GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:10:00

Sequence gi568815586f:4231280_4452688 : 221409 bp : 44.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5464   5470    7  0  1  110   59     2 0.094   0.55
 1.02 Term +  22485  22549   65  1  2  102   44    79 0.564   2.95
 1.03 PlyA +  25866  25871    6                               1.05

 2.00 Prom +  31812  31851   40                              -0.86
 2.01 Init +  37918  37970   53  0  2   85    5   118 0.565   1.83
 2.02 Intr +  41013  41095   83  0  2  119   85     4 0.783   2.48
 2.03 Intr +  41567  41726  160  0  1   73  -63   176 0.701   0.05
 2.04 Intr +  41870  41974  105  2  0   80   59    83 0.770   3.93
 2.05 Intr +  42722  42956  235  2  1   37   92   457 0.839  38.69
 2.06 Intr +  44726  44941  216  1  0   98   55   222 0.999  18.60
 2.07 Intr +  47481  47640  160  2  1  111  111   289 0.999  33.06
 2.08 Intr +  48464  48545   82  0  1   82   66    25 0.534  -1.60
 2.09 Intr +  52932  53044  113  0  2   50   93    65 0.317   3.22
 2.10 Intr +  57563  57711  149  0  2  137   66   187 0.864  21.35
 2.11 Intr +  58952  59170  219  1  0   50   76    81 0.639   1.60
 2.12 Term +  68581  68730  150  0  0   81   55   278 0.909  21.71
 2.13 PlyA +  68907  68912    6                               1.05

 3.03 PlyA -  69377  69372    6                               1.05
 3.02 Term -  93474  93093  382  2  1   28   40   838 0.981  67.31
 3.01 Init -  96624  96620    5  0  2   76   55     0 0.203  -5.03
 3.00 Prom - 100714 100675   40                              -1.06

 4.00 Prom + 105481 105520   40                              -4.66
 4.01 Init + 112367 113032  666  1  0   66   41   305 0.111  18.83
 4.02 Term + 113741 114673  933  1  0   12   47   280 0.120   8.43
 4.03 PlyA + 114721 114726    6                              -0.45

 5.00 Prom + 115004 115043   40                              -3.26
 5.01 Init + 118543 118617   75  0  0   71   96    52 0.619   5.39
 5.02 Intr + 119988 120098  111  2  0   40   91   105 0.814   6.58
 5.03 Intr + 120981 121184  204  2  0  133   62    22 0.809   3.50
 5.04 Term + 123159 123176   18  2  0   99   47    -9 0.101  -5.58
 5.05 PlyA + 123280 123285    6                               1.05

 6.03 PlyA - 123310 123305    6                               1.05
 6.02 Term - 124594 124468  127  0  1  112   47   114 0.981   7.46
 6.01 Init - 136388 136327   62  2  2   61  113    30 0.287   3.52
 6.00 Prom - 136612 136573   40                              -7.06

 7.06 PlyA - 137120 137115    6                               1.05
 7.05 Term - 139504 139064  441  1  0  109   46   584 0.998  51.56
 7.04 Intr - 141418 141315  104  2  2  121   70    36 0.945   4.99
 7.03 Intr - 148259 148093  167  1  2   81   79   122 0.029  10.20
 7.02 Intr - 160640 160520  121  0  1   79   52    59 0.081   0.95
 7.01 Init - 193951 193870   82  1  1   89   98    43 0.506   4.68
 7.00 Prom - 196759 196720   40                              -4.86

 8.09 PlyA - 196898 196893    6                               1.05
 8.08 Term - 197674 197520  155  2  2  134   44    49 0.858   3.18
 8.07 Intr - 198109 197929  181  1  1   92   42    48 0.782   0.04
 8.06 Intr - 203112 202999  114  0  0  102   70   173 0.738  17.54
 8.05 Intr - 212957 212854  104  0  2   87  113    52 0.955   7.49
 8.04 Intr - 213483 213439   45  1  0  108   49    39 0.562   0.38
 8.03 Intr - 214206 213946  261  1  0   94   79   311 0.611  28.26
 8.02 Intr - 217294 217184  111  2  0   72   47    87 0.750   3.35
 8.01 Intr - 220308 220168  141  1  0   59  110    95 0.965   9.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_1|23_aa
MPDCKAVEDGDLKMLILFLGPLN

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_1|72_bp
atgcctgactgtaaggctgttgaagatggagacctcaagatgctcattctctttcttgga
ccacttaattga

