GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:05:04

Sequence gi568815581f:36111142_36312566 : 201425 bp : 45.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2213   2368  156  1  0   75   77    60 0.495   3.81
 1.02 Intr +   6584   6637   54  1  0  108   72    30 0.183   2.58
 1.03 Intr +   7851   7926   76  2  1   22  113    55 0.327   0.49
 1.04 Intr +   8147   8204   58  0  1  109  101    42 0.373   5.54
 1.05 Term +  10040  10154  115  2  1   53   44    78 0.232  -2.06
 1.06 PlyA +  11545  11550    6                               1.05

 2.00 Prom +  12442  12481   40                              -1.56
 2.01 Init +  18343  18454  112  0  1   68   72    69 0.526   3.67
 2.02 Intr +  36439  36554  116  2  2   68  109    20 0.083   2.27
 2.03 Intr +  38439  38570  132  2  0   91   72    21 0.021   1.64
 2.04 Intr +  45810  45860   51  2  0   62   79    51 0.049   0.70
 2.05 Term +  50472  50603  132  2  0  105   43   104 0.247   5.69
 2.06 PlyA +  51542  51547    6                               1.05

 3.14 PlyA -  51818  51813    6                               1.05
 3.13 Term -  53494  53337  158  2  2   95   39   129 0.728   6.80
 3.12 Intr -  55422  55210  213  1  0  101   49    71 0.634   3.19
 3.11 Intr -  56555  56403  153  0  0   85   80    82 0.818   7.14
 3.10 Intr -  57025  56926  100  1  1   91   89    78 0.700   7.88
 3.09 Intr -  58434  58382   53  1  2  100   38    77 0.764   2.53
 3.08 Intr -  58870  58750  121  1  1   92  110   146 0.994  17.27
 3.07 Intr -  59462  59414   49  1  1   97  117    62 0.988   8.68
 3.06 Intr -  60823  60714  110  1  2   92   82   150 0.999  13.88
 3.05 Intr -  61260  61153  108  0  0  107  101   162 0.994  19.88
 3.04 Intr -  61784  61704   81  2  0   52   92    42 0.599   0.83
 3.03 Intr -  62306  62267   40  1  1   80  116   -10 0.935  -0.77
 3.02 Intr -  63675  63590   86  0  2   81   79   118 0.921   8.82
 3.01 Init -  63909  63838   72  0  0   71   82    50 0.673   3.77
 3.00 Prom -  64502  64463   40                             -14.47

 4.00 Prom +  64728  64767   40                             -14.86
 4.01 Init +  65173  65224   52  0  1  123  105    85 0.997  15.02
 4.02 Intr +  67589  67621   33  0  0   80   82    35 0.546   0.29
 4.03 Intr +  68310  68448  139  1  1   70   59   125 0.809   7.32
 4.04 Intr +  71313  71437  125  0  2   94   84    22 0.735   2.63
 4.05 Intr +  71491  71835  345  2  0   29   59   283 0.436  14.86
 4.06 Term +  76014  76117  104  1  2   54   42    75 0.212  -2.06
 4.07 PlyA +  77490  77495    6                               1.05

 5.04 PlyA -  82876  82871    6                               1.05
 5.03 Term -  84235  84145   91  0  1  128   55    78 0.976   5.69
 5.02 Intr -  84771  84657  115  1  1  126  103   111 0.999  15.91
 5.01 Init -  85532  85457   76  2  1   82   94   103 0.940   9.66
 5.00 Prom -  98865  98826   40                              -0.66

 6.00 Prom +  99435  99474   40                              -7.66
 6.01 Init + 100001 100076   76  1  1   68  108    73 0.943   6.59
 6.02 Intr + 108622 108798  177  2  0   51   58    85 0.166   1.69
 6.03 Intr + 109139 109401  263  0  2   69   77   138 0.359   8.01
 6.04 Intr + 130558 130647   90  0  0  110    0    65 0.075   0.09
 6.05 Term + 138432 138563  132  2  0  105   43   163 0.842  11.59
 6.06 PlyA + 139502 139507    6                               1.05

