GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:29:46

Sequence gi568815597f:150172818_150379735 : 206918 bp : 44.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    156    198   43  2  1   65   86    45 0.649   2.58
 1.02 Intr +    923    997   75  0  0   63  115    28 0.123   2.49
 1.03 Intr +  16933  17073  141  2  0   52   57    81 0.399   1.72
 1.04 Term +  20610  20647   38  1  2   74   47    85 0.517   0.50
 1.05 PlyA +  23103  23108    6                               1.05

 2.02 PlyA -  25762  25757    6                               1.05
 2.01 Sngl -  27015  26722  294  0  0   53   37   204 0.910   7.50
 2.00 Prom -  40437  40398   40                              -5.46

 3.08 PlyA -  41128  41123    6                               1.05
 3.07 Term -  47944  47874   71  2  2   50   36   145 0.983   3.60
 3.06 Intr -  50423  50369   55  2  1   18   96   136 0.719   5.95
 3.05 Intr -  53978  53791  188  0  2   48   68   355 0.984  28.91
 3.04 Intr -  56420  56255  166  2  1   58   51   143 0.983   7.13
 3.03 Intr -  57876  57754  123  0  0   25  119    40 0.749   1.58
 3.02 Intr -  59109  58960  150  0  0   92  106    76 0.999  10.16
 3.01 Init -  62969  62916   54  2  0   93   78    79 0.952   8.68
 3.00 Prom -  78501  78462   40                              -4.36

 4.00 Prom +  84921  84960   40                              -4.26
 4.01 Init +  85312  85366   55  0  1   53   61    99 0.932   3.22
 4.02 Intr +  88642  88821  180  2  0   57   98   182 0.867  15.94
 4.03 Intr +  89341  89483  143  2  2   99   66    25 0.998   1.47
 4.04 Intr +  89708  89803   96  1  0  114   78    46 0.988   6.41
 4.05 Intr +  89987  90053   67  1  1  146  105     1 0.979   6.08
 4.06 Intr +  90225  90382  158  1  2   36  111   111 0.966   7.93
 4.07 Intr +  90482  90602  121  1  1   96   55    86 0.987   6.17
 4.08 Intr +  90842  90862   21  0  0  101  115    17 0.802   3.22
 4.09 Term +  92168  92196   29  0  2  103   43    23 0.294  -2.46
 4.10 PlyA +  92241  92246    6                              -1.75

 5.08 PlyA -  92605  92600    6                               1.05
 5.07 Term -  93377  93313   65  0  2  116   55    92 0.992   6.75
 5.06 Intr -  93839  93716  124  2  1  101   47   118 0.995   9.16
 5.05 Intr -  94385  94258  128  0  2   97  105    50 0.996   8.00
 5.04 Intr -  94661  94539  123  0  0   83  110    44 0.985   6.66
 5.03 Intr -  94972  94899   74  0  2  100   89    37 0.999   4.05
 5.02 Intr -  95310  95140  171  2  0   99   60   206 0.999  17.96
 5.01 Init -  95993  95881  113  2  2  100   96   155 0.954  15.39
 5.00 Prom -  98476  98437   40                             -10.74

 6.00 Prom +  98860  98899   40                              -4.36
 6.01 Init + 100001 100046   46  1  1   69  106    72 0.964   6.29
 6.02 Intr + 101270 101353   84  0  0  128  101    57 0.995  10.79
 6.03 Intr + 106901 106924   24  0  0   97  116    -2 0.166   1.50
 6.04 Intr + 110521 110816  296  2  2  114  116    68 0.532   8.93
 6.05 Intr + 110988 111063   76  2  1   83   74    51 0.991   2.29
 6.06 Intr + 111609 111687   79  1  1  131   98    52 0.995   9.11
 6.07 Intr + 111780 111891  112  0  1   52  116    21 0.788   1.68
 6.08 Term + 113613 114137  525  2  0  104   41   101 0.614   1.26
 6.09 PlyA + 118521 118526    6                               1.05

