Result of FASTA (ccds) for pF1KB6763
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6763, 113 aa
  1>>>pF1KB6763 113 - 113 aa - 113 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7432+/-0.000599; mu= 13.1875+/- 0.036
 mean_var=58.1314+/-11.190, 0's: 0 Z-trim(111.7): 39  B-trim: 8 in 1/50
 Lambda= 0.168217
 statistics sampled from 12522 (12562) to 12522 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.386), width:  16
 Scan time:  1.600

The best scores are:                                      opt bits E(32554)
CCDS11304.1 CCL15 gene_id:6359|Hs108|chr17         ( 113)  754 190.2 2.3e-49
CCDS59282.1 CCL23 gene_id:6368|Hs108|chr17         ( 120)  541 138.5 8.9e-34
CCDS11305.1 CCL23 gene_id:6368|Hs108|chr17         ( 137)  312 83.0 5.3e-17
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17         ( 109)  269 72.5 6.1e-14
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17      (  93)  243 66.1 4.3e-12
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17          (  92)  235 64.2 1.6e-11


>>CCDS11304.1 CCL15 gene_id:6359|Hs108|chr17              (113 aa)
 initn: 754 init1: 754 opt: 754  Z-score: 999.6  bits: 190.2 E(32554): 2.3e-49
Smith-Waterman score: 754; 100.0% identity (100.0% similar) in 113 aa overlap (1-113:1-113)

               10        20        30        40        50        60
pF1KB6 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
               10        20        30        40        50        60

               70        80        90       100       110   
pF1KB6 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
               70        80        90       100       110   

>>CCDS59282.1 CCL23 gene_id:6368|Hs108|chr17              (120 aa)
 initn: 541 init1: 308 opt: 541  Z-score: 719.9  bits: 138.5 E(32554): 8.9e-34
Smith-Waterman score: 541; 74.5% identity (88.2% similar) in 110 aa overlap (1-109:1-110)

               10        20        30        40         50         
pF1KB6 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFH-FAADCCTSYIS
       ::::::::::::::..:::::. :.:::::.:::::::::::.:. ::  .:::: ::  
CCDS59 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB6 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI      
       .::::::..:::::.::::::::::::::::. ::.::   :: ::. ::          
CCDS59 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCMRMLKLDTRIKTRKN
               70        80        90       100       110       120

>>CCDS11305.1 CCL23 gene_id:6368|Hs108|chr17              (137 aa)
 initn: 524 init1: 308 opt: 312  Z-score: 418.7  bits: 83.0 E(32554): 5.3e-17
Smith-Waterman score: 498; 64.6% identity (77.2% similar) in 127 aa overlap (1-109:1-127)

               10        20        30        40                    
pF1KB6 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLN---------------
       ::::::::::::::..:::::. :.:::::.:::::::::::.:.               
CCDS11 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH
               10        20        30        40        50        60

             50        60        70        80        90       100  
pF1KB6 --SFH-FAADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQ
         .::  .:::: ::  .::::::..:::::.::::::::::::::::. ::.::   ::
CCDS11 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
               70        80        90       100       110       120

            110         
pF1KB6 DCMKKLKPYSI      
        ::. ::          
CCDS11 VCMRMLKLDTRIKTRKN
              130       

>>CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17              (109 aa)
 initn: 267 init1: 216 opt: 269  Z-score: 363.8  bits: 72.5 E(32554): 6.1e-14
Smith-Waterman score: 269; 36.4% identity (75.5% similar) in 110 aa overlap (1-109:1-107)

               10         20        30        40        50         
pF1KB6 MKVSVAALSCLMLVAV-LGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYIS
       ::.::::.  ..:... ::.... ....  .  . :. :.  .: . .:  ..:: .: .
CCDS45 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK--LVGGPYH-PSECCFTYTT
               10        20        30        40           50       

      60        70        80        90       100       110   
pF1KB6 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
        .:: . . .:.::.:.:::::..:.::.:..::..::   ::: .: .:    
CCDS45 YKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN  
        60        70        80        90       100           

>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17           (93 aa)
 initn: 280 init1: 233 opt: 243  Z-score: 330.6  bits: 66.1 E(32554): 4.3e-12
Smith-Waterman score: 243; 48.3% identity (69.0% similar) in 87 aa overlap (27-109:6-90)

               10        20        30        40        50          
pF1KB6 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAAD----CCTS
                                 :   ...  . : : :.  :  .:::    :: :
CCDS32                      MQVSTAALAVLLCTMALCNQVL--SAPLAADTPTACCFS
                                    10        20          30       

         60        70        80        90       100       110   
pF1KB6 YISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
       : :..:: ... .::::::.::::.::::::.:::::: ::   ::  .. :.    
CCDS32 YTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA 
        40        50        60        70        80        90    

>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17               (92 aa)
 initn: 275 init1: 233 opt: 235  Z-score: 320.2  bits: 64.2 E(32554): 1.6e-11
Smith-Waterman score: 237; 42.2% identity (66.1% similar) in 109 aa overlap (1-109:1-89)

               10        20        30        40        50        60
pF1KB6 MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
       :.::.:::. :. . .: .:  :.         ..:  ..:..         :: :: :.
CCDS11 MQVSTAALAVLLCTMALCNQ--FS---------ASLAADTPTA---------CCFSYTSR
               10        20                   30                 40

               70        80        90       100       110   
pF1KB6 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI
       .:: ... .::::::.:::::::::::..::::: ::   ::  .. :.    
CCDS11 QIPQNFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA 
               50        60        70        80        90   




113 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:51:08 2016 done: Fri Nov  4 23:51:08 2016
 Total Scan time:  1.600 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]
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