GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:16:39

Sequence gi568815591f:139241385_139445701 : 204317 bp : 41.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10572  10673  102  2  0   99   68   153 0.999  13.85
 1.02 Intr +  17104  17241  138  0  0   22  113   141 0.989   9.74
 1.03 Intr +  17883  17986  104  2  2  118   71   179 0.999  17.25
 1.04 Intr +  19868  20357  490  2  1   86   86   434 0.995  35.08
 1.05 Intr +  24949  25019   71  0  2  106   83    39 0.874   2.26
 1.06 Intr +  28010  28139  130  2  1   44  110   124 0.968   9.98
 1.07 Intr +  30938  31104  167  1  2  104   54   120 0.353   8.04
 1.08 Intr +  31913  32026  114  2  0   62  110   188 0.995  17.04
 1.09 Intr +  32547  32690  144  0  0   40  116    89 0.966   5.38
 1.10 Intr +  37934  37976   43  2  1   54  115    36 0.903   0.22
 1.11 Intr +  41640  43190 1551  2  0   16   91  1070 0.717  88.67
 1.12 Intr +  51848  52079  232  1  1   52   89   120 0.671   4.92
 1.13 Intr +  52505  52597   93  0  0   92   93    59 0.933   5.82
 1.14 Intr +  56533  56624   92  2  2   39   61    51 0.047  -3.71
 1.15 Term +  80421  80552  132  2  0  130   45   175 0.779  14.51
 1.16 PlyA +  80909  80914    6                               1.05

 2.00 Prom +  80967  81006   40                              -4.25
 2.01 Init +  86847  86941   95  2  2   77   33    60 0.613  -0.70
 2.02 Term +  87854  87971  118  2  1  114   53   117 0.903   7.83
 2.03 PlyA +  89897  89902    6                               1.05

 3.00 Prom +  94395  94434   40                              -8.15
 3.01 Init +  98806  99133  328  0  1   93   65   274 0.781  23.13
 3.02 Intr +  99927 100138  212  1  2   -7   63   332 0.778  18.91
 3.03 Intr + 104117 104269  153  1  0   82   60   115 0.764   7.45
 3.04 Intr + 118632 118938  307  2  1   48  127   268 0.681  21.80
 3.05 Intr + 134073 134195  123  1  0   80   20   126 0.882   4.64
 3.06 Intr + 134678 134772   95  0  2   80   40    56 0.015  -1.24
 3.07 Intr + 157215 157313   99  2  0  121   42   110 0.741   9.09
 3.08 Intr + 160753 160863  111  0  0   66  116   123 0.901  12.56
 3.09 Intr + 164260 164403  144  0  0  119   84   167 0.999  18.96
 3.10 Intr + 165790 165966  177  0  0   63   83   185 0.999  14.69
 3.11 Intr + 168179 168270   92  1  2   64   64   111 0.174   4.17
 3.12 Intr + 176154 176345  192  0  0    8   57   264 0.159  12.99
 3.13 Term + 180779 180956  178  2  1   62   36   191 0.768   7.48
 3.14 PlyA + 181746 181751    6                               1.05

