GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:59:20

Sequence gi568815581r:60347584_60625931 : 278348 bp : 42.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1357   1352    6                               1.05
 1.02 Term -  43888  43707  182  2  2   81   44   122 0.931   3.89
 1.01 Init -  44356  44299   58  1  1   85   78   111 0.965  11.32
 1.00 Prom -  60586  60547   40                              -5.25

 2.00 Prom +  68825  68864   40                              -5.75
 2.01 Init +  73801  73950  150  0  0   84   63   119 0.927   9.18
 2.02 Intr +  74529  74948  420  2  0  132   32   106 0.589   2.61
 2.03 Intr +  78200  78301  102  1  0  103   74    87 0.885   8.25
 2.04 Intr +  78578  78753  176  1  2  112   28   177 0.985  11.92
 2.05 Intr +  79135  79234  100  1  1   94   81   122 0.533  11.29
 2.06 Intr +  81779  81974  196  1  1   30   90   198 0.476  12.27
 2.07 Term +  83598  83683   86  1  2  121   48    70 0.493   3.14
 2.08 PlyA +  83798  83803    6                               1.05

 3.03 PlyA -  86120  86115    6                               1.05
 3.02 Term -  86696  86276  421  1  1  -22   42   378 0.239  15.98
 3.01 Init -  87855  87551  305  0  2  116   22   363 0.452  29.29
 3.00 Prom -  96139  96100   40                              -6.15

 4.23 PlyA -  97398  97393    6                               1.05
 4.22 Term - 100251  99998  254  1  2  118   55   331 0.998  27.62
 4.21 Intr - 104462 104297  166  2  1   77   76   171 0.956  13.41
 4.20 Intr - 106909 106719  191  2  2   68   70    68 0.839   1.38
 4.19 Intr - 108798 108713   86  2  2   53   63    54 0.899  -2.06
 4.18 Intr - 113204 113080  125  2  2   62   93   168 0.957  13.16
 4.17 Intr - 114332 114227  106  1  1   83   91    23 0.631   1.40
 4.16 Intr - 114478 114411   68  1  2   77   90    34 0.591  -0.72
 4.15 Intr - 116527 116438   90  1  0   52   94    79 0.756   4.17
 4.14 Intr - 118876 118708  169  0  1   36  107    91 0.054   4.83
 4.13 Intr - 131688 131565  124  1  1   97  107   -13 0.011   0.22
 4.12 Intr - 136907 136729  179  1  2   34   86   114 0.531   4.44
 4.11 Intr - 140174 139845  330  1  0   70   44   298 0.033  17.42
 4.10 Intr - 140528 140417  112  0  1   20   47    77 0.031  -4.68
 4.09 Intr - 144884 144741  144  0  0   38   47   122 0.100   2.43
 4.08 Intr - 147034 146883  152  0  2  120   97    42 0.435   7.19
 4.07 Intr - 152904 152816   89  0  2   80   94    72 0.539   4.85
 4.06 Intr - 165593 165489  105  2  0   63   23    98 0.005   0.29
 4.05 Intr - 178635 178211  425  1  2   72   91   378 0.157  29.16
 4.04 Intr - 181593 181460  134  2  2   77   71    84 0.461   4.97
 4.03 Intr - 209606 209527   80  2  2  115   27    67 0.010   0.73
 4.02 Intr - 210621 210514  108  0  0  105   92    -8 0.014   0.86
 4.01 Init - 213192 213082  111  0  0   40  105    99 0.297   6.93
 4.00 Prom - 215333 215294   40                              -5.25

 5.04 PlyA - 215428 215423    6                               1.05
 5.03 Term - 218043 217849  195  0  0   42   40   186 0.628   5.63
 5.02 Intr - 221018 220922   97  1  1   69   84    37 0.165   0.49
 5.01 Init - 237561 237527   35  0  2  113   89     8 0.342   2.92
 5.00 Prom - 241619 241580   40                              -5.65

 6.00 Prom + 250413 250452   40                              -7.55
 6.01 Init + 252832 253303  472  0  1  107  106   481 0.710  46.03
 6.02 Intr + 266080 266154   75  2  0   29   45   121 0.060   0.47
 6.03 Term + 267086 267360  275  0  2  -32   45   313 0.221   9.65
 6.04 PlyA + 267936 267941    6                               1.05

 7.00 Prom + 269789 269828   40                              -5.95
 7.01 Init + 275955 276166  212  2  2   59   77   297 0.824  24.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  55378  55170  209  2  2  132   49   166 0.976  13.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_1|79_aa
MGAKESRIGFLSYEEALRRALAGRGRGGGCKALLSATGSPFVSGESLPFPRAYACLLRAV
AIRFCHPSPFERLTLIRTI

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_1|240_bp
atgggtgccaaggagtcacggatcggattcctcagctacgaggaggcgctgaggagagcc
ttagctggaaggggacgaggaggcggctgcaaagcgctcctctctgctactggaagcccc
ttcgtatctggggagtccctgccttttcccagagcctatgcctgtctcttgagggctgtg
gccatccgcttctgccacccttcaccgtttgagcggctgactttgataagaacgatctga