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_2|574_aa
MARGGGRGGRRVAALAPGEPSVRLTQPAPHPALLALRAPARAPSLESCIGVATLSADTSG
GLSADAGARKRVFPAWPLAAGEPLGALPPACGGPRRCTAGGQKGRCSGPFNRGFRNSFEV
IRNTDFRDMTFISGPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNLLTI
EERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPT
PKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAA
VTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATVAMAETLEPYSSKGEMSGVHVLT
IRNLRHCAFTRIILSESSEQHYNVGIAVVIICRSENENSERSDFKFAMYPPSMIATGSVG
AAICGLQQDEEVSSLTCDALTELLAKITNTDVLREMAQGDADGANPGSSSEIVRRYGFKM
RAPNIRFLNEDSRTQTENLPPVQHEECFSNPPEENRGRDLTFIEMDCLKACQEQIEAVLL
NSLQQYRQDQRDGSKSEDELDQASTPTDVRDIDL

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_2|1725_bp
atggcgaggggcggggggcggggagggaggcgggtcgcggcgctggctccgggggaacct
agtgtacggctcacccagcccgcgccccaccccgccttgctggctctccgcgcccctgcc
cgggccccctctctcgaaagctgcatcggtgtggccacgctcagcgcagacacctcgggc
ggcttgtcagcagatgcaggggcgaggaagcgggtttttcctgcgtggccgctggccgcg
ggggaaccgctgggagccctgcccccggcctgcggcggccctagacgctgcaccgcgggg
gggcagaagggacgttgttctggtccctttaatcggggctttcgaaacagcttcgaagtt
atcaggaacacagacttcagggacatgacctttatctctgggccggggaaagcaggaggg
agaggggccgccgggctggccatggagctgctgtgccacgaggtggacccggtccgcagg
gccgtgcgggaccgcaacctgctccgagacgaccgcgtcctgcagaacctgctcaccatc
gaggagcgctaccttccgcagtgctcctacttcaagtgcgtgcagaaggacatccaaccc
tacatgcgcagaatggtggccacctggatgctggaggtctgtgaggaacagaagtgcgaa
gaagaggtcttccctctggccatgaattacctggaccgtttcttggctggggtcccgact
ccgaagtcccatctgcaactcctgggtgctgtctgcatgttcctggcctccaaactcaaa
gagaccagcccgctgaccgcggagaagctgtgcatttacaccgacaactccatcaagcct
caggagctgctggagtgggaactggtggtgctggggaagttgaagtggaacctggcagct
gtcactcctcatgacttcattgagcacatcttgcgcaagctgccccagcagcgggagaag
ctgtctctgatccgcaagcatgctcagaccttcattgctctgtgtgccaccgtggccatg
gcagagaccctggaaccttactcatccaagggagagatgtcaggagttcatgttttgaca
atcagaaaccttaggcactgtgcttttacaaggattattttaagtgaatcctcagaacag
cactacaacgtgggtattgctgttgtcattatttgcagatcagaaaatgaaaactcagag
aggtcagactttaagtttgccatgtacccaccgtcgatgatcgcaactggaagtgtggga
gcagccatctgtgggctccagcaggatgaggaagtgagctcgctcacttgtgatgccctg
actgagctgctggctaagatcaccaacacagacgtgctcagagaaatggcgcagggagat
gctgacggagcaaatccggggtcctcctctgagatagttcgtagatatggttttaaaatg
cgggctccaaacatacgctttttaaacgaggactccagaacacagactgaaaacctccct
ccagtgcagcatgaagaatgcttttctaatcctccagaggaaaatcgtggacgggactta
acgtttatagaaatggattgtctcaaagcttgccaggagcagattgaggcggtgctcctc
aatagcctgcagcagtaccgtcaggaccaacgtgacggatccaagtcggaggatgaactg
gaccaagccagcacccctacagacgtgcgggatatcgacctgtga

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_3|128_aa
MRLGPAAGRDVSCEQLTQLYSACQRPQVNPGLRRKQNSLLKRLRKAKKEAPPMEKPEVVK
THLRDMIILPKMVGSMVGVYNGKTFNQVEIKPEMISHYLGEFSITYKLVKHCRPGIGATH
SSRFIPLK

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_3|387_bp
atgagacttggaccagctgcgggacgggacgtgtcctgcgagcagctgacgcagctgtac
agtgcgtgccagcggccgcaagtgaacccgggcctgcggcggaaacagaactcgctgctg
aagcgcctgcgcaaggccaagaaggaggcaccgcccatggagaagccggaagtggtgaag
acgcacctgcgggacatgatcatcctgcccaagatggtgggcagcatggtgggcgtctac
aacggcaagaccttcaaccaggtggagatcaagccggagatgatcagtcactacctgggc
gagttctccatcacctataagctggtgaagcactgccggcccggcatcggggccacccac
tcctcccgcttcatccccctcaagtag

