00 Prom +  44873  44912   40                              -5.45
 4.01 Init +  44929  45012   84  0  0   82  116   -16 0.440   1.47
 4.02 Term +  51461  51892  432  1  0 -328   54   962 0.573  45.51
 4.03 PlyA +  52612  52617    6                               1.05

 5.00 Prom +  59572  59611   40                              -2.35
 5.01 Init +  63195  63385  191  2  2   64   88    60 0.288   2.06
 5.02 Term +  66102  66219  118  0  1   92   48   119 0.379   5.33
 5.03 PlyA +  66770  66775    6                               1.05

 6.00 Prom +  67494  67533   40                              -2.55
 6.01 Init +  71682  71744   63  2  0   62  116    56 0.859   7.00
 6.02 Term +  88890  88952   63  2  0   87   36    69 0.021  -1.49
 6.03 PlyA +  89754  89759    6                               1.05

 7.02 PlyA -  89888  89883    6                               1.05
 7.01 Sngl -  90313  89927  387  1  0   37   45   228 0.556   9.36
 7.00 Prom -  97924  97885   40                              -3.65

 8.00 Prom +  98223  98262   40                              -7.05
 8.01 Init + 100001 100109  109  1  1   70   81   160 0.988  11.93
 8.02 Intr + 100214 100346  133  0  1   94   78   134 0.841  11.78
 8.03 Intr + 100453 100536   84  1  0   97   68    58 0.651   2.72
 8.04 Intr + 111154 111263  110  1  2   81   75    37 0.095   0.71
 8.05 Term + 111964 112088  125  2  2  106   33    89 0.822   2.77
 8.06 PlyA + 112511 112516    6                               1.05

 9.00 Prom + 115876 115915   40                              -6.95
 9.01 Init + 116613 116712  100  2  1   83   78   159 0.952  12.88
 9.02 Intr + 117033 117159  127  1  1  140   84    38 0.467   7.42
 9.03 Term + 117285 117372   88  0  1   86   37    79 0.454  -1.25
 9.04 PlyA + 117460 117465    6                               1.05

10.03 PlyA - 117748 117743    6                              -0.45
10.02 Term - 118298 118051  248  0  2   66   55   169 0.569   6.37
10.01 Init - 126962 126890   73  2  1   66  116    71 0.916   8.98
10.00 Prom - 130327 130288   40                              -2.65

11.00 Prom + 132606 132645   40                              -5.75
11.01 Init + 132721 132820  100  0  1   80   94   167 0.540  14.97
11.02 Intr + 132919 133042  124  2  1  114  103   164 0.999  19.22
11.03 Intr + 133156 133239   84  1  0  137  109   105 0.974  15.52
11.04 Intr + 137081 137188  108  2  0   81  111    12 0.318   1.28
11.05 Intr + 157362 157426   65  0  2  107   56     7 0.004  -3.16
11.06 Term + 162493 162623  131  2  2   72   39   162 0.939   7.06
11.07 PlyA + 163314 163319    6                               1.05

12.04 PlyA - 164001 163996    6                               1.05
12.03 Term - 170026 168819 1208  2  2   30   39   417 0.001  21.83
12.02 Intr - 181219 181097  123  2  0   52   77   102 0.004   5.14
12.01 Init - 196711 196669   43  1  1   76   80    50 0.129   3.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  37505  37295  211  1  1   27   36   193 0.869   3.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_1|120_aa
MTSKLAVALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPH
CANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKSPQQSPECDVPLPVSMCSPCSIPTYE

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_1|363_bp
atgacttccaagctggccgtggctctcttggcagccttcctgatttctgcagctctgtgt
gaaggtgcagttttgccaaggagtgctaaagaacttagatgtcagtgcataaagacatac
tccaaacctttccaccccaaatttatcaaagaactgagagtgattgagagtggaccacac
tgcgccaacacagaaattattgtaaagctttctgatggaagagagctctgtctggacccc
aaggaaaactgggtgcagagggttgtggagaagtttttgaagagcccacaacagtcccca
gagtgtgatgttccccttcctgtgtccatgtgttctccttgttcaattcccacctatgag
tga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_2|67_aa
MVTLETQDVIRKEHGVGFKGTVSLSKWSSLMPALKWTAVSSTPAIQFSPHSLTHTLLQGV
KSCWLSK