 7.00 Prom + 118546 118585   40                              -7.76
 7.01 Init + 121550 121632   83  1  2   65   93    98 0.736   8.44
 7.02 Term + 135231 135411  181  0  1   91   54   228 0.975  16.78
 7.03 PlyA + 135507 135512    6                               1.05

 8.00 Prom + 139403 139442   40                              -8.36
 8.01 Init + 152126 152270  145  1  1   65   96   132 0.997  11.98
 8.02 Intr + 152934 153064  131  1  2   90  100    84 0.989  10.21
 8.03 Intr + 155503 155649  147  0  0   74   92   141 0.975  13.53
 8.04 Intr + 160162 160382  221  0  2  116   86   252 0.995  24.90
 8.05 Intr + 162118 162424  307  1  1   73   65   297 0.994  22.35
 8.06 Intr + 165343 165509  167  0  2   81   65   158 0.858  11.56
 8.07 Intr + 167581 167660   80  1  2   46   95    29 0.981  -1.41
 8.08 Intr + 170492 170635  144  0  0   47   52    77 0.535   0.25
 8.09 Intr + 171345 171444  100  1  1   99  100    56 0.989   7.07
 8.10 Intr + 171617 171730  114  2  0   76   82    47 0.845   2.46
 8.11 Intr + 173201 173319  119  2  2   64   84   168 0.999  14.11
 8.12 Intr + 173591 173674   84  0  0   98   23    97 0.838   3.99
 8.13 Intr + 176340 176401   62  1  2   47   92    63 0.905   1.05
 8.14 Term + 180016 180162  147  0  0   82   53   113 0.957   5.10
 8.15 PlyA + 183244 183249    6                               1.05

 9.03 PlyA - 183741 183736    6                               1.05
 9.02 Term - 190955 190849  107  0  2   32   52    86 0.414  -2.03
 9.01 Intr - 192119 191798  322  2  1   70   47   291 0.184  18.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 148761 148649  113  1  2   45   47   164 0.813   6.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_1|98_aa
MSDPNCLDSGQTSQGHMLLWRTEKGEQTPIMTPNSKRTEVKLKVIELYNRQALISRPLEW
KSVLATVTVNTECQLDWIEGRKVLILAGINVGIKVSSY

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_1|297_bp
atgtctgaccccaactgcctggattcaggccagacttcacagggtcacatgttgctctgg
agaaccgagaagggtgagcagacaccaatcatgaccccaaacagcaagaggacagaagtg
aaattgaaagtcatagagctctacaatcgtcaagctcttattagcagaccgttggaatgg
aaatctgttttagctactgtaacggttaatactgagtgtcaacttgattggattgaagga
cgcaaagtattgatcctggctggcatcaatgtgggcatcaaggtgtcctcctactaa

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_2|97_aa
MDDFEEFKTSVEEGTADVVEIARGLDLEVELEDESELPQSHDKTLTDVELLLMDKQRKRF
LEMESTCEDSVNIVEMTTKDLKYYNNLVVKAVAGFED

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_2|294_bp
atggatgactttgaggagtttaagacatcagtggaggaaggaactgcagatgtggtagaa
atagcaaggggactagatttagaagtggagcttgaagatgaatctgaattgcctcaatct
catgataaaactttaacagatgtggagttgcttcttatggataagcaaagaaagagattt
cttgagatggaatctacttgtgaagattctgtgaacatagtggaaatgacaacaaaggat
ttaaaatattacaacaacttagttgttaaagcagtggcagggtttgaggattga

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_3|268_aa
MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL
PSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDL
FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP
PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDDYVEEGE
EEEEEEEGGLRGEKRKRDAEDDGEEEDD

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_3|807_bp
atggagatgaagaagaagattaacctggagttaaggaacagatccccggaggaggtgaca
gagttagtccttgataattgcctgtgtgtcaatggggaaattgaaggcctgaatgatact
ttcaaagaactagaatttctgagtatggctaatgtggaactaagttcgctggcccggctt
cccagcttaaataaacttcgaaaattggagcttagtgataatataatttctggaggcttg
gaagtcctggcagagaaatgtccaaatcttacctacctcaatctgagtggaaacaaaata
aaagatctcagtacagtagaagctctgcaaaatcttaaaaatttgaaaagtcttgacctg
tttaactgtgagatcacaaacctggaagattatagagaaagtatttttgaactactgcag
caaatcacatacttagatggatttgatcaggaggataatgaagcgccggactctgaagag
gaggatgatgaggatggcgatgaagatgatgaagaggaagaggaaaatgaagctggtcca
ccggaaggatatgaggaagaggaggaggaagaggaagaggaggatgaggatgaggatgaa
gatgaagatgaagcaggttcagagttgggagagggagaagaggaagtgggcctctcatac
ttaatgaaagaagaaattcaggatgaagaagatgatgatgactatgttgaagaaggggaa
gaagaggaagaagaggaagaaggaggtcttcgaggggagaagaggaaacgagatgctgaa
gacgatggagaggaagaagatgactag

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_4|289_aa
MLFSALLLEVIWILAADGGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPH
GYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINS
EATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHK
DQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGT
LFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTDILRDLSLG

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_4|870_bp
atgttgttctccgccctcctgctggaggtgatttggatcctggctgcagatgggggccca
catggtcaggaccattggccagcctcttaccctgagtgtggaaacaatgcccagtcgccc
atcgatattcagacagacagtgtgacatttgaccctgatttgcctgctctgcagccccac
ggatatgaccagcctggcaccgagcctttggacctgcacaacaatggccacacagtgcaa
ctctctctgccctctaccctgtatctgggtggacttccccgaaaatatgtagctgcccag
ctccacctgcactggggtcagaaaggatccccaggggggtcagaacaccagatcaacagt
gaagccacatttgcagagctccacattgtacattatgactctgattcctatgacagcttg
agtgaggctgctgagaggcctcagggcctggctgtcctgggcatcctaattgaggtgggt
gagactaagaatatagcttatgaacacattctgagtcacttgcatgaagtcaggcataaa
gatcagaagacctcagtgcctcccttcaacctaagagagctgctccccaaacagctgggg
cagtacttccgctacaatggctcgctcacaactcccccttgctaccagagtgtgctctgg
acagttttttatagaaggtcccagatttcaatggaacagctggaaaagcttcaggggaca
ttgttctccacagaagaggagccctctaagcttctggtacagaactaccgagcccttcag
cctctcaatcagcgcatggtctttgcttctttcatccaagcaggatcctcgtataccaca
gatatactgcgggatctctccttaggataa

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_5|265_aa
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT
DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYV
SGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFD
ACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQ
RSLLCRRQEDSRVMVYSALRIPPED

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_5|798_bp
atgggggctgcggtgtttttcggctgcactttcgtcgcgttcggcccggccttcgcgctt
ttcttgatcactgtggctggggacccgcttcgcgttatcatcctggtcgcaggggcattt
ttctggctggtctccctgctcctggcctctgtggtctggttcatcttggtccatgtgacc
gaccggtcagatgcccggctccagtacggcctcctgatttttggtgctgctgtctctgtc
cttctacaggaggtgttccgctttgcctactacaagctgcttaagaaggcagatgagggg
ttagcatcgctgagtgaggacggaagatcacccatctccatccgccagatggcctatgtt
tctggtctctccttcggtatcatcagtggtgtcttctctgttatcaatattttggctgat
gcacttgggccaggtgtggttgggatccatggagactcaccctattacttcctgacttca
gcctttctgacagcagccattatcctgctccataccttttggggagttgtgttctttgat
gcctgtgagaggagacggtactgggctttgggcctggtggttgggagtcacctactgaca
tcgggactgacattcctgaacccctggtatgaggccagcctgctgcccatctatgcagtc
actgtttccatggggctctgggccttcatcacagctggagggtccctccgaagtattcag
cgcagcctcttgtgccgacggcaggaggacagtcgggtgatggtgtattctgccctgcgc
atcccacccgaggactga

