GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:18:54

Sequence gi568815576f:26522584_26730484 : 207901 bp : 47.81% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    992    987    6                               1.05
 1.06 Term -   3684   3637   48  0  0  101   42    50 0.333  -1.00
 1.05 Intr -  10162  10112   51  1  0  134   66    30 0.863   4.50
 1.04 Intr -  13903  13705  199  0  1  129  100   322 0.965  36.85
 1.03 Intr -  19135  18206  930  0  0  136   89  1715 0.328 166.73
 1.02 Intr -  22092  22021   72  2  0  111  107    26 0.268   5.32
 1.01 Init -  28058  28009   50  2  2   56   84    39 0.236   0.72
 1.00 Prom -  30812  30773   40                              -7.26

 2.00 Prom +  34497  34536   40                              -4.46
 2.01 Sngl +  37943  38578  636  1  0   76   38   836 0.940  73.59
 2.02 PlyA +  39731  39736    6                               1.05

 3.00 Prom +  43165  43204   40                              -7.16
 3.01 Init +  46041  46096   56  2  2  101  100     8 0.185   4.06
 3.02 Intr +  55735  55880  146  1  2   66   89   126 0.363  10.43
 3.03 Term +  55935  56011   77  1  2   94   43    10 0.195  -4.90
 3.04 PlyA +  56405  56410    6                               1.05

 4.07 PlyA -  58400  58395    6                               1.05
 4.06 Term -  66611  66599   13  1  1  136   54     8 0.219  -0.13
 4.05 Intr -  77090  76911  180  1  0  110   89   207 0.520  21.98
 4.04 Intr -  79438  79296  143  1  2  120   85   228 0.999  24.85
 4.03 Intr -  85438  85306  133  0  1   73  101   261 0.997  26.55
 4.02 Intr -  89607  89489  119  0  2   77   84   158 0.948  13.56
 4.01 Init -  93736  93557  180  1  0   85   86   186 0.998  15.55
 4.00 Prom -  95478  95439   40                              -1.16

 5.00 Prom +  97540  97579   40                              -6.86
 5.01 Init +  99383  99403   21  1  0   46  123    30 0.222   0.50
 5.02 Intr + 100651 100769  119  0  2   92   75   186 0.244  16.96
 5.03 Intr + 102898 103039  142  1  1  122   87   140 0.998  17.66
 5.04 Intr + 105705 105847  143  2  2  111   88   130 0.999  14.45
 5.05 Term + 107757 107904  148  0  1  115   47   121 0.951   8.07
 5.06 PlyA + 108064 108069    6                               1.05

 6.00 Prom + 119234 119273   40                              -6.36
 6.01 Sngl + 119602 119814  213  0  0   97   46   211 0.979  12.99
 6.02 PlyA + 120790 120795    6                              -1.95

 7.04 PlyA - 121150 121145    6                              -0.45
 7.03 Term - 122795 122470  326  0  2  -10   47   298 0.771  10.83
 7.02 Intr - 123848 123690  159  0  0   99   91    74 0.987   8.76
 7.01 Init - 124522 124465   58  1  1   84   86    27 0.944   3.76
 7.00 Prom - 125369 125330   40                              -6.36

 8.04 PlyA - 129767 129762    6                               1.05
 8.03 Term - 146855 146840   16  1  1  127   55    22 0.047   0.51
 8.02 Intr - 152039 151910  130  0  1  100   66    74 0.242   6.15
 8.01 Init - 183355 183205  151  1  1   64   20   114 0.286   2.40
 8.00 Prom - 183433 183394   40                              -0.86

 9.02 PlyA - 183682 183677    6                               1.05
 9.01 Term - 191437 191343   95  2  2   65   50   116 0.651   3.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_1|449_aa
MAEPEHVGTGPCSRATLALPADSLGTQAQGLEPRDESAQGRCEPGGLPANLSLKPQKRAL
RPGLPCLRPSMRLSVRRVLLAAGCALVLVLAVQLGQQVLECRAVLAGLRSPRGAMRPEQE
ELVMVGTNHVEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETRIIPRVLAMR
QAWSKSGREKLRLDEAGVTDEVLDAAMQAFILEVIAKHGEPARVLCNKDPFTLKSSVYLS
RLFPNSKFLLMVRDGRASVHSMITRKVTIAGFDLSSYRDCLTKWNKAIEVMYAQCMEVGK
EKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLIGKPGGVSLSKIERSTDQVI
KPVNLEALSKWTGHIPGDVVRDMAQIAPMLAQLGYDPYANPPNYGNPDPFVINNTQRVLK
GDYKTPANLKGYFQISANDFIAKKRRKCI