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_2|204_bp
atggtaaccctagagacacaggatgtgattagaaaggaacatggagtaggatttaagggt
actgtaagtctgagtaagtggagttcactcatgccagcactgaagtggacagctgtttcc
agcactcctgcaatccagttctcgcctcattcactcacgcacacccttctgcaaggagtt
aagagctgctggctgagtaaatga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_3|228_aa
MSFGSEEEYFPDPFTGLTTEVPHLLSQQLSTLVGGSTLSNEAGTGLHEPWNQLAALVPAG
ANSTHLHLLCSTPFRRECTEVLVLEGGMLPPGDTTMISLNWKLRLSPGHLAFLLPLSQQA
KKGVTLLAGVTDSDHQDEISLLLHNGGKEECTWNTGDPLGCLLVLPCPMIKVNGKLQRPN
PDRTTNGPEPSGIKVSVTLPGKKPQPAEVLAEGKGNTEWVVEVVINTS

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_3|687_bp
atgtcttttggtagtgaagaagaatatttccctgaccctttcacaggactcacaacagag
gtgcctcatttactcagtcagcagctttcaactcttgtgggagggagcacgctatcaaat
gaggcaggaactggattgcatgagccctggaaccagctggctgctttggtgccagcagga
gcaaactccactcacttgcacctgctgtgttccacccctttcaggagggagtgcacagag
gtcttagttctagagggaggaatgctgccaccaggagacacaactatgatttcattaaac
tggaagttaagattgtcacctggccaccttgcgttcctcctacctctaagtcaacaggct
aagaaaggagttacattgttggctggggtgactgactcagaccatcaagatgaaatcagc
ctactactccacaatggaggtaaggaagagtgcacatggaatacaggagatcccttaggg
tgtctcttagtattaccatgccctatgataaaggtcaatgggaaactacaacggcccaat
ccagacaggactacaaatggcccagaaccttcaggaataaaggtttcggtcactctacca
ggtaaaaaaccacaacctgctgaagtgcttgctgaaggcaaagggaatacagaatgggta
gtagaagtagtcatcaataccagctaa

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_4|171_aa
MGETAPMIQLPPPGPALDMWRLWGLQFKEKEEEEEKEEEEDEEKEEDEKEEDEEDEKKED
EKEEEEKEDEEKEEEEKEEDEKEEDEEEEEKEKEEKKEEEKEEEEKEKEEEEEKEEEEEK
EEEEKKKRQQSQSPFHTRISLFHSGSFTSNITKDFIEAKRKVELVTRVCML

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_4|516_bp
atgggggaaacagctcccatgattcaattacccccacctggtcctgcacttgacatgtgg
agattatggggattacaattcaaggagaaggaggaggaggaggaaaaggaggaggaggag
gatgaggagaaggaggaggatgagaaagaggaggatgaggaggatgagaagaaggaggat
gagaaggaggaggaagaaaaggaggatgaggagaaggaggaggaggagaaggaggaggat
gagaaggaggaggatgaggaggaggaggagaaggagaaggaggagaaaaaggaggaggag
aaggaggaggaggagaaggagaaggaggaggaagaggagaaggaggaggaagaggagaag
gaggaggaggagaagaagaagagacaacagagtcagagtccctttcacactaggatttct
ctctttcattctggaagttttacttctaatattacaaaggacttcattgaagccaagcgg
aaagttgaacttgtgacaagagtgtgtatgctgtga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_5|102_aa
MPACELHQLAYLEYLVGVIGEELFLLEPMYKGWKLYLLLQMCNHKHKPIMITDNQGNMTP
IGMSSFMSVEVELAEATDNPFSTAATAVPTLAATTLGKKQRV

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_5|309_bp
atgcctgcctgtgaactccaccaactggcctatctagaatatctggtgggagtgattggt
gaagagctgtttcttttggagccaatgtataaaggctggaagctgtatctacttcttcaa
atgtgcaaccacaaacacaagcccataatgatcacagataatcagggaaacatgacacca
ataggaatgagtagctttatgtctgttgaggtggagcttgcagaagcaactgacaacccc
ttttccactgctgctacagcagtacccacccttgctgccacaacactggggaaaaaacaa
agagtctga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_6|41_aa
MDTKKGAIDIRAFFKVEGGKKSLAKDSWRNRELAVLLTVTS