 4.03 PlyA - 182029 182024    6                               1.05
 4.02 Term - 196590 196422  169  2  1  104   42    90 0.234   2.37
 4.01 Intr - 204151 204055   97  2  1   99   59    35 0.103  -0.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 135283 135395  113  2  2   67   44   139 0.920   5.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:139241385_139445701|GENSCAN_predicted_peptide_1|1200_aa
GGKPRKHRKDRLQDLIDIGFGYDETDPFIDNSEAYDELVPASLTTKYGGFYINTGTLQFR
QASDTEEDDITDNQKHKPPKVPKIKEDDIEMKKRKRKEEGEKEKKPRKKVPKQLGVVALN
SHKSEKKKKRYKDSLSLAAMIRKFQKEKDALKKESNPKVPVTLSTPSLNKPPCAAAALGN
DVPDLNLSSGDPDLPIFVSTNEHELFQEAENALEMLDDFDFDRLLDAASDGSPLSESGGE
NGTTTQPTYTSQVMPKVVPTLPEGLPVLLEKRIEDLRVAAKLFDEEGRKKFFTQDMNNIL
LDIELQLQELGPVIRSGVYSHLEAFVPCNKETLVKRLKKLHLNVQDDRLREPLQKLKLAV
SNVMPEQLFKYQEDCQARSQAKCAKYVSLLFGLAFAFEKCILQTDEEREKNGSEEDDDEK
PGKRVIGPRKKFHWDDTIRTLLCNLVEIKLGCYELEPNKSQSAEDYLKSFMETEVKPLWP
KGWMQARAKKKVIPAPKPKVKECSPKKDQKTPTSLVASVSGPPTSSSTAAIAAASSSSAP
AQETICLDDSLDEDLSFHSPSLDLVSEALAVINNGNKGPPVGSRISMPTTKPRPGLREEK
LASIMSKLPLATPKKLDSTQTTHSSSLIAGHTGPVPKKPQDLAHTGISSGLIAGSSIQNP
KVSLEPLPARLLQQGLQRSSQIHTSSSSQTHVSSSSQAQIAASSHALGTSEAQDASSLTQ
VTKVHQHSAVQQNYVSPLQATISKSQTNPVVKLSNNPQLSCSSSLIKTSDKPLMYRLPLS
TPSPGNGSQGSHPLVSRTVPSTTTSSNYLAKAMVSQISTQGFKSPFSMAASPKLAASPKP
ATSPKPLPSPKPSASPKPSLSAKPSVSTKLISKSNPTPKPTVSPSSSSPNALVAQGSHSS
TNSPVHKQPSGMNISRQSPTLNLLPSSRTSGLPPTKNLQAPSKLTNSSSTGTVGKNSLSG
IAMNVPASRGSNLNSSGANRTSLSGGTGSGTQGATKPLSTPHRPSTASGSSVVTASVQST
AGASLLANASPLTLMTSPLSVTNQNVTPFGMLGGLVPVTMPFQFPLEIFGFGTDTAGVTT
TSGSTSAAFHHSLTQNLLKGLQPGGAQHAATLSHSPLPAHLQQAFHGLLFLSMFTFSRPK
HCGEEEKEKKTLLEQSQDSSRPGTAASKAGGGSMRKRNDTDRDPTDSRLEEERGFQVNDI

>gi568815591f:139241385_139445701|GENSCAN_predicted_CDS_1|3603_bp
ggtgggaaaccccgtaaacaccggaaggatcggctacaagatttaattgatataggcttt
ggctatgatgagacagatccatttattgataactcagaggcttatgatgaattagttccc
gcttctctaacaacaaaatatggaggcttttatatcaacactggcactctacagtttcgc
caagcttcagatactgaagaagatgatattacagacaaccaaaagcacaagccacccaag
gtccccaaaataaaagaagatgatattgagatgaagaagcggaagcggaaagaggaaggg
gaaaaggagaagaagccaaggaaaaaagttcccaaacaactgggagttgtggctctaaat
tcacacaagtctgaaaaaaagaagaaacgttataaagattctctttctctagctgccatg
attagaaaattccagaaagagaaggatgcattaaagaaggagtctaaccccaaagtccca
gtgaccttgtcaaccccttctctgaataaacccccatgtgctgctgcagcactggggaat
gacgtcccggacttaaatctgagcagcggtgatccagaccttcccatttttgttagcaca
aatgaacatgagctgtttcaggaagctgaaaatgccctagagatgctagatgattttgac
ttcgacagattactggatgctgcttctgatggtagccccctatctgagtcggggggtgaa
aatggaaccaccacccagccaacctacacttctcaggttatgcccaaagtggtacctaca
ctcccagagggtctacctgtacttcttgaaaaacgtatcgaagaccttcgtgtagctgcc
aaactttttgatgaagaaggaaggaaaaaattctttacacaggatatgaataatattctt
ctggacattgagttacagctacaagaactaggccctgtcattcgcagtggtgtctactcc
caccttgaagcttttgtgccatgcaataaagaaacactagtaaaacgtctgaagaagtta
catctcaatgtccaggatgatcgtttaagagaacctctgcaaaaactgaaactggctgtt
agcaatgtcatgcctgaacagctatttaaataccaggaggactgccaggctcgtagtcaa
gctaagtgtgccaagtatgtatctcttctatttggactggcttttgcatttgagaagtgt
atattgcagacagatgaagaacgagaaaaaaatggatctgaagaggatgatgatgagaaa
ccaggaaaacgtgtcataggaccaagaaagaaattccactgggatgacactatcagaact
ttgttatgtaaccttgttgagatcaaattgggatgctatgagttagaaccaaataaaagc
cagtctgctgaagattatcttaagtcttttatggagacagaagtgaagcccctgtggcct
aagggctggatgcaggcaagggcaaagaaaaaggtgattcctgcacctaaacccaaagta
aaggagtgtagtccaaaaaaggaccagaaaactccaacatccctggtggcttcggttagc
ggtcctccaacgagctccagcacagctgccattgctgcagctagctctagctctgcacca
gcccaagaaaccatctgcctcgacgactcactagatgaagacctttctttccattcacct
tcactggatcttgtttctgaagctttagcggttatcaacaatgggaacaagggccctcca
gttggctcaaggataagcatgccaaccacaaagcctcgtccaggactgagagaagaaaaa
ttagcaagtatcatgagtaagctgccactagctactcccaaaaaactagattctactcag
actacacattcttcaagtcttattgctggtcacacagggccagtaccaaagaaaccccag
gatttagctcatactggcatctcttcaggccttattgctggttcttccattcagaaccct
aaagtttctttagaacctttgccagccaggctacttcaacaaggacttcagaggtcaagc
cagattcacacttcttcctcttcacagacccatgtctcctcttcttcccaagcccaaatt
gctgcctcttctcatgctctgggaacatccgaggcccaagatgcttcttcgttaacacaa
gtaacaaaggtgcaccagcattcagctgtccagcagaactatgtgtctccattacaggcc
accatcagtaaatcccagaccaaccccgtcgtgaagttaagtaataatccccaactctcc
tgttcctcctcacttattaagacttcagataagccacttatgtaccgccttcccttatct
accccctcacctggaaatggttctcaagggtcccaccccctggtttctaggacagtacct
agcaccactacctccagtaactatttagccaaggctatggtgtcacagatctccacgcag
ggtttcaaatctcccttctcgatggctgcctccccaaaacttgccgcatctcccaagcct
gccacatctcctaaacccctgccctcgcctaagccttctgcctcacccaagccctctctg
tcagctaagccttcagtatcaactaaacttatttctaaatccaacccaactcccaagcct
actgtatccccaagtagttccagtccaaatgcactagttgcccagggtagccactccagc
actaacagcccagtccataaacagcccagtggaatgaacatcagcagacagtctcccacc
ttgaatttattgccctctagtcgcacttcaggccttccacctacaaaaaatcttcaggcc
ccctcaaagctaacaaactcatcatccactggaactgttgggaagaacagcttgagtgga
attgcaatgaatgtacctgccagcagaggtagcaaccttaactcaagcggagctaatagg
actagtctgtctgggggaacaggaagtggaacacagggtgctaccaaaccattgtctact
ccacatagaccatccactgcctcagggtcttcagtggtaacagccagtgtgcagtccaca
gcaggagcatcattattggctaatgcctcacctctgactctcatgacatcacctttgtct
gtaacaaatcaaaatgtgactccttttgggatgctgggtggccttgttccagtgaccatg
cccttccagtttcccttggagatatttggctttggaacggacacagctggagtgacaacc
acctcgggatctacctcagccgctttccaccatagcctaactcagaatttactaaagggt
ttacagccaggaggagctcagcatgcagcaacgctttcccactcacctctgcctgcacac
ttacagcaagcatttcacgggctgctgtttctgtcgatgtttacattctctcgtcccaag
cactgtggtgaggaggaaaaagaaaagaaaacattacttgagcaaagccaggacagcagc
aggccagggacagcagccagcaaggccggaggaggcagtatgagaaagagaaatgacact
gaccgtgaccccacggactccaggctggaggaggagagagggtttcaagtcaatgacatt
tga

>gi568815591f:139241385_139445701|GENSCAN_predicted_peptide_2|70_aa
MMEGEEEARHILHGGRGESGGESATLLNHQLLGLALEMSLNNLDPDKKGQGEIGYSCDSP
SQPLFQLLIC

>gi568815591f:139241385_139445701|GENSCAN_predicted_CDS_2|213_bp
atgatggaaggtgaagaagaagcaaggcatatcttacatggtggcaggggagagagtgga
ggggaaagtgccacacttttaaaccatcagctcttgggccttgccttagagatgtctctg
aacaatttggaccctgacaagaagggtcaaggagaaatcggatactcttgtgattccccc
agtcaaccactgttccagttgcttatctgctga

>gi568815591f:139241385_139445701|GENSCAN_predicted_peptide_3|736_aa
MASTLQPEAEIDRGRRHLTAAGAKLLLEIRNTGKGPAASGKNPPELTFRGRVSKIRPICP
ARCAPRRRMPAFAQARGLRRRRGDYCAGKRVRRSVRAPVQRPEHRCSFEGAWAGGGVFRV
VGRRWAPRSEKDRTMAALGSPSHTFRGLLRELRYLSAATGRPYRDTAAYRYLVKAFRAHR
VTSEKLCRAQHELHFQAATYLCLLRSIRKHVALHQEFHGKGERSVEESAGLNRTESEGTR
VAVGGCRLPRTRRREERSPDSSRNPSGSLSARLEAAAATETAAHLPPSLPLIPQPKRARS
APHPRPSARYAAAMSAQAQMRAMLDQLMGTSRDGLYALKRVILPSLTPPSSKRETLQLEQ
NSGRNGVWGSVGIRRDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLA
LRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAERV
HELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQK
LRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKR
REEREREEREKLRRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH
QRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANG
RSEDRRSSEEREAGEI

>gi568815591f:139241385_139445701|GENSCAN_predicted_CDS_3|2211_bp
atggcctcaacgcttcaaccggaagcagaaattgaccgcggcaggcgccatctaacggcc
gctggagcaaagctcctcctggaaattcgcaacaccggaaaaggtccggctgcttccggt
aaaaacccaccagagctgacgttcagagggcgagtctcgaagatccggccaatttgccca
gcgcgctgtgctccgcgacggcgcatgcccgcttttgcgcaggcgcggggactacggcgc
aggcgcggagactattgcgcaggcaagcgcgtacgcagaagcgtgcgcgcgcccgttcaa
cgtccggagcatcggtgcagtttcgagggcgcctgggccggaggaggggttttcagggtc
gtaggacgccgttgggcaccacgctcggagaaggacaggacaatggcggccttagggtcc
ccgtcgcacacttttcgaggacttctgcgggagttgcgctacctgagcgcggccaccggc
cgaccctatcgcgacaccgcggcctatcggtaccttgtgaaggctttccgtgcacatcgg
gtcaccagtgaaaagttgtgcagagcccaacatgagcttcatttccaagctgccacctat
ctctgcctcctgcgtagcatccggaaacatgtggccctacatcaggaatttcatggcaag
ggtgagcgctcggtggaggagtctgctggcttgaaccggacggagagtgagggcacgagg
gtcgctgtcgggggctgtcgtcttccacgtacacgtcgtcgtgaggagcgcagtccggac
tcttcccgcaacccctccggctccctttccgcacgcctcgaggcggcggcggccaccgag
acagcagcgcaccttcccccatcccttccccttatcccccagcccaaaagggcccggtct
gcgccccacccccgcccgtccgcccgctacgccgccgccatgtcggcgcaggcccagatg
cgcgcgatgctggaccagttgatgggcacctcccgggacggtttgtacgctcttaaacgc
gttattctaccctctctaactcctcccagcagcaaaagggagacacttcagctggaacaa
aatagtggaagaaatggcgtctggggttcagtggggattcgcagagatacaactcgtcaa
cgaatcaaattcagtgatgacagagtatgcaagagtcaccttctcaactgttgtcctcat
gatgtcctttctggaactagaatggatcttggagaatgtctgaaagtccatgacctggct
ttaagagcggattatgaaattgcatccaaagaacaagattttttctttgaacttgatgcc
atggatcatctgcagtcattcattgcagattgtgatcgtagaacagaagtggccaagaaa
agattagcagaaactcaagaagagattagtgctgaagtagcagcaaaggcagaacgtgtt
catgagttaaatgaagaaattggtaaattgttagccaaggtggaacaactaggagctgaa
gggaatgtggaggaatcccagaaagtaatggatgaagtagagaaagcacgggcaaagaaa
agagaagcagaggaagtttatcggaattctatgccagcttccagttttcagcagcagaaa
cttcgagtctgtgaagtctgctctgcctatttaggacttcatgataatgacagacgactg
gctgatcattttgggggtaaactgcacctgggatttattgaaataagagagaagcttgaa
gaattaaagagagtcgtagctgagaagcaggagaaaagaaaccaggaacggctgaaacga
agagaagagagagagagagaagaaagggagaagctgaggagatccaggtccagagagcat
cgcagacatcgatctcgctccatgtcacgtgaacgcaagaggagaactcgatccaaatct
cgggagaaacgccatcgccacaggtcccgctccagcagccgtagccgcagccgtagccac
cagagaagtcggcacagttctagagataggagcagagaacgatccaagaggagatcctca
aaagaaagattcagagaccaagacttagcatcatgtgacagagacaggagttcaagagac
agatcacctcgtgacagagatcggaaagataagaagcggtcctatgagagtgctaatggc
agatcagaagacaggaggagctctgaagagcgcgaagcaggggagatctaa

>gi568815591f:139241385_139445701|GENSCAN_predicted_peptide_4|88_aa
XVSQAHLSLLLPSSSPSMAEITCFEIICVLDYAPLAGATETAKLSGQGWGSPASPEVDEA
AGSGGKGHGCRERQRTGPEMISNTQSLL

>gi568815591f:139241385_139445701|GENSCAN_predicted_CDS_4|267_bp
nctgtttctcaagcccacctgtcacttctccttccctcttcatctccttccatggctgaa
atcacctgctttgaaatcatctgtgtgcttgattatgcgccactagctggagccacagaa
acagccaaactcagtgggcaggggtgggggagtccagccagtcctgaagtagatgaagct
gcaggctcaggtggcaaagggcatggatgcagggagaggcaaagaactggaccagagatg
atctcaaacacacaatccctcctgtga