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_1|1350_bp
atggctgagcctgagcacgtgggcactgggccctgctccagggccactctggctctgcca
gcagacagccttggcacacaggcacaagggctggagcccagagatgagagtgcccaaggg
agatgtgagcctggcgggctgcccgctaacctgtcgctgaagccccagaagcgggccctc
aggccaggcctaccctgcctccggcccagcatgcgcctgtcggtgcggagggtgctgctg
gcagccggctgcgccctggtcctggtgctggcggttcagctgggacagcaggtgctagag
tgccgggcggtgctggcgggcctgcggagcccccggggggccatgcggcctgagcaggag
gagctggtgatggtgggcaccaaccacgtggaataccgctatggcaaggccatgccgctc
atcttcgtgggtggcgtgcctcgcagtggcaccacgttgatgcgcgccatgctggacgcg
caccccgaggtgcgctgcggcgaggagacccgcatcatcccgcgcgtgctggccatgcgc
caggcctggtccaagtctggccgtgagaagctgcggctggatgaggcgggggtgacggat
gaggtgctggacgccgccatgcaggccttcatcctggaggtgattgccaagcacggagag
ccggcccgcgtgctctgcaacaaggacccatttacgctcaagtcctcggtctacctgtcg
cgcctgttccccaactccaagttcctgctgatggtgcgggacggccgggcctccgtgcac
tccatgatcacgcgcaaagtcaccattgcgggctttgacctcagcagctaccgtgactgc
ctcaccaagtggaacaaggccatcgaggtgatgtacgcccagtgcatggaggtaggcaag
gagaagtgcctgcctgtgtactacgagcagctggtgctgcaccccaggcgctcactcaag
ctcatcctcgacttcctcggcatcgcctggagcgacgctgtcctccaccatgaagacctc
attggcaagcccggtggtgtctccctgtccaagatcgagcggtccacggaccaggtcatc
aagcctgttaacctggaagcgctctccaagtggactggccacatccctggggatgtggtg
cgggacatggcccagatcgcccccatgctggctcagctcggctatgacccttatgcaaac
ccccccaactatggcaaccctgaccccttcgtcatcaacaacacacagcgggtcttgaaa
ggggactataaaacaccagccaatctgaaaggatattttcagatctccgcaaatgacttc
attgccaagaagagaagaaaatgcatttaa

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_2|211_aa
MSKGDPKKLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKF
EDMAKADKAHYEREMKTYIPPKGETKKKFKDPNAPKRTPSAFFLFCSAYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEDEEDEDEEDDE

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_2|636_bp
atgagcaaaggagatcctaagaagctgagaggcaaaatgtcatcacatgcattttttggg
caaacttgtcgggaggcgcataagaagaagcacccagatgcttcagtcaacctctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccattacgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatccgaatgcacccaagaggactccttcg
gccttcttcctgttctgctctgcgtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgccgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggaa
gatgaagaagatgaagatgaagaagatgatgaataa

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_3|92_aa
MTFTNAIAMPEVTLYGLKSSQRGFSDQQEQRLGTYTKCRLSGLKETTLNGNSGSGVQQPV
LKKPSIHGLCHGDYAWGPQGPQRRKILPRVPQ

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_3|279_bp
atgacgtttacaaatgccatagcaatgccagaagttaccctatatggtctaaaaagctct
caacgtgggttctctgaccagcaggaacagcgcttaggaacctacacaaaatgcagatta
tcagggctcaaggagaccacgctgaatgggaactctggaagtggggtacagcaacctgtg
ttgaagaagccctccatccacggactgtgccatggggactatgcctggggaccccaaggt
cctcagagaaggaagattttgcccagagtcccgcagtag

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_4|255_aa
MSQAAKASASATVAVNPGPDTKGKGAPPAGTSPSPGTTLAPTTVPITSAKAAELPPGNYR
LVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKGE
YPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFS
DRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRDKQWHLE
GSFPVLATEPPKWGD

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_4|768_bp
atgtctcaggctgcaaaggcctcggcctcggccacagtggcggtgaacccagggcctgac
accaaggggaagggggccccacctgcaggaacatcccctagtcccggcactaccctggcc
ccaacaaccgtgcctattaccagcgccaaggcggcggaactgcctcctgggaactacagg
ctggtggtcttcgaactggaaaacttccagggccgtcgagcagaattctcgggggagtgc
tcaaatctggcagaccgtggcttcgaccgtgtgcgcagcatcattgtctccgcgggaccc
tgggtcgcctttgagcagtccaacttccgcggggagatgttcatcctggagaagggcgag
taccctcgctggaacacatggtcgagcagctaccgcagtgatcggctcatgtccttccgg
cccatcaaaatggatgcccaggagcacaaaatctccctgtttgaaggggccaacttcaag
ggcaacaccatagagatccagggggacgacgcacccagtctctgggtctacggcttcagt
gaccgcgtgggcagcgtgaaggtctccagtggaacatgggttggctatcagtatcctggc
taccgcgggtaccagtacctcctagagcctggtgacttccggcactggaatgagtgggga
gccttccagccacagatgcagtccctgcgtcgcctgcgtgacaagcagtggcacctcgag
gggtccttccctgtcctggccacagagccccccaaatggggagactga