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_6|126_bp
atggacacaaagaagggagcaatagacatcagagccttctttaaggtggagggtgggaag
aagagtctagctaaagacagttggaggaacagggagttggcagtcctactcacggtaact
tcatag

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_7|128_aa
MKNYFLWMNKEWFLEMESTPGENAVMIVEMITKDTEYYIINFVDKATSGIERIDSNFGRG
SAVDKMLPNNIMCYREIFCERKSQSMPQISLLTSFKKLPQPPQPSAANFLISEQPSTLRQ
DSPPGKVL

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_7|387_bp
atgaagaattacttcttatggatgaacaaagagtggtttcttgaaatggaatctactcct
ggtgaaaatgctgtgatgattgttgaaatgataacaaaggatacggagtattacatcata
aattttgttgataaagcaacatcaggaattgaaaggattgactccaattttggaagaggt
tctgctgtggataaaatgctgccaaacaacataatgtgctatagagaaatcttttgtgaa
aggaagagtcaatcaatgccacaaatctcattgctgacttcttttaagaaattgccacag
ccacctcaaccatcagcagccaacttcctgatcagtgagcagccatcaacattgaggcaa
gactctccaccaggaaaagtattatga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_8|186_aa
MSLPSSRAARVPGPSGSLCALLALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNP
KTIGKLQVFPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKVIQKILDSARPFHALQVLL
LLSLLLTALPSCTNGQSKRNLGKSKDNSVVSYRAMLKDGRKMYLDPEAPRIKKIVQKMLE
GDGSGA

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_8|561_bp
atgagcctcccgtccagccgcgcggcccgtgtcccgggtccttcgggctccttgtgcgcg
ctgctcgcgctgctgctcctgctgacgccgccggggcccctcgccagcgctggtcctgtc
tctgctgtgctgacagagctgcgttgcacttgtttacgcgttacgctgagagtaaacccc
aaaacgattggtaaactgcaggtgttccccgcaggcccgcagtgctccaaggtggaagtg
gtagcctccctgaagaacgggaagcaagtttgtctggacccggaagccccttttctaaag
aaagtcatccagaaaattttggacagtgccagaccatttcatgccctgcaggtgttgctg
cttctgtcactgctgctgaccgctctgccttcctgcaccaatgggcaaagcaagagaaac
ttagggaaaagcaaagataattctgttgtctcttacagagccatgctgaaagatgggagg
aaaatgtacctggacccagaagctcccagaatcaagaagatagtccagaaaatgttggaa
ggtgatgggtcaggtgcttaa

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_9|104_aa
MSSAARSRLTRATRQEMLFLALLLLPVVVAFARAEAEEDGDLQCLCVKTTSQVRPRHITS
LEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKIIKEHLES

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_9|315_bp
atgagctccgcagccaggtcccgcctcacccgcgccacccgccaggagatgctgttcttg
gcgttgctgctcctgccagttgtggtcgccttcgccagagctgaagctgaagaagatggg
gacctgcagtgcctgtgtgtgaagaccacctcccaggtccgtcccaggcacatcaccagc
ctggaggtgatcaaggccggaccccactgccccactgcccaactcatagccacgctgaag
aatgggaggaaaatttgcttggatctgcaagccctgctgtacaagaaaatcattaaggaa
catttggagagttag

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_10|106_aa
MRAWNFVMLGENLPESEFGPEKSKDVLENLSWKAFLNYPSEPNVFTRLLMRGKPDIKGRR
VSRDRGEVEVGVMQVEDWRKGYEARNAGEKGEEVDSLLEPSEGIQL

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_10|321_bp
atgagggcctggaattttgtaatgcttggagagaacctacctgagagcgaatttggccca
gagaaaagcaaagatgtattagagaacttgagttggaaagcgtttctgaattatccaagt
gagcccaatgtattcacacgcctccttatgagaggtaagccggatataaaaggtagaaga
gtcagcagagacagaggagaagtagaggttggtgtgatgcaggttgaagactggagaaag
ggctatgaggcaaggaatgctggtgaaaaaggagaggaagtagattctcttctagagcct
tcagaaggaatacagctctga