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_4|532_aa
MKAEIKMFFETNENKETTYQNLWDTFKAVCRGKFIALNAHRRKQERSKVGTLTSQLKELE
KQEQTNSKASRRQEITKIRAELEETETQKTLPKINESRSWFFEKINKIDRPLARPIKKRE
KNQMEAIKNDKGDITTDPTEIRTTIREYYKHLYTNKLESLEEMDKFLDTYTLPRLKQEEV
ESLIRPVTGSEIEAIINSLPTKKSPGPDGFTAEFFQRYKEELRIKYLGIQLTRDMKDLFK
EHYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMAILPKVIYRFNAIPFELPMTFFTDLEK
TTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLCYKATVTKTAWYWYQNRDIDQWNRT
EPSEIIPHIYNYLNFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSR
WSKDLHVRPKTIKTLEENLGNTIQDIGMGKDFMTKTPKAMATKAKVDEWDLIKLKSFCTA
KETTIRVNRQPTEWEKIFPIYSSDKGLISRIYKELKQICKKKTTPSTSGQRI

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_4|1599_bp
atgaaggcagaaataaagatgttctttgaaaccaatgagaacaaagagacaacataccag
aatctctgggacacatttaaagcagtgtgtagagggaaatttatagcactaaatgctcac
aggagaaagcaggaaagatctaaagttggcaccctaacatcacaattgaaagaactagag
aagcaagagcaaacaaattcaaaagctagcagaaggcaagaaataactaagatcagagca
gaactggaggagacagagacacaaaaaacccttccaaaaatcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagaccgctagcaagaccaataaagaaaagagag
aagaatcaaatggaagcaataaaaaatgataaaggggatatcaccacagatcccacagaa
atacgaactaccatcagagaatactataaacacctctacacaaataaactagaaagtcta
gaagaaatggataaattcctcgacacctacaccctcccaagactaaaacaggaagaagtt
gaatctctgattagaccagtaacaggctctgaaattgaggcaataattaatagcttacca
accaaaaaaagtccaggaccagacggattcacagccgaattcttccagaggtacaaggag
gagctgaggataaaatacctaggaatccaacttacaagggatatgaaggacctcttcaag
gagcactataaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaacatt
ccatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggtaatt
tatagattcaatgccatccccttcgagctaccaatgactttcttcacagacttggaaaaa
actactttaaagttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagc
caaaagaacaaagctggaggcatcacgctacctgacttcaaactatgctacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaaca
gagccctcagaaataataccacacatctacaactatctgaactttgacaaacctgacaaa
aacaagaaatggggaaaggattccctattcaacaaatggtgctgggaaaactggctagcc
atatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaaga
tggagtaaagacttacatgttagacctaaaaccataaaaaccctagaagaaaacctaggc
aataccattcaggacataggcatgggcaaggacttcatgactaaaacaccaaaagcaatg
gcaacaaaagccaaagttgacgaatgggatctaattaaactaaagagcttctgcacagca
aaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttccaatc
tactcatctgacaaagggcttatatccagaatctacaaagaactcaaacaaatttgcaag
aaaaaaacaaccccatcaacaagtgggcaaaggatatga

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_5|135_aa
MHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAMAKAAREECPVFTPPGGETL
DQVKMRGIDFFEFLCQLILKEADQKEQFSQGSPSNCLETSLAEIFPLGKNHSSKVNSDSG
IPGLAASVLVRQPLQ

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_5|408_bp
atgcatggaattttggagagaagcaaattttgcaaagatatgacggtaaagtatgactca
agacttcgggaaaggaaatacggggttgtagaaggcaaagcgctaagtgagctgagggcc
atggccaaagcagccagggaagagtgccctgtgtttacaccgcccggaggagagacgctg
gaccaggtgaaaatgcgtggaatagacttttttgaatttctttgtcaactaatcctgaaa
gaagcggatcaaaaagaacagttttcccaaggatctccaagcaactgtctggaaacttct
ttggcagagatatttcctttaggaaaaaatcacagctctaaagttaattcagacagcggt
attccaggattagcagccagtgtcttagttaggcagccactgcagtga

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_6|62_aa
MSIHYRSFAKDWVAHARGKIRAADLTSFSADTIESSLPILDKAAFLPPVSIPLTLTYFAQ
QH

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_6|189_bp
atgagcattcactacaggtccttcgccaaagactgggtagcacatgcacgaggtaagata
cgagcagcagatcttacatccttcagtgctgacaccatcgagtcctccctgcccatcctg
gataaagcagcattcctcccaccagtctccatcccccttactctgacctattttgctcaa
cagcactga

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_7|304_aa
MPGRKEVHVCGPSAVAHACKLSTLADQVPALGPPRAHPGGFSPEDTFLETGTFIEEGCGV
TDKDLNSDVCSMSVLRAYPNASPLLGSSWGGLIHLYTATARNSYHLQIHKNGHVDGAPHQ
TIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFGSHYFDPENCRFQHQTLENGYDVY
HSPQYHFLVSLGRAKRAFLPGMNPPPYSQFLSRRNEIPLIHFNTPIPRRHTRSAEDDSER
DPLNVLKPRARMTPAPASCSQELPSAEDNSPMASDPLGVVRGGRVNTHAGGTGPEGCRPF
AKFI