 7.14 PlyA - 139778 139773    6                               1.05
 7.13 Term - 141453 141296  158  1  2   95   39    96 0.006   3.50
 7.12 Intr - 143381 143169  213  0  0  101   49    81 0.005   4.19
 7.11 Intr - 144496 144344  153  2  0   85   80    82 0.020   7.14
 7.10 Intr - 144966 144867  100  0  1   91   89    78 0.022   7.88
 7.09 Intr - 146372 146320   53  0  2  100   38    72 0.016   2.03
 7.08 Intr - 146808 146688  121  0  1   92  110   146 0.994  17.27
 7.07 Intr - 147400 147352   49  0  1   97  117    62 0.987   8.68
 7.06 Intr - 148758 148649  110  0  2  102   82   146 0.996  14.48
 7.05 Intr - 149195 149088  108  2  0   99  101   160 0.975  18.88
 7.04 Intr - 149719 149639   81  1  0   52   92    42 0.602   0.83
 7.03 Intr - 150241 150202   40  0  1   80  116   -10 0.939  -0.77
 7.02 Intr - 151610 151525   86  2  2   81   79   118 0.923   8.82
 7.01 Init - 151844 151773   72  2  0   71   82    55 0.663   4.27
 7.00 Prom - 157520 157481   40                              -3.26

 8.00 Prom + 157809 157848   40                              -6.96
 8.01 Init + 161598 161600    3  2  0   71  101     0 0.685  -0.40
 8.02 Intr + 163058 163142   85  1  1  131  116    54 0.961  11.89
 8.03 Intr + 186168 186245   78  1  0   88  110    55 0.924   7.22
 8.04 Term + 196156 196298  143  2  2   80   38    64 0.242  -1.31
 8.05 PlyA + 197426 197431    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 146372 146215  158  0  2  100   48   123 0.977   7.60
S.002 Init + 153108 153159   52  2  1  123  105    85 0.939  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_1|152_aa
GYINSPVLCHNLIQRDLEHFLLLQDITLVHYNDDIMMTRSSEQEVANTLDLLAVSMDDDD
CWQNRGVVVKNSSPQAQATDWYWSMTCYEPSHTAEDGTIKLQENKLRAPTDSTLCTMYNS
KDMEPTQIAINDRRDKENVAYKHPGILRSHKK

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_1|459_bp
gggtatatcaactctccggttttgtgtcataatcttattcagagagaccttgaacacttt
ttgcttctgcaagatatcacactggtccattacaatgatgacattatgatgactagatcc
agtgaacaagaagtagcaaacacactggacttattggcagtgagcatggatgatgatgat
tgctggcaaaacaggggagtggtagtgaagaacagcagtccccaggcccaggccacagat
tggtactggtccatgacctgttacgaaccgagccacacagcagaagatgggaccatcaag
ttgcaggaaaacaagctcagggctcccactgattctacattatgcactatgtacaatagc
aaagacatggaaccaacccaaattgccatcaacgatagaagggataaagaaaatgtggca
tataaacaccctggaatactacgcagccataaaaaatga

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_2|180_aa
MEEVRVSWIEDQTSHNIPLSQNLIKALPVFNSVKAERSICVHQCRKDGDYKEGKCCIRKG
CWHIFVPPPQNLIPKQTHAFLLSAKSELEKTNSVPVGFPIFGWLAGLPPQPLSRLLSRSW
ASVCISEEKTGTVEGKTAVCEMFHVRGKQHIQIPKLSTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_2|543_bp
atggaggaagttcgagtgtcctggatagaagatcaaaccagccacaacattcccttaagc
caaaacctaatcaaagccctacctgtcttcaactctgtcaaggctgagagaagcatctgt
gtgcaccaatgcagaaaagacggggactacaaggaaggaaaatgttgcatcaggaagggc
tgctggcacatctttgttccccctccccaaaacctcatccccaagcagacccatgcgttc
ctgctctctgccaagtccgaactggagaaaacaaattctgtcccagtggggtttcccatc
tttggctggctggctggacttcctccacaaccactctctcgccttctaagcaggagctgg
gcttctgtgtgcatcagtgaagagaagacggggactgtggaagggaaaacagcagtctgt
gagatgtttcatgtccgaggcaaacagcacattcagatccccaagctctccacctccagt
gtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcctttggacctcagc
taa