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_2|409_aa
MPLSCARGGRWVAGEARADGGPTALSRRQAKNRATLSGDNWARAQRTRRKLSLDLCPKSE
KNFTNCAFLSGSPHHGVTQQAGMAHVQENEFNSLTRWCQDQHLTVFLGEGAPASPGLLCA
LPKSSLDPAHLAPFPSPDPSWRGQLQPPLRMRKWERGGGLGSVLAVAVALLRVLEPNRPL
PETARSQKQWVTNVSCLETSSSASPARDSLMRHAKGLDQDTFKTCKEYLRPLKKFLRKLH
LPRDLPQKKKLKYMKQSLVVLGDHINTFLQHYCQAWEIKHWRKMLWRFISLFSELEAKQL
RRLYKYTKSSQPAKFLVTFCASDAPERSLLADREDSLPKLCHAWGLHSNISGMKERLSNM
QTPGQGSPLPGQPRSQDHVKKDSLRELSQKPKLKRKRIKEAPETPETEP

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_2|1230_bp
atgcccctctcctgtgcccgaggtggccgctgggtggcaggggaggcccgggccgacggc
ggtcccaccgcactgtcgcgaaggcaggcgaagaacagggccacactgagtggggacaac
tgggcccgggcccagaggacacgaaggaagctctccctagacctctgtcccaaatcagaa
aagaattttacaaactgtgctttcctctcggggagcccccaccacggcgtaacccagcag
gcaggaatggcacacgtgcaggaaaatgagttcaacagccttaccaggtggtgtcaggat
cagcatctgacagtattcttgggagaaggggcgccagcctctcctggcctgctgtgcgct
ctgccaaagtcttcgctcgaccccgcacatcttgctccgttccctagtccagatcccagc
tggaggggccagctgcagccacccctaagaatgaggaaatgggagcggggtggggggctg
ggttctgtgttggcggttgccgtggctttgctccgagttctggagccaaaccgcccactc
cctgagacggctaggtcacagaagcagtgggtgacaaatgtgtcatgcctggagacaagc
tccagcgccagccctgctagagactcgctcatgcgccatgccaagggcctggatcaggac
accttcaaaacttgtaaagaatacctaagaccgctgaagaagttcctgcgaaagttgcac
ctgcccagggaccttccccagaagaagaagctgaagtacatgaagcagagccttgtggtc
ctaggggaccacatcaacacctttctgcagcattactgccaagcctgggaaatcaaacac
tggagaaagatgctctggcggttcatctccctcttctcggagctggaagcaaagcagctt
cgccgactttacaagtacaccaagagcagccagccggccaagttcctggtgacattctgc
gcctcggatgcgccggagaggtccttgctggccgaccgggaagacagtctgcccaagctc
tgccatgcatgggggctgcacagcaacatcagcggcatgaaggagcggctgtccaacatg
cagaccccaggtcaagggagccccctgcctgggcagccaagatcccaggaccatgtcaag
aaagattctttaagggagctttctcaaaaaccaaaactcaagaggaagaggataaaggaa
gccccagaaactccagagactgaaccgtaa

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_3|241_aa
MTKRKAEGDAKGDKAKTKDEPQKRSARLSAKPAFPKPEPKPKMAPAKKGEKVPKGKKGKA
DAGKEGIALQKMKMPKQIRHRKLKVLEMPSEVCAFLITVYIWRPRCNFLRLSRIRVHLTP
AASTMPPKFDPNEIKVIYLRCTGDATSALAPKIGPLGLSPKNVGGDIAKATGDWKGLRIT
VKLTIQNRQAQIEVVPSASALIIKALKEPPETERNRKTLNTVGISLLMRSSTLLDRWSTD
P

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_3|726_bp
atgaccaagagaaaggctgaaggggatgctaaaggagataaagccaagacgaaggacgaa
ccacagaaaagatccgcgaggttgtctgctaaacctgcttttccaaagccggagcccaag
cctaaaatggcccctgcaaagaagggagagaaggtacccaaagggaaaaagggaaaagct
gatgctggcaaggagggaatagccctgcagaaaatgaagatgccaaaacagatcaggcac
agaaagctgaaggtgctggagatgccaagtgaagtgtgtgcatttttgataactgtgtac
atctggaggccaaggtgcaactttcttcggttgtcccgaatccgggttcatctgacacca
gccgcctccaccatgccgccaaagttcgaccccaacgagatcaaagtcatatacctgagg
tgcaccggagatgccacttctgccctggcccccaagatcggccccctgggtctgtctcca
aaaaacgttggtggtgacattgccaaggcaacgggtgactggaagggcctgaggattaca
gtgaaactgaccattcagaacagacaggcccagattgaggtggtgccttctgcctctgcc
ctgatