GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:43:55

Sequence gi568815578r:37029023_37279480 : 250458 bp : 44.73% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.33 Intr -   6486   6220  267  1  0   92   52   105 0.808   4.80
 1.32 Intr -  11263  11131  133  1  1   87   92    66 0.991   7.12
 1.31 Intr -  15228  15064  165  0  0  121   81    67 0.986   9.46
 1.30 Intr -  18168  18031  138  0  0  128  100    21 0.708   7.96
 1.29 Intr -  32247  32152   96  0  0   96   39    61 0.249   2.21
 1.28 Intr -  33248  33062  187  1  1   58   24   183 0.472   8.59
 1.27 Intr -  36451  36402   50  1  2   73   67    23 0.949  -3.82
 1.26 Intr -  37862  37702  161  0  2   65   79   142 0.992  10.71
 1.25 Intr -  38099  37971  129  0  0   69  116     9 0.820   2.47
 1.24 Intr -  43721  43574  148  2  1   64   19    73 0.001  -2.19
 1.23 Intr -  66217  66079  139  0  1   98   27    79 0.630   3.27
 1.22 Intr -  67003  66737  267  0  0   24   75   353 0.140  24.25
 1.21 Intr -  73813  73678  136  2  1   67   28   112 0.167   2.73
 1.20 Intr -  79642  79577   66  2  0   91  127    38 0.970   6.88
 1.19 Intr -  83424  83298  127  0  1   88   47    64 0.792   2.55
 1.18 Intr -  85123  84968  156  1  0   95   94   140 0.999  15.51
 1.17 Intr -  86315  86151  165  2  0   38   58   132 0.469   5.36
 1.16 Intr -  91596  91482  115  2  1   92   94    30 0.730   4.45
 1.15 Intr -  94777  94587  191  1  2  104   29   156 0.476   9.68
 1.14 Intr - 100145 100010  136  1  1   58   61    82 0.874   3.07
 1.13 Intr - 108948 108788  161  0  2  111   92    12 0.539   2.69
 1.12 Intr - 112292 112140  153  2  0   62   92    50 0.842   3.07
 1.11 Intr - 114819 114695  125  1  2   84   90    96 0.996   9.70
 1.10 Intr - 118887 118752  136  0  1   84   56    36 0.931   0.14
 1.09 Intr - 126145 126041  105  1  0   98  105    83 0.910  11.41
 1.08 Intr - 128933 128838   96  2  0   81   92    15 0.709   1.41
 1.07 Intr - 130014 129870  145  2  1   52   78    83 0.956   3.98
 1.06 Intr - 131154 131075   80  0  2  136   64    78 0.978   8.55
 1.05 Intr - 132644 132607   38  0  2   83  100    29 0.698   1.58
 1.04 Intr - 138518 138435   84  0  0   50   70    77 0.568   1.89
 1.03 Intr - 143035 142901  135  2  0   28   89   124 0.843   7.04
 1.02 Intr - 145094 144973  122  1  2  112   98    88 0.994  12.34
 1.01 Init - 145264 145248   17  1  2   53   88   -26 0.076  -6.22
 1.00 Prom - 148805 148766   40                              -5.66

 2.00 Prom + 148935 148974   40                              -8.16
 2.01 Init + 149216 149229   14  1  2   72   66    12 0.086  -4.19
 2.02 Intr + 150230 150347  118  2  1   73   76   139 0.121  11.67
 2.03 Intr + 150453 150543   91  2  1   44   -5    94 0.085  -4.73
 2.04 Intr + 155158 155351  194  2  2   47  116   216 0.869  19.51
 2.05 Intr + 169375 169470   96  0  0   53  105    71 0.957   5.51
 2.06 Intr + 170028 170203  176  2  2   99   69   124 0.987  10.34
 2.07 Intr + 174863 174938   76  2  1   90   48    76 0.996   3.32
 2.08 Intr + 175745 175879  135  1  0   79   67   135 0.942  11.26
 2.09 Intr + 178251 178427  177  2  0   53   94   261 0.885  23.32
 2.10 Intr + 181025 181143  119  1  2   80  110    44 0.937   5.06
 2.11 Intr + 184738 184843  106  1  1   77   92   131 0.989  12.62
 2.12 Intr + 194856 194947   92  2  2   98   94    97 0.995  10.09
 2.13 Intr + 196666 196780  115  1  1   81   71   145 0.986  12.55
 2.14 Intr + 199528 199722  195  0  0   39   68   201 0.914  12.81
 2.15 Intr + 200951 201037   87  1  0   98   76    75 0.954   7.47
 2.16 Intr + 203274 203369   96  2  0   72  105    85 0.935   8.81
 2.17 Intr + 204998 205073   76  1  1   67  119    60 0.999   6.09
 2.18 Intr + 207558 207687  130  1  1   81   94   184 0.914  18.05
 2.19 Term + 210591 210672   82  0  1  117   38    13 0.278  -3.63
 2.20 PlyA + 212575 212580    6                               1.05

 3.10 PlyA - 213846 213841    6                               1.05
 3.09 Term - 213987 213958   30  0  0  103   39    37 0.264  -1.85
 3.08 Intr - 214709 214571  139  1  1   97   19    96 0.227   4.07
 3.07 Intr - 225307 225188  120  0  0   54   80    95 0.635   4.91
 3.06 Intr - 227476 227372  105  0  0  106   86   218 0.990  22.73
 3.05 Intr - 227647 227592   56  1  2   73   84   -27 0.419  -6.82
 3.04 Intr - 227886 227785  102  0  0  129  115     8 0.511   7.97
 3.03 Intr - 232650 232602   49  2  1   13  105    60 0.200  -1.12
 3.02 Intr - 232833 232721  113  0  2   18   94   125 0.466   5.28
 3.01 Intr - 247219 247136   84  1  0    7  111    66 0.039   0.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:37029023_37279480|GENSCAN_predicted_peptide_1|1457_aa
MKKIRRICSQEEVVIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEP
LSHSPRHLTQQDPLSEAIVEKLIQSIQKVFNVPDSSRNCLGNLGYKDKEDKIPIYAAKQG
KRNPLEAAETQKVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTI
KSIITLPSVRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKH
LVPWLQSVKDHERERATASMAQVLKCLSKHLNLKLPLRFQRLGHLVALMALLCGDPQEKV
AEEAAEGIHSLLHITLRLKYITHDKKDQQNLKRALTKCREFLELHSSAAKCFYNCPFRIA
QVFEGFLDSNELCQFIMTTFDTLKTLKHPCIQRSAGELLLTLAKNTESQFEKVPEIMGVI
CAQLSIISQPRVRQQIINTVSLFISRPKYTDIVLSFLLCHPVPYNRHLAEVWRMLSVELP
STTWILWRLLRKLQKCHNEPAQEKMAYVAVAATDALYEVFLGNRLRAATFRLFPQLLMTL
LIQIHHSIGLTMSDVDIPSGLYTEQEVPSEVTPLCALLERNQLLAQKVMYLLVPLLNRGN
DKHKLTSAGFFVEREDIKSLLPYIVDSLRETDEKIVLSAIQILLQLVRTMDFTTLAAMMR
TLFSLFGDVRSDVHRFSVTLFGAAIKSVKNPDKKSIENQVLDSLVPLLLYSQDENDAVAE
ESRQVLTICAQFLKWKLPQEVYSKDPWHIKPTEAGTICRFFVCLLSKYMDHNELRRMGTD
WIEDDLRDLLCDPEPSLCIIASQTLLLVQMARAEPKPKQRVNWLQKLMGRFSRALAQVVV
GSAPGREKEVGGRGAQPAGPEGMFEDKPHAEGAAVVAAAGEALQALCQELNLDEGSAAEA
LDDFTAIRGNYSLEVSGSRVELPVAVQQFDQSQCAHEADLSPTFPPPSEHRPDALHQCLA
LNKTNEIDPALRIHHFFTSLHQQLQIQNLKQMYLIKDIRLYAFILASSKADLFSGNFRMI
GDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAV
LCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLSSFTDNSKAVNKEYEEYVL
TVGDFDERIFLGADAEEEIGTPRKFTRDTPLGKLTAQANVEYNLQQHFEKKRSFAPSTPL
TGRRYLREKEAVITPVASATQSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLN
LQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPT
CEEVIFPNNFETGNGGNVQGHLPLMPMSPLMHPRVKEVRTDSGSLRRDMQPLSPISVHER
YSSPTAGSAKRRLFGEDPPKEMLMDKIITEGTKLKIAPSSSITAENVSILPGQTLLTMAT
APVTGTTGHKVTIPLHX

>gi568815578r:37029023_37279480|GENSCAN_predicted_CDS_1|4371_bp
atgaaaaaaataagaaggatctgtagtcaggaagaagtagtgatcccctgtgcctatgac
agtgattcagaaagtgtggatttggagctgagcaacttagagattattaaaaaaggctca
agtagcattgaactgacagacttggacatccctgacatccctggactccattgtgagccc
ctgtcacatagccccagacacctgacccaacaggacccgctcagtgaggccattgttgag
aaactgatccagtccatccagaaggttttcaatgtgcctgacagttccaggaactgtctt
gggaatttgggctacaaagacaaagaagacaaaatccctatttatgcagccaagcaaggt
aagagaaatcctctagaagcagctgaaacacaaaaggtactggtacaagaggaacgcccg
cattctctgtccagttccatgcgccaggaggtctttgtcaccatcgctgatctcagttac
caagatgtccatttgctgttgggctctgaagatcgagctgagttgttcagtcttaccatc
aagagtataatcactctgccctctgtaaggacccttacccagatacaggaaatcatgccc
aatgggacctgcaacacagagtgtctttacaggcagacgtttcaggcattctctgagatg
ctccagagtttggtggtaaaagacccacatttggaaaatcttgacaccattattaagcac
ttggtcccctggttacagtcagtcaaagaccatgagcgggaacgggccacggccagcatg
gctcaagttctgaagtgcctatccaaacatctcaacttgaagcttccactgcgattccaa
agacttggacacctagtggctctgatggcactgctctgtggggacccacaggaaaaggtg
gctgaggaggctgcagagggcattcactccctgctgcatatcaccctgaggctgaagtat
atcactcatgacaagaaagatcagcaaaacttgaaaagagcattgacaaaatgtcgagaa
ttcctggagctccacagctctgccgctaaatgcttctacaactgtcccttcagaattgcc
caggtctttgaaggttttcttgattcaaatgagctctgccagtttataatgactacattt
gataccctgaaaaccctgaaacatccctgcatccagcgatcagcaggagaattactgcta
actttggcaaaaaatacagagtcccaatttgagaaggtgccagaaattatgggagttatc
tgtgcccagttatccataatcagccagcctagagtccgccaacaaatcataaataccgtg
agtttatttatatccagacccaagtacacagatatagtgctcagcttccttctgtgtcat
ccagtgccgtataacaggcacctggctgaggtgtggagaatgctgtcggtggagcttccc
agcacgacctggattctgtggaggctcctgaggaagctgcagaaatgccataatgagcct
gcacaggagaagatggcatatgtggctgtggctgcaacagatgccctttatgaggtgttt
ttgggaaacaggcttcgagcagctacgttccgactctttcctcagcttctcatgacactg
cttatccagattcatcacagcatcggcctcaccatgtctgatgtcgacatcccaagtggc
ctgtacacagaacaggaagtgccttcagaggtcacccctttgtgcgcattgctggaaaga
aatcagctccttgcacagaaggtcatgtacttattagtccctcttcttaaccgagggaat
gataaacataaactcacatctgcaggcttttttgtggagagagaagacatcaagagcctg
ttgccatacattgtagacagcttgcgtgaaaccgatgagaagatcgttctgtcagccatc
cagatactcctgcaacttgttagaacaatggatttcactaccctggctgccatgatgagg
accctgttctccttatttggtgatgtgagatctgatgttcatcgtttctccgtgactctc
tttggagccgccataaagtctgtaaaaaacccagataagaagagtatagagaaccaagtc
ctggacagcttggtcccactacttctgtattctcaggatgaaaatgatgcagtagctgag
gagagcaggcaagtcctaactatatgtgcccagttcctgaagtggaagctgccccaagaa
gtgtactccaaagatccctggcacatcaaacctactgaagcaggaacaatctgcagattc
tttgtatgccttttatcgaagtacatggatcacaatgagctcaggaggatgggtactgac
tggatagaggacgatctgagagacctgctgtgtgaccctgagccctcgctgtgcatcatc
gcttcccagactctgttactagtccagatggcgagggccgaaccaaaacctaagcagaga
gtgaactggttgcagaagctcatgggcagattttcgcgcgctttggcgcaggtggttgtg
ggtagcgcgcctgggagggagaaagaagtcgggggccgtggcgcgcagcccgcggggcct
gaagggatgttcgaggacaagccccacgctgagggggcggcggtggtcgccgcagccggg
gaggcgctacaggccctgtgccaggagctgaacctggacgaggggagcgcggccgaagcc
ctggacgactttactgccatccgaggcaactacagcctagaggtgagcggcagcagggtg
gagctgccggtcgctgtgcagcagtttgatcaaagccaatgtgcacacgaagctgatctc
agccctacgtttcctcctccgtcagagcatcgtcctgatgctttgcatcagtgtctggct
ctgaataaaacaaatgagattgatcctgctctaagaattcaccacttcttcacttctctg
caccagcagcttcagattcaaaatctcaagcagatgtatctgataaaggatatcagatta
tatgccttcatcctagcttccagtaaagctgatctgtttagtggtaattttcggatgatt
ggggatgacttagtaaactcttatcatttacttctatgctgcttggatctgatttttgcc
aatgcgattatgtgcccaaatagacaagacttgctaaatccatcatttaaaggtttacca
tctgattttcatactgctgactttacggcttctgaagagccaccctgcatcattgctgta
ctgtgtgaactgcatgatggacttctcgtagaagcaaaaggaataaaggagcactacttt
aagccatatatttcaaaactctttgacaggaagatattaaaaggagaatgcctcctggac
ctttcaagttttactgataatagcaaagcagtgaataaggagtatgaagagtatgttcta
actgttggtgattttgatgagaggatctttttgggagcagacgcagaagaggaaattgga
acacctcgaaagttcactcgtgacaccccattagggaaactgacagcacaggctaatgtg
gagtataaccttcaacagcactttgaaaaaaaaaggtcatttgcaccttctaccccactg
accggacggagatatttacgagaaaaagaagcagtcattactcctgttgcatcagccacc
caaagtgttcttttagagcaagatatatttcatcgttccttgatggcttgttgtttggaa
attgtgctctttgcctatagctcacctcgtacttttccttggattattgaagttctcaac
ttgcaaccattttacttttataaggttattgaggtggtgatccgctcagaagaggggctc
tcaagggacatggtgaaacacctaaacagcattgaagaacagattttggagagtttagca
tggagtcacgattctgcactgtgggaggctctccaggtttctgcaaacaaagttcctacc
tgtgaagaagttatattcccaaataactttgaaacaggaaatggaggaaatgtgcaggga
catcttcccctgatgccaatgtctcctctaatgcacccaagagtcaaggaagttcgaact
gacagtgggagtcttcgaagagatatgcaaccattgtctccaatttctgtccatgaacgc
tacagttctcctaccgcagggagtgctaagagaagactctttggagaggaccccccaaag
gaaatgcttatggacaagatcataacagaaggaacaaaattgaaaatcgctccttcttca
agcattactgctgaaaatgtatcaattttacctggtcaaactcttctaacaatggccaca
gccccagtaacaggaacaacaggacataaagttacaattccattacatgnn

>gi568815578r:37029023_37279480|GENSCAN_predicted_peptide_2|724_aa
MSRLQACRESLASPVAGSWSHFPERKSARGSDSGGTCSEEWRRRGHGHKLWLGRSRIEGP
KEGCELVGVPATWRGSSTVFLLALTIIASTWALTPTHYLTKHDVERLKASLDRPFTNLES
AFYSIVGLSSLGAQVPDAKKACTYIRSNLDPSNVDSLFYAAQASQALSGCEISISNETKD
LLLAAVSEDSSVTQIYHAVAALSGFGLPLASQEALSALTARLSKEETVLATVQALQTASH
LSQQADLRSIVEEIEDLVARLDELGGVYLQFEEGLETTALFVAATYKLMDHVGTEPSIKE
DQVIQLMNAIFSKKNFESLSEAFSVASAAAVLSHNRYHVPVVVVPEGSASDTHEQAILRL
QVTNVLSQPLTQATVKLEHAKSVASRATVLQKTSFTPVGDVFELNFMNVKFSSGYYDFLV
EVEGDNRYIANTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADS
HQNFALFFQLVDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKI
EFDSASGTYTLYLIIGDATLKNPILWNVADVVIKFPEEEAPSTVLSQNLFTPKQEIQHLF
REPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAMLGLM
YVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKRFNGVVIYLQKNVPFLVYNSVNP
EKPL

>gi568815578r:37029023_37279480|GENSCAN_predicted_CDS_2|2175_bp
atgtcgaggctgcaagcctgccgcgagtccctggcgtcccctgtggcgggctcttggagc
cactttcccgagcggaagtcagcccgcggctcggactccggcgggacctgctcggaggaa
tggcgccgccgggggcatgggcacaagctctggctggggcgctctcggatcgagggtccg
aaggagggctgcgagctggtgggagtgcccgcgacctggcggggttcaagcactgtcttc
ctgttggccctgacaatcatagccagcacctgggctctgacgcccactcactacctcacc
aagcatgacgtggagagactaaaagcctcgctggatcgccctttcacaaatttggaatct
gccttctactccatcgtgggactcagcagccttggtgctcaggtgccagatgcaaagaaa
gcatgtacctacatcagatctaaccttgatcccagcaatgtggattccctcttctacgct
gcccaggccagccaggccctctcaggatgtgagatctctatttcaaatgagaccaaagat
ctgcttctggcagctgtcagtgaggactcatctgttacccagatctaccatgcagttgca
gctctaagtggctttggccttcccttggcatcccaagaagcactcagtgcccttactgct
cgtctcagcaaggaggagactgtgctggcaacagtccaggctctgcagacagcatcccac
ctgtcccagcaggctgacctgaggagcatcgtggaggagattgaggaccttgttgctcgc
ctggatgaactcgggggcgtgtatctccagtttgaagaaggactggaaacaacagcgtta
tttgtggctgccacctacaagctcatggatcatgtggggactgagccatccattaaggag
gatcaggtcatccagctgatgaacgcgatcttcagcaagaagaactttgagtccctctcc
gaagccttcagcgtggcctctgcagctgctgtgctctcgcataatcgctaccacgtgcca
gttgtggttgtgcctgagggctctgcttccgacactcatgaacaggctatcttgcggttg
caagtcaccaatgttctgtctcagcctctgactcaggccactgttaaactagaacatgct
aaatctgttgcttccagagccactgtcctccagaagacatccttcacccctgtaggggat
gtttttgaactaaatttcatgaacgtcaaattttccagtggttattatgacttccttgtc
gaagttgaaggtgacaaccggtatattgcaaataccgtagagctcagagtcaagatctcc
actgaagttggcatcacaaatgttgatctttccaccgtggataaggatcagagcattgca
cccaaaactacccgggtgacatacccagccaaagccaagggcacattcatcgcagacagc
caccagaacttcgccttgttcttccagctggtagatgtgaacactggtgctgaactcact
cctcaccagacatttgtccgactccataaccagaagactggccaggaagtggtgtttgtt
gccgagccagacaacaagaacgtgtacaagtttgaactggatacctctgaaagaaagatt
gaatttgactctgcctctggcacctacactctctacttaatcattggagatgccactttg
aagaacccaatcctctggaatgtggctgatgtggtcatcaagttccctgaggaagaagct
ccctcgactgtcttgtcccagaaccttttcactccaaaacaggaaattcagcacctgttc
cgcgagcctgagaagaggccccccaccgtggtgtccaatacattcactgccctgatcctc
tcgccgttgcttctgctcttcgctctgtggatccggattggtgccaatgtctccaacttc
acttttgctcctagcacgattatatttcacctgggacatgctgctatgctgggactcatg
tatgtctactggactcagctcaacatgttccagaccttgaagtacctggccatcctgggc
agtgtgacgtttctggctggcaatcggatgctggcccagcaggcagtcaagaggtttaat
ggagttgtaatttatctgcagaaaaatgtaccctttttagtgtacaattctgtgaatcct
gaaaaacctctgtag

>gi568815578r:37029023_37279480|GENSCAN_predicted_peptide_3|265_aa
VFTESENSTLKGNDEVLWSNTLTLQTAQENEEINDGNARRLPEQTPSPGPLDLSSASEQR
DICRIRNTESKRPTAILFAHGLVPPRVKDATLGVLLCDPHPQQQLPLLPTSPFDPQRRQT
QLHRGHSEGSESLLGMRRYADAIFTNSYRKVLGQLSARKLLQDIMSRQQGESNQERGARA
RLGRQVDSMWAEQKQMELESILVALLQKHSHWLSFVPSDQDTQQPLYFHPQALLPLLHTT
VHQPRTQSVFQARTGLDPIQNGIEF

>gi568815578r:37029023_37279480|GENSCAN_predicted_CDS_3|798_bp
gtattcactgaatcagagaactcgactcttaaaggaaatgatgaggtcttatggtctaat
accctcactttacagacagctcaggaaaatgaagagataaatgatgggaacgccaggcgg
ctgccagagcaaacacccagcccagggcccctggatttgagcagtgcctcggagcagagg
gatatctgccgcatcagaaacactgagtccaagaggcccaccgccatcctctttgcccat
ggactggtgccaccccgggtgaaggatgccactctgggtgttcttctttgtgatcctcac
cctcagcaacagctcccactgctccccacctccccctttgaccctcagaggaggcagaca
cagcttcacagaggtcactcagaggggtctgagtctctcttggggatgcggcggtatgca
gatgccatcttcaccaacagctaccggaaggtgctgggccagctgtccgcccgcaagctg
ctccaggacatcatgagcaggcagcagggagagagcaaccaagagcgaggagcaagggca
cggcttggtcgtcaggtagacagcatgtgggcagaacaaaagcaaatggaattggagagc
atcctggtggccctgctgcagaagcacagccactggctgtcctttgttcccagtgaccag
gacacccagcagcctttgtacttccaccctcaggccctactacccctgctccacaccact
gtccaccagccccgcacccagtctgtcttccaggcccgcacaggtctggatcccattcag
aacggcatagagttctag