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_7|915_bp
atgcctggacggaaagaagtccacgtttgtgggccgagcgcggtggctcatgcctgtaaa
ctcagcactttggcagaccaagtccctgcccttggcccgccacgtgcccatcctggtggc
ttcagtcctgaagatacgttcttggaaacagggacattcatagaagagggctgtggggtc
actgacaaagatctgaattcagacgtctgcagcatgagcgtcctcagagcctatcccaat
gcctccccactgctcggctccagctggggtggcctgatccacctgtacacagccacagcc
aggaacagctaccacctgcagatccacaagaatggccatgtggatggcgcaccccatcag
accatctacagtgccctgatgatcagatcagaggatgctggctttgtggtgattacaggt
gtgatgagcagaagatacctctgcatggatttcagaggcaacatttttggatcacactat
ttcgacccggagaactgcaggttccaacaccagacgctggaaaacgggtacgacgtctac
cactctcctcagtatcacttcctggtcagtctgggccgggcgaagagagccttcctgcca
ggcatgaacccacccccgtactcccagttcctgtcccggaggaacgagatccccctaatt
cacttcaacacccccataccacggcggcacacccggagcgccgaggacgactcggagcgg
gaccccctgaacgtgctgaagccccgggcccggatgaccccggccccggcctcctgttca
caggagctcccgagcgccgaggacaacagcccgatggccagtgacccattaggggtggtc
aggggcggtcgagtgaacacgcacgctgggggaacgggcccggaaggctgccgccccttc
gccaagttcatctag

>gi568815586f:4231280_4452688|GENSCAN_predicted_peptide_8|370_aa
XGWPLFENNASSEIHGFKAFNSTTLIQTFHKLYCMAGTVLRSEDTETEHLRNLGCLLLHM
LAAITTYAVADGNEELEAHVSLPHRILVGMVVPSPAGTRANNTLLDSRGWGTLLSRSRAG
LAGEIAGVNWESGYLVGIKRQRRLYCNVGIGFHLQVLPDGRISGTHEENPYSSYPASCLQ
AASLLYGLLEISTVERGVVSLFGVRSALFVAMNSKGRLYATPSFQEECKFRETLLPNNYN
AYESDLYQGTYIALSKYGRNRWRMRLCPKQVLNLVHHADSQRRTMFVYLIERLKFRHQRA
VSCVVSSFCKSLSTSGWSQGRQAKRTRKHRFMVLLIIKAGRSPVAYSVQLPCSLPMGKLA
QEGEDSDGRL

>gi568815586f:4231280_4452688|GENSCAN_predicted_CDS_8|1113_bp
nagggctggcccttgtttgagaataacgcgtctagtgaaatccatggatttaaagccttt
aattcaacaacacttattcaaacatttcataaactgtattgcatggcgggcacggtgctc
cgttctgaagatacagagacagaacatttgaggaatctgggctgcctgcttctgcatatg
ttagcagccatcacaacatatgctgtggcggatggcaatgaagaactggaagcccacgtg
tctctcccacaccgcatcctagtgggcatggtggtgccctcgcctgcaggcacccgtgcc
aacaacacgctgctggactcgaggggctggggcaccctgctgtccaggtctcgcgccggg
ctagctggagagattgccggggtgaactgggaaagtggctatttggtggggatcaagcgg
cagcggaggctctactgcaacgtgggcatcggctttcacctccaggtgctccccgacggc
cggatcagcgggacccacgaggagaacccctacagttcttatcctgcaagctgcctgcaa
gctgccagcttgctgtatggcctgctggaaatttccactgtggagcgaggcgtggtgagt
ctctttggagtgagaagtgccctcttcgttgccatgaacagtaaaggaagattgtacgca
acgcccagcttccaagaagaatgcaagttcagagaaaccctcctgcccaacaattacaat
gcctacgagtcagacttgtaccaagggacctacattgccctgagcaaatacggacggaac
aggtggaggatgcgattatgccccaagcaggtcctgaatctggtccatcatgcagatagc
caacgcagaaccatgtttgtatacctcattgaacgactgaaattccggcaccagagagct
gtgtcctgcgtggtttcctctttctgtaaatcgctgagtacctcaggctggtcccaggga
aggcaggcaaagagaacccgaaagcaccgattcatggtgctcttgattattaaggcagga
agaagtcctgtggcgtactcagtccaactaccctgtagcttgccaatggggaaattggcc
caggagggtgaagacagcgatggaagactatag