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_6|413_aa
MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYGGDVFHVEVNSDFGFPS
DSEREDKGAHGPRPDTVGQRGGSRPSPGPIRCRHRSKVSGNQHTPSHPKQRGSASPMAGS
GAKRSRDGELETSLNTQGCTTEGDLLFAQKCKELQGFIPPLTDLLNGLKMGRFERGLSSF
QQSVAMDRIQRIVGVLQKPQMGERYLGTLLQVEGMLKTWFPQIAAQKSSLGGGKHQLTKH
FPSHHSDSAASSPASPMEKMDQTQLGHLALKPKQPWHLTQWPAMNLTWIHTTPICNPPLS
SPGTISFSHGPLGTGTGIGVILFLQHGVQPFTHSAPTTPVPPTTASPVIPGEPMKLSGEG
PRCYSLPVTLPSDWSYTLSPPSLPTLARKMTIGHREQQRSHPPVAADAHLLNL

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_6|1242_bp
atggatgtcctctttgtagccatctttgctgtgccacttatcctgggacaagaatatgag
gatgaagaaagactgggagaggatgaatattatcaggtggtctattattatacagtcacc
cccagttatggtggggatgtatttcatgtagaagtgaacagtgactttggcttcccctct
gatagtgagagggaggacaagggggcccatgggcccaggccagacactgttgggcagagg
ggaggttcacggcccagcccgggtcctatccgctgcaggcatcgatcgaaggtttccggt
aaccagcatacaccatctcatccgaaacagcggggttcggcttctcctatggcaggatct
ggggcgaaaagatcaagagatggtgaactggagaccagtctaaacacccaaggttgtacc
acagagggagacctgctgtttgcccagaagtgtaaagaactccaaggatttatacctcct
ctcacagacctactcaatgggctgaagatgggtcgttttgagagaggattaagcagtttt
cagcagagtgtggcaatggacaggatccagcgtattgtaggtgttttgcagaagccacag
atgggggaacgttacctaggaaccttgctacaggtagaagggatgttaaagacttggttt
ccacaaatagctgcccagaagtcatcattgggtggtggcaagcatcagctgaccaagcat
tttccaagccaccacagtgattcagctgcttcctctcctgcatctcctatggaaaagatg
gaccagacacagctaggacatctagctttaaaaccaaagcagccttggcacctcacacaa
tggccagctatgaacctcacctggatccacaccactccaatttgcaacccccctctcagc
tccccaggtactatctcctttagccatggtcctttaggcactggaaccggcattggcgtc
attcttttcctccagcatggagtgcaacccttcacccactctgccccaaccaccccagtc
ccacctactacagcatctcctgtcatccctggtgagcctatgaaactatctggagagggt
cctcgttgctacagtttgccagtaactctgccatcagactggagctataccctatcccct
cccagtctacccaccttggccagaaagatgaccataggacaccgggagcagcagagaagc
catcctccagttgctgctgatgctcatcttctcaacctctag

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_7|87_aa
MAKHLKFIARTVMVQEGNVESAYRTLNRILTMDGLIEDIKHRRYYEKPCCRRQRESYERC
RRIYNMEMARKINFLMRKNRADPWQGC

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_7|264_bp
atggcaaaacatctgaagttcatcgccaggactgtgatggtacaggaagggaacgtggaa
agcgcatacaggaccctaaacagaatcctcactatggatgggctcattgaggacattaag
catcggcggtattatgagaagccatgctgccggcgacagagggaaagctatgaaaggtgc
cggcggatctacaacatggaaatggctcgcaagatcaacttcttgatgcgaaagaatcgg
gcagatccgtggcagggctgctga

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_8|655_aa
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAE
LQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDAT
GKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFK
FHDKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIE
WWDSYIIPNGFDLTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKL
RRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ
KAHEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQLY
LTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTN
KCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_8|1968_bp
atggcactgtcaaagagggagctggatgagctgaaaccatggatagagaagacagtgaag
agggtcctgggtttctcagagcctacggtggtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagccgatcatctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctaggcattccaag
tctagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgactctgag
atctctaaagaatcatcaggagtaaagaagcgacgaataccccgttttgaggaggtggaa
gaagagccagaggtgatccctgggcctccatcagagagccctggcatgctgactaagctc
cagccaaagactccttcttcctcccaaccagaacgacttcctattggcaacactattcag
ccctcccaggctgccactttcatgaatgatgccattgagaaggcaaggaaagcagctgaa
ctgcaagctcgaatccaagcccagctggcactgaagccaggactcatcggcaatgccaac
atggtgggcctggctaatctccatgccatgggcattgctcccccgaaggtggagttaaaa
gaccaaacgaaacctacaccactgatcctggatgagcaagggcgcactgtagatgcaaca
ggcaaggagattgagctgacacaccgcatgcctactctgaaagccaatattcgtgctgtg
aagagggaacaattcaagcaacaactaaaggaaaagccatcagaagacatggaatccaat
accttttttgacccccgagtctccattgccccttcccagcgccagagacgcacttttaaa
ttccatgacaagggcaaatttgagaagattgctcagcgattacggacaaaggctcaactg
gagaagctacaggcagagatttcacaagcagctcgaaaaacaggcatccatacttcgact
aggcttgccctcattgctcctaagaaggagctaaaggaaggagatattcctgaaattgag
tggtgggactcttacataatccccaatggctttgatcttacagaggaaaatcccaagaga
gaagattattttggaatcacaaatcttgttgaacatccagcccagctcaatcctccagtt
gacaatgacacaccagttactctgggagtatatcttaccaagaaggaacagaaaaaactt
cggagacaaacaaggagggaagcacagaaggaactacaagaaaaagtcaggctgggcctg
atgcctcctccagaacccaaagtgagaatttctaatttgatgcgagtattaggaacagaa
gctgttcaagaccccacgaaggtagaagcccacgtcagagctcagatggcaaaaagacag
aaagcgcatgaagaggccaacgctgcccgaaaactcacagcagaacagagaaaggtcaag
aaaattaaaaagcttaaagaagacatttcacagggggtacacatatctgtatatagagtt
cgaaatttgagcaacccagccaagaagttcaagattgaagccaatgctgggcaactgtac
ctgacaggggtggtggtactgcacaaggatgtcaacgtggtagtagtggaagggggcccc
aaggcccagaagaaatttaagcgtcttatgctgcatcggataaagtgggatgaacagaca
tctaacacaaagggagatgatgatgaggagtctgatgaggaagctgtgaagaaaaccaac
aaatgtgtactagtctgggagggtacagccaaagaccggagctttggagagatgaagttt
aaacagtgtcctacagagaacatggctcgtgagcatttcaaaaagcatggggctgaacac
tactgggaccttgcgctgagtgaatctgtgttagagtccactgattga

>gi568815597f:150172818_150379735|GENSCAN_predicted_peptide_9|142_aa
SPPTLTSPEPLHPMIDDSTVVFFVLYTPRRQALNGLHGVGYRLEFSIQRGLQSPCRRGRR
GGGLTAASAAAGRHLPGLHKRCCSSGGGGGGGGGSGQNNHCECVKAVGGCSHRPQLLGGA
TRDKMAGSHLAAPQKMRMRQIQ

>gi568815597f:150172818_150379735|GENSCAN_predicted_CDS_9|429_bp
tcacccccaacactcacatctccggagccacttcatccaatgatagacgatagtactgtg
gtgttttttgttctctatacaccaagacgacaagccttgaatggactccatggtgttggt
taccgactggaattttcgatccaacgaggactccagagcccctgccgaagaggccgacga
ggaggaggccttactgctgcctccgccgccgccggccgccatcttcccggtttgcacaag
cgctgctgctcctctggcggcggcggcggcggcggcggcgggagcgggcaaaacaatcac
tgcgagtgcgtgaaagccgtagggggctgcagccatcgcccccaactcctcggaggagca
acgcgcgacaaaatggctggcagccatcttgcggcaccacaaaagatgcgcatgcgccag
atccagtga