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_11|203_aa
MARAALSAAPSNPRLLRVALLLLLLVAAGRRAAGASVATELRCQCLQTLQGIHPKNIQSV
NVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKMLNSMYNHFHLTAGNFESYVA
ECQDLFSFFRVLGSILTSSLPHILSVLLLLSNSCSKQTALSMFIEYQQPALNFRHFEDVH
ETQPLISRDSESIVDRRGANITV

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_11|612_bp
atggcccgcgctgctctctccgccgcccccagcaatccccggctcctgcgagtggcactg
ctgctcctgctcctggtagccgctggccggcgcgcagcaggagcgtccgtggccactgaa
ctgcgctgccagtgcttgcagaccctgcagggaattcaccccaagaacatccaaagtgtg
aacgtgaagtcccccggaccccactgcgcccaaaccgaagtcatagccacactcaagaat
gggcggaaagcttgcctcaatcctgcatcccccatagttaagaaaatcatcgaaaagatg
ctgaacagcatgtataatcattttcatttgactgcaggaaattttgaatcttatgttgct
gagtgtcaagatttgttctctttctttagagtcttgggctccattttgacaagcagcttg
cctcacatcctctcagtcctcctgctactcagcaattcctgcagcaaacaaactgctctg
tcaatgttcatcgaatatcaacaacctgcactaaatttcaggcactttgaggatgttcat
gaaacacagcccttgatctcaagagattcagagtctattgtggatcggaggggagcaaac
atcacagtttag

>gi568815594f:73736751_73937286|GENSCAN_predicted_peptide_12|457_aa
MSALNERLKNPENSVNTFFQTRQNITTNRSTLNQRSSTFFLAPGTCFVEDNFSKDAQNLL
KLISNFSKVSRYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKD
LKENYKPLLSEIKEDTNKWKNIPCSWVGRINIMKMAILLKVIYRFNAIPTKLQMTFFTEL
EKATLKFIWNQKRACITKSILSQKNKAGGITLPDFKLYYKAMVTKTAWYWYQNRDIDQWN
RTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKIN
SRWIKDLNIRPKTIKTLEENLGSTIQDIGMGKDFMSETPKAMATKARIDQWDLIKLKSFC
TAKETAIRVNRQPTKWEKIFATYSSDKGLISRIYNEVKQIYQKKTNNPIKKWMKDMNRHF
SKEDIYAAKKTHEKMLTITGHQRKANQNHNEIPSHTS

>gi568815594f:73736751_73937286|GENSCAN_predicted_CDS_12|1374_bp
atgtctgcacttaatgagcgtctaaagaatcctgaaaattcagttaacacatttttccag
acacgacaaaatataacaactaatagaagtactttaaatcagcggtcctcaacctttttt
ttggcaccagggacctgttttgtggaagacaatttttccaaggatgcccaaaatctcctt
aagctgataagcaacttcagcaaagtctcaagatacaaaatcaatgtacaaaaatcacaa
gcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattc
acaattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggac
ctcaaggagaactacaaaccactgctcagtgaaataaaagaggatacaaacaaatggaag
aatattccatgctcatgggtaggaagaatcaatatcatgaaaatggccatactgctcaag
gtaatttatagattcaatgccatccccaccaagctacaaatgactttcttcacagaattg
gaaaaagctactttaaagttcatatggaaccaaaaaagagcctgcatcaccaagtcaatc
ctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaag
gctatggtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaac
agaacagagccctcagaaataatgccgcatatctacaactatctgatctttgacaaacct
gagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactgg
ctagccatatgtagaaagctgaaactggatcctttccttacaccttatacaaaaattaat
tcaagatggattaaagacttaaacattagacctaaaaccataaaaaccctagaagaaaac
ctaggcagtaccattcaggacataggcatgggcaaggacttcatgtctgaaacaccaaaa
gcaatggcaacaaaagccagaattgaccaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaactgccatcagagtgaacaggcaacctacaaaatgggagaaaattttc
gcaacctactcatctgacaaagggctaatatccaggatctacaatgaagtcaaacaaatt
taccagaaaaaaacaaacaaccccatcaaaaagtggatgaaggacatgaacagacacttc
tcaaaagaagacatttatgcagccaaaaaaacacatgaaaaaatgctcaccatcactggc
catcagagaaaagcaaatcaaaaccacaatgagataccatctcacaccagttag