GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:51:28

Sequence gi568815581f:30732348_30994910 : 262563 bp : 43.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -  52096  51980  117  2  0   98   38   114 0.827   7.84
 1.04 Intr -  53684  53572  113  1  2   81   95    62 0.955   6.22
 1.03 Intr -  65051  64964   88  0  1   69   98   108 0.540   8.93
 1.02 Intr -  71761  71554  208  1  1  100   81   170 0.983  16.15
 1.01 Init -  92292  92176  117  0  0   96   52   135 0.748  10.90
 1.00 Prom -  95433  95394   40                             -10.35

 2.00 Prom +  97170  97209   40                              -7.26
 2.01 Init +  98622  98753  132  2  0   37   63   236 0.531  16.14
 2.02 Intr + 101801 103701 1901  1  2   44   82   552 0.547  37.53
 2.03 Intr + 104859 104967  109  0  1   84   86    22 0.978   1.89
 2.04 Intr + 108270 108434  165  2  0   81  100    51 0.943   5.76
 2.05 Intr + 122821 122980  160  0  1    4  115   111 0.027   4.96
 2.06 Intr + 128083 128265  183  2  0   31   71   104 0.642   2.76
 2.07 Intr + 136901 137043  143  0  2   57   96   110 0.955   8.77
 2.08 Intr + 137149 137299  151  0  1   99  108   -30 0.642  -0.16
 2.09 Intr + 144027 144203  177  1  0   57  116    25 0.623   2.09
 2.10 Intr + 147076 147140   65  2  2   66  119    41 0.635   3.44
 2.11 Term + 160947 161807  861  2  0   67   41   161 0.106   2.03
 2.12 PlyA + 161839 161844    6                               1.05

 3.05 PlyA - 162389 162384    6                               1.05
 3.04 Term - 167259 166822  438  0  0   49   39   224 0.262   8.88
 3.03 Intr - 172090 171719  372  1  0  -12   71   178 0.124   1.36
 3.02 Intr - 174273 174128  146  1  2   89   62    92 0.775   6.70
 3.01 Init - 177825 177777   49  0  1   86   58    20 0.750  -2.09
 3.00 Prom - 178461 178422   40                              -3.76

 4.00 Prom + 189227 189266   40                              -4.66
 4.01 Init + 189668 189761   94  1  1   95  110   226 0.999  26.04
 4.02 Intr + 190593 190723  131  1  2  119   60   138 0.980  14.51
 4.03 Intr + 194480 194571   92  1  2   76   76   117 0.503   8.09
 4.04 Intr + 199542 199621   80  0  2   93  103    39 0.631   5.09
 4.05 Intr + 201838 201950  113  2  2   64  110    79 0.948   7.80
 4.06 Intr + 212560 212706  147  0  0  136  100   134 0.995  19.83
 4.07 Intr + 216940 217023   84  0  0   99   83    43 0.876   4.92
 4.08 Intr + 220941 221003   63  2  0   95   77    37 0.717   2.21
 4.09 Intr + 221856 221919   64  2  1   91   40    37 0.469  -2.51
 4.10 Intr + 222087 222208  122  1  2   58   99   103 0.677   8.61
 4.11 Intr + 223894 224122  229  0  1  139   46   288 0.757  27.14
 4.12 Term + 225438 225739  302  1  2  120   47    85 0.495   2.98
 4.13 PlyA + 226822 226827    6                               1.05

 5.00 Prom + 228841 228880   40                              -4.26
 5.01 Init + 238727 239098  372  1  0   91   53   405 0.919  32.26
 5.02 Intr + 252231 252413  183  2  0   22  102   218 0.504  16.58
 5.03 Intr + 255597 255759  163  2  1   30   84   122 0.553   5.55

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  63990  63813  178  2  1   58   95    69 0.815   4.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:30732348_30994910|GENSCAN_predicted_peptide_1|215_aa
MELEPELLLQEARENVEAAQSYRRELGHRLEGLREARRQIKESASQTRDVLKQHFNDLKG
TLGKLLDERLVTLLQEVDTIEQETIKPLDDCQKLIEHGVNTAEDLVREGEIAMLGGVGEE
NEKLWSFTKKASHIQLDRVETVGQPDRRDSIGVCAEKQDGYDSLQRDQAVCISTNGAVFV
NGKEMTNQLPAVTSGSTVTFDIEAVTLGTTSNNEX

>gi568815581f:30732348_30994910|GENSCAN_predicted_CDS_1|645_bp
atggagctggagcctgagctgctgttgcaggaggcccgcgagaacgtggaggcagcgcag
agctaccggcgggagctgggtcaccggcttgaggggctgcgtgaggcgcggaggcagatc
aaagaaagtgcatcacagacaagggatgttctcaaacagcattttaatgatttaaaggga
acccttggaaagctcctggatgagcgattggtgacccttttgcaagaggtggacaccatt
gaacaggagaccattaaaccactagatgactgccagaagctcatagaacacggagtcaac
actgcagaggacttagtccgagaaggtgaaatcgccatgcttggtggtgtgggagaagag
aatgagaaactgtggagctttaccaaaaaggcctcgcacattcagttggacagagttgaa
actgtgggacagccagacagaagagatagcataggagtgtgtgcagaaaaacaggatgga
tatgactctctgcagcgggatcaagctgtgtgcattagtacaaatggtgcagtttttgtc
aatggaaaagaaatgacaaatcagttacccgcagttacttctgggtccactgtcacgttt
gacattgaagccgtgactctaggaaccaccagtaataatgaagnn

>gi568815581f:30732348_30994910|GENSCAN_predicted_peptide_2|1348_aa
MRLGKDFHTNKRVCEEIAIIPSKKPRNKIAGYVTHLIKRIQRGPPCKKRKKDDDTSTCKT
ITKYLSPLGKTRDRVFAPPKPSNILDYFRKTSPTNEKTQLGKECKIKSPESVPVDSNKDC
TTPLEMFSNVEFKKKRKRVNLSHQLNNIKTENEAPIEISSDDSKEDYSLNNDFVESSTSV
LRYKKQVEVLAENIQDTKSQPNTMTSLQNSKKVNPKQGTTKNDFKKLRKRKCRDVVDLSE
SLPLAEELNLLKKDGKDTKQMENTTSHANSRDNVTEAAQLNDSIITVSYEEFLKSHKENK
VEEIPDSTMSICVPSETVDEIVKSGYISESENSEISQQVRFKTVTVLAQVHPIPPKKTGK
IPRIFLKQKQFEMENSLSDPENEQTVQKRKSNVVIQEEELELAVLEAGSSEAVKPKCTLE
ERQQFMKAFRQPASDALKNGVKKSSDKQKDLNEKCLYEVGRDDNSKKIMENSGIQMVSKN
GNLQLHTDKGSFLKEKNKKLKKKNKKTLDTGAIPGKNREGNTQKKETTFFLKEKQYQNRM
SLRQRKTEFFKSSTLFNNESLVYEDIANDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSK
AESEASLLNVSTPKSTRRSGRISSTPTTETIRGIDSDDVQDNSQLKASTQKAANLSEKHS
LYTAELITVPFDSESPIRMKFTRISTPKKSKKKSNKRSEKSEATDGGFTSQIRKASNTSK
NISKAKQLIEKAKALHISRSKVTEEIAIPLRRSSRHQTLPERKKLSETEDCDVQCKAKRD
FLMSGLPDLLKRQIAKKAAALDVYNAVSTSFQRVVHVQQKDDAELEADVSHKETKRKLVE
AENSKSKRKKPNEYSKNLEKTNRKSEELSKRNNSSGIKLDSSKDFSGGIDFKGSSDDEEE
SRLCNTVLITGPTGVGKTAAVYACAQELGFKIFEVNASSQRSGRQILSQLKEATQSHQVD
KQGVNSQKPCFFNSYYIGKSPKKISSPKKVVTSPRKVPPPSPKSSGPKRALPPKTLANYF
KVSPKPKNNEEIGMLLENNKDPTFSLMFDGCFEEIKFSTPSLHKITMKEEWHKFIQLLTE
FQMRNVDFLYSNLEFILPLPVDTIPETKNFCGPSVTVDASAATKSMNCLARKHSEREQPL
KKSQKKKQKKTLVILDDSDLFDTDLDFPDQSISLSSVSSSSNAEESKTGDEESKARDKGN
NPETKKSIPCPPKTTAGKKCSALVSHCLNSLSEFMDNMSFLDALLTDVREQNKYGRNDFS
WTNGKVTSGLCDEFSLESNDGWTSQSSGELKAAAEALSFTKCSSAISKALETLNSCKKLG
RDPTNDLTFYVSQKRNNVYFSQSAANLE

>gi568815581f:30732348_30994910|GENSCAN_predicted_CDS_2|4047_bp
atgcgcctgggcaaagacttccacacgaacaagcgcgtgtgcgaggaaatcgccattatt
cccagcaagaagccccgcaacaagatagcaggctatgtcacgcatctgataaagcggatt
cagagggggccaccatgcaaaaagcgaaagaaagatgatgacacatctacctgcaaaaca
attacaaaatatttatcaccactagggaagactagagacagggtttttgctccaccaaaa
cctagtaatattctggattattttagaaagacttcacccacaaatgagaagacacaatta
gggaaagagtgcaagataaagtcacctgaatcagtacctgttgacagcaacaaagactgt
acgacacctttggaaatgttctcaaatgtagagtttaagaagaaaagaaagagggttaat
ttatctcatcaactaaataatattaaaactgaaaatgaagctccaattgaaattagtagc
gacgatagcaaagaagactatagtttaaataatgattttgtggaaagtagtacttctgtt
ttacgttacaagaaacaagtagaggtacttgcagaaaacattcaagatacaaaaagtcaa
ccaaatactatgacctccctgcaaaattctaaaaaagtaaatcctaaacaagggaccaca
aaaaatgacttcaaaaagttgagaaaaaggaaatgcagagatgtagtagatctatctgaa
agcttacccttggcagaggaactaaatttgcttaaaaaagatggtaaagatactaaacag
atggagaatactacaagccatgcaaactctagagataacgtaactgaagcagcccagtta
aatgatagtataataactgtctcatatgaggaatttttaaaaagtcacaaggaaaataaa
gtggaagagataccagactctacaatgtcaatttgtgttccttctgaaactgtcgacgaa
atagtcaaaagtggttatataagtgaatcagaaaactccgaaatttcccagcaggtacgc
tttaagacagttactgttcttgcacaggttcaccctattccgcccaaaaagacagggaaa
ataccccgaattttcttgaaacaaaagcaatttgaaatggaaaatagtttatctgatcct
gagaatgaacagacagttcagaaaagaaaatctaatgttgttatacaggaggaagaatta
gaattggctgttttggaagctggaagttctgaagctgtgaaaccaaaatgcactctagaa
gaaagacagcaatttatgaaagcatttaggcagccagcatcagatgcacttaaaaatgga
gttaaaaagtcttctgataagcagaaagaccttaatgaaaaatgtctatatgaagtagga
agagatgataattctaaaaaaatcatggaaaattctggtatccaaatggtttcaaaaaat
ggcaatttacagttacacactgataaaggaagttttctgaaggagaaaaataaaaagcta
aagaagaagaataagaaaacattagatactggggctattccaggcaaaaacagagaggga
aacactcaaaagaaagaaacaacctttttcttaaaagagaaacaatatcaaaatagaatg
agtttaagacaaaggaaaacagagtttttcaaaagcagcactttatttaacaatgaaagt
cttgtttatgaagatatagcaaatgatgaccttctaaaggtttcctctctgtgtaacaat
aataaattgtcaagaaaaaccagcataccagttaaagatattaagcttacacagtctaaa
gctgaatctgaagccagcttgctaaatgtttccacgcccaagtcaactagaagatctgga
agaattagcagcacacctactacagaaaccattagaggtattgattctgacgatgtacaa
gataatagtcaactaaaggcttccactcaaaaagcagccaacttatcggaaaagcacagc
ttatatacagcagaattaataacagtaccctttgattcagagagccctattagaatgaaa
ttcaccagaattagtactcccaaaaaatctaagaaaaaatctaacaaaagatctgagaaa
tctgaagcaactgatggaggttttacttctcagattagaaaggcaagcaatacttcaaaa
aacatatcaaaagcaaaacaattgattgaaaaagcaaaagctttacacatcagtaggtca
aaggtgactgaagaaatagcgatacccttaaggcgctcctctagacatcagacacttcct
gaaaggaagaaattgtcagaaacagaagattgtgatgttcaatgtaaagcaaagcgtgac
ttcctaatgagtggtttgccagatttgttgaaacggcaaattgcaaagaaagctgctgcg
ctggatgtgtacaatgcagtgagtaccagtttccagagagtcgtacatgtgcaacaaaag
gatgatgcagaactggaggctgatgtcagccataaagaaaccaaaaggaaactcgtagaa
gcagaaaattctaagtcaaaaagaaagaaaccaaatgagtattcaaaaaatctggagaag
accaataggaagtcagaagaacttagcaaaagaaacaactcttctgggataaagctagat
tcttccaaagatttctcgggtggcatagactttaaaggcagttcagatgatgaagaagag
agtcgtctttgcaatactgtccttataacagggccaacaggagtgggaaaaactgctgca
gtgtatgcttgtgcccaggagcttggatttaagatatttgaagtgaatgcctcttcccag
cgcagtggtagacaaattctatctcagttgaaggaagctactcagtcccatcaagtagac
aaacaaggtgtaaactcacaaaaaccctgtttttttaatagctactacataggcaagtca
ccaaaaaaaataagctcccctaagaaagttgttacatcaccaagaaaagttcctccacca
tcaccaaaaagtagtggaccaaagcgagcacttcctcccaaaaccttggcaaattatttt
aaagtatctcccaaacctaaaaataatgaagaaataggaatgcttctggaaaataataaa
gacccaacatttagtttaatgtttgatggctgctttgaagaaatcaagttcagtactcct
tccctgcacaaaatcacaatgaaggaagaatggcataaattcatccagcttcttacagaa
ttccaaatgcggaatgtagattttttatatagtaatcttgagtttattctaccattacca
gttgataccattccagaaactaaaaacttttgtggcccatcagtaactgtggatgccagt
gcagcaacaaaaagtatgaattgtcttgctaggaaacactctgaaagagaacagccattg
aaaaagtcccagaaaaagaaacaaaagaaaacattggtaatattagatgatagtgatcta
tttgacactgacttggactttcctgatcaatctattagcctgtcctctgtatcatcttcc
tcaaatgcagaagaaagcaaaaccggagacgaagaaagcaaagccagagacaaaggaaac
aatccagagacaaagaaatctattccttgtcctcctaaaacaactgcaggaaaaaaatgt
tctgcccttgtttctcattgtttaaattctctctctgagttcatggataacatgtccttc
ttagatgcacttttaactgatgtaagggaacaaaacaaatacggtagaaatgactttagt
tggacaaatggaaaggttacaagtggactttgtgatgagtttagtcttgagagtaatgat
ggatggacttctcaaagctctggagaattaaaggcagctgcagaagctctcagctttact
aaatgttcttctgctatttcaaaagcattggaaaccttgaattcttgcaagaaattagga
agagatccaaccaacgatcttactttttatgtttcacaaaagcgcaataatgtatacttt
agtcagtcagcagctaatttagagtaa

>gi568815581f:30732348_30994910|GENSCAN_predicted_peptide_3|334_aa
MGFHHVGQAGLELLTSGWAPTGAPQSKCLGETQGVSTKEALYPLQTKTGLGIAFLEIRPS
GSQESKITPNVTFCDENAKEPENALDKLFSSEQQASILHVLNTASTKELEAFRLLRGRRS
INIVEHRENFGPFQNLESLMNVPLFKYKSTVQVCNSILCPKTGREKRKSPENRFLRKLLK
PDIERERLKISSIISKMPKADFYVLEKTGLSIQNSSLFPILLHFHIMEAMLYALLNKTFA
QDGQHQVLSMNRNAVGKHFELMIGDSRTSGKELVKQFLFDSILKADPRVFFPSDKIVHYR
QMFLSTELQRVEELYDSLLQAIAFYELAVFDSQP

>gi568815581f:30732348_30994910|GENSCAN_predicted_CDS_3|1005_bp
atggggtttcaccatgttggccaagctggtctcgaacttctgacctcaggctgggcccca
acaggagctcctcaatctaagtgtctaggagaaacccagggagtctccacgaaggaggca
ctttacccactacagactaaaactggcctcggaatcgccttcctggagattcggcccagc
ggctctcaggagtcgaaaattactcccaatgttactttttgtgatgaaaatgcaaaggag
cccgaaaatgcacttgacaagctcttctcttcagaacagcaggcttccatcttgcatgtg
ttgaatacagcatctactaaagaacttgaagctttccgattgcttcgtggaagaaggtcc
atcaatatcgtagagcacagagaaaactttgggccatttcagaatttagagagtttaatg
aatgtgcccttgtttaagtataaaagtacagttcaagtttgtaactccatactttgtcca
aagactggacgggaaaaaagaaagtcaccggaaaaccggttcctgagaaagctcctcaaa
ccagacatagaaagagaaagacttaagatttcctcgatcatttcaaagatgcctaaagca
gatttctatgttctggaaaaaacaggactttccattcagaactcatctctgtttccaata
ctgttacattttcatatcatggaagccatgctgtatgccttattaaataaaacttttgcc
caggatgggcagcatcaggtgctgagcatgaatcgaaatgcagtggggaagcattttgaa
ctgatgattggtgactcccggactagtggaaaagagctagtgaagcagtttctcttcgat
tctatactgaaggcggatcctcgggtgttcttcccatcagataaaatagttcactacaga
cagatgtttttatctactgaactacaaagagtagaagagctttatgattcattattacaa
gctattgccttctatgaattagcagtgtttgactctcagccttag

>gi568815581f:30732348_30994910|GENSCAN_predicted_peptide_4|506_aa
MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR
VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR
EFMADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISI
KDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAF
PELPESELVPFLTRNYLKQGFMEKTGPKPEKEEGASSKLRQQGEAGKGYETDLVICGKKF
PLLQQKEPFKKRWFALDCHERRLLYYKNPLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGN
RWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGVLSSPLTPLNRLRQHWHGHLPQPSSF
PLQLHQQRVAAAAGDPLTEELAATEHLELLVGRSLHLGPGCPPSVPRSQQPFLAVNSART
EAVALSISSLGLPRNPPRGSEDLVHR

>gi568815581f:30732348_30994910|GENSCAN_predicted_CDS_4|1521_bp
atgggcgatcgcgagcgcaacaagaagcggctgctggagctgctgcgggcgccggacaca
ggcaacgcgcactgcgccgactgcggggcggcagatcccgactgggcctcttacaagctg
gggatcttcatctgtctcaactgctgcggcgtccaccgtaacttccctgacatcagcaga
gttaaatctgtgcgacttgacttctgggacgacagtattgtggagtttatgatccacaat
ggaaacctccgtgtgaaggccaagttcgaagccagagtcccagctttctactacatcccc
caggccaacgactgcctggtcttaaaggaacaatggattcgagctaagtatgagagacgg
gaatttatggctgatggggaaaccatctcgctcccaggtaaccgagaaggattcctgtgg
aagcgaggaagggacaactcacagtttctgagaaggaagtttgtacttctggcaagagaa
ggcctcctgaagtacttcacaaaggaacagggtaaaagccccaaagctgtcatcagcatt
aaggacttgaatgccaccttccagacagagaagatagggcacccccatgggctgcagatc
acctacaggagagatggccacaccaggaacctgtttgtgtatcatgaaagtgggaaggag
atagtggactggttcaatgccctccgtgcagcccgtctgcagtacctaaaaatggccttt
cctgaactcccagagtctgagctcgtgccattcctcaccaggaactacctcaaacaaggc
ttcatggaaaagactgggccaaagcctgaaaaagaggaaggtgcctcttccaagttgagg
cagcagggtgaagctggcaaagggtatgaaactgacctggtcatctgtggtaagaagttc
cctcttttgcagcagaaagaacctttcaagaaaaggtggttcgccctggattgccatgag
cggaggctgctctattacaagaacccactggatgccttcgagcagggccaggtttttctt
gggaacaaggagcagggatatgaagcctacgaagacctgcccaagggcatccgaggaaat
cgctggaaagccggactcaccattgtcaccccagagcggagatttgtcctcacttgcccc
agtgagaaggaacagcaggaatggctggaaagtttgcggggtgtcctgtccagccccttg
acgcccctcaaccggcttagacagcattggcatggccacctccctcagccctcttcattt
cccttgcagctgcatcaacagagagtggccgcagcagcaggtgacccattaactgaggaa
ctggctgccactgaacacctggaactccttgtgggaagaagtttgcacctcggccctggc
tgcccaccatcagtgccccgcagtcagcagccattcctggcagtgaactctgccaggact
gaagctgtggctttatccatcagctccctgggccttccccgcaacccacctcggggatct
gaggatctggtgcatagatga

>gi568815581f:30732348_30994910|GENSCAN_predicted_peptide_5|240_aa
MAGLGLGSAVPVWLAEDDLGCIICQGLLDWPATLPCGHSFCRHCLEALWGARDARRWACP
TCRQGAAQQPHLRKNTLLQDLADKYRRAAREIQAGSDPAHCPCPGSSSLSSAAARPRRRP
ELQRFYRTQDLNFAILKVAVEKSITEVAQELTELVEHLVDIVRSLQNQRPLSESGPDNEL
SILGKAFSSGVDLSMASPKLVTSDTAAGKIRDILHDLEEIQEKLQESVTWKEAPEAQMQX

>gi568815581f:30732348_30994910|GENSCAN_predicted_CDS_5|720_bp
atggcgggcctgggcctgggctccgccgttcccgtgtggctggccgaggacgacctcggc
tgcatcatctgccaggggctgctggactggcccgccacgctgccctgcggccacagcttc
tgccgccactgcctggaggccctgtggggcgcccgcgacgcccgccgctgggcctgcccc
acttgccgccagggcgccgcgcagcagccgcacctgcggaagaacacgctactgcaggac
ctggccgacaagtaccgccgcgccgcacgcgagatacaggcgggctccgaccctgcccac
tgcccctgcccgggctccagttccctctccagcgcggccgcgaggccccggcgccgcccg
gaactgcagcggttttatagaacccaggacctgaactttgctattttgaaggtggcagta
gagaagagcatcacagaagttgctcaggagctgacagagctggtggaacatcttgtagac
attgtcagaagcctgcagaatcagaggcccctatcagaatctggaccagacaacgaactg
agcatcctgggcaaggctttttcttctggggtggatctttccatggcttctccaaagctg
gtgacttccgacacagctgcagggaaaatcagagatattctccatgacctagaagaaatt
caggaaaaattacaagaaagcgtcacctggaaagaggctcctgaagcacaaatgcaggnn