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_5|190_aa
MFPGPISMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQ
YILERGEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDY
PSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTF
QVQSIRRIQQ

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_5|573_bp
atgttccctgggcctatctcgatggtggtgtgggatgaggacggcttccagggccggcgg
cacgagttcacggccgagtgccccagcgtgctggagcttggcttcgagactgtgcgatct
ttgaaagtgctgagtggagcgtgggtgggctttgagcatgctggcttccaagggcagcag
tacattctggaacgaggcgaatatccaagctgggatgcctggggcggcaacacggcctac
cccgccgagaggctcacctccttccggcctgcggcctgtgctaaccaccgtgactcgagg
ctgacaatcttcgagcaagagaacttcctgggcaagaaaggagagctgagcgatgactat
ccttccctccaggccatgggatgggaaggcaatgaagtagggtccttccacgtccactct
ggggcctgggtttgctcccagtttccgggctaccgaggatttcagtatgtgctggaatgc
gatcaccattccggtgactacaaacatttccgggagtggggctctcatgccccgaccttc
caggtgcagagcatccgcaggatccagcagtga

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_6|70_aa
MDEPAGHYAIMLSDIKTWFLLLPLYLSSHYCSTEIPKSKAVTKTSVGVIREKGTQPPSVK
GGEKLKILHI

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_6|213_bp
atggatgaacctgcaggacattatgctattatgctaagtgacatcaagacctggttcctc
ctcctgcccctctacctgagctctcactactgctccactgagatccccaagagcaaagct
gtgacaaagacttcagtgggagtcatcagagaaaaaggaacacaaccacctagcgtgaaa
gggggtgagaagctgaagatcctacacatctag

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_7|180_aa
MLTVSSQGLQGPQLLMPSKACPPPHSHATAVLQNSTFLIYEMHLGSLQISCECHNACRRE
AENSGANIFQKAGGTSTKKLISWVEEDGCRPGVVLKGRDADSGHFLAEGQAPRGLPGTPG
VSSSPEAGDGQIRLTDSCVQRLLEITKGSEFLRLQVEGGRCSGFQYRCSLDTVINPDDGI

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_7|543_bp
atgctgacggtgtcatcccagggtctccagggaccccagctgcttatgccttctaaagcc
tgcccacccccacacagccacgccacagccgtcctgcagaacagtacattccttatttat
gagatgcatctgggctctctgcaaatcagctgtgaatgccacaatgcctgcaggagggag
gcagagaattctggagccaacatcttccagaaggcaggtggaacctcaacaaagaaattg
atctcctgggtggaggaagatggttgccgcccaggggttgtccttaagggccgcgacgca
gacagcggtcacttcctggccgaggggcaggctcctcgcggcctccctgggactccgggc
gtgtcgtccagccccgaggccggcgacgggcagatccgcctcacggacagctgcgtccag
aggcttctggaaatcaccaaaggatcagaattcctcaggctgcaggtggagggaggtaga
tgctccggattccagtacagatgttcactggatacagttatcaaccccgacgacggtatt
tga

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_8|98_aa
MPKAIETKAKFDKWDLIKLKSFCKAKETINRVNRQPTGWEKNFANYASDKAQASGSPFTP
TANYNWLALSPQLPEKRALSTRLAFNDPSNLPLREKAM

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_8|297_bp
atgccaaaagcaattgaaacaaaagcaaaatttgacaaatgggatctaattaagctaaag
agcttctgcaaagcaaaagaaactatcaacagagtaaacagacagccaacaggatgggag
aaaaattttgcaaactatgcatctgacaaagctcaggcctctggatcacccttcaccccc
actgccaactacaattggttagctctgagtccacagttgccagagaaaagggctctcagc
accagactagcattcaacgacccaagcaacctgcctctaagagaaaaggccatgtga

>gi568815576f:26522584_26730484|GENSCAN_predicted_peptide_9|31_aa
XTSPKMQKQLSSPLGAANKYKALTSPGLALC

>gi568815576f:26522584_26730484|GENSCAN_predicted_CDS_9|96_bp
nggacatctccaaagatgcagaagcagcttagttctccactaggtgcagccaacaagtac
aaggcactcacgtccccagggctggccctctgctag