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_3|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEM
KLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_3|1344_bp
atggacgtggtagaggtcgcgggtagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacattgaggaaatg
aagttgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacataagcgggacattaaggaagcatatgttcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcaggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaacgccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_4|265_aa
METKEPIVYTGSVERAPGPFGALATSSLDHTMEAGSPVGTTRASCDLQFLLPGVWGAHSG
EHGTPHTPHFEDAGRCERVDASTTCLHMCVCTCIVLAHLRVSRESGAQHVLAPAGTLSRR
RGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDGPG
FGVLSVPPHRVVAFSLGITPSRGAADPKSSMSSPRPAHRPRPRPLPRPDQRALEQCPLEK
AERSHPPCTRAAKNSHVPEYVSAAV

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_4|798_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgggcctttt
ggagccctggccacgtcctccctggatcacacgatggaagctggcagccccgtgggcacc
actcgagccagctgtgacctgcagtttctgcttcctggagtgtggggcgcccactcagga
gagcacggcacaccccacacccctcattttgaggatgctgggaggtgtgagcgagtggat
gcttccactacgtgtctgcacatgtgtgtgtgcacttgcattgtccttgcacacctgcgt
gtgtcccgtgagagcggagcccagcatgtgctggcacctgcaggaacattgtcacgacga
cgaggatggggaccatatcttcggagcctgaggatccaacacaggtccagccctgtgcag
ccgcccgccaagccgccagaggacgagccggacgccgaaggctacgagtggacgattgca
gttagtttccaactcgccgacttcgcgcccctccactggctccggcttgatggtcccggc
ttcggggtgctctcggtccctccccatcgcgtcgtcgctttctcccttggcataaccccc
agccgcggggccgcagaccctaagagctccatgagctctccgcgccctgcccaccggccc
cggccccgacccctccccagaccggaccagagagctttggaacaatgtcctctagaaaaa
gctgaacgtagccacccaccttgtacgagagccgcaaagaatagccatgtgcctgaatat
gtgtcagccgctgtgtga

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_5|93_aa
MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_5|282_bp
atgcaggtctccactgctgcccttgccgtcctcctctgcaccatggctctctgcaaccag
gtcctctctgcaccacttgctgctgacacgccgaccgcctgctgcttcagctacacctcc
cgacagattccacagaatttcatagctgactactttgagacgagcagccagtgctccaag
cccagtgtcatcttcctaaccaagagaggccggcaggtctgtgctgaccccagtgaggag
tgggtccagaaatacgtcagtgacctggagctgagtgcctga

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_6|245_aa
MKLCVTVLSLLVLVAAFCSLALSAPIKLGAYGGQVINGVLAQVQLTVGPVGPWIHPVVIS
PMTECVIGIDIFNSWQNPYIGSLTGIDLANAFFSIPVHKAHQKQFAFSWQGQQYTFTVLP
HGYINSPALRHNLIQRDLDHFLLLKDITLVHYNDIMMIGSSEQKVANTLDLLVETELKLI
CGDVLDVLDKHLIPAATTGKSKAVCEMFDVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQ
PLDRS

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_6|738_bp
atgaagctctgcgtgactgtcctgtctctcctcgtgctagtagctgccttctgctctcta
gcactctcagcaccaattaaattaggggcttatggaggtcaggtaattaatggagtttta
gctcaggtccaacttacagtgggcccagtgggtccctggattcatcctgtggtcatttcc
ccaatgacagaatgtgtaattggcatagatatattcaacagctggcagaacccctacatt
ggctccctgactggtattgacttagcaaatgcctttttctccattcctgtccataaggcc
caccagaagcaatttgccttcagctggcaaggtcagcaatatacctttactgtcctacct
cacgggtatatcaactctccagctttgcgtcataatcttattcagagagaccttgatcac
tttttgcttctgaaagatatcacactggtccattacaatgacattatgatgattggatcc
agtgagcaaaaagtagcaaacacactggacttattggttgagactgagctaaagttaatc
tgtggcgacgttctggatgtactggacaaacacctcattccagcagctacaactggcaag
tccaaggcagtctgtgagatgtttgatgtccgaggcaaacagcacattcagatccccaag
ctctacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacag
cctttggaccgcagctaa

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_7|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEM
KMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAAQAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNSIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_7|1344_bp
atggacgtggtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatg
aagatgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccaggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcgggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaactccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581f:36111142_36312566|GENSCAN_predicted_peptide_8|102_aa
MVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL
KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEVWVILL

>gi568815581f:36111142_36312566|GENSCAN_predicted_CDS_8|309_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcagaat
gaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacgggaacctta
aagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaagtat
actaccccttctggagaggtgcgctatgctgctgtaacacagtttgaggtatgggttatt
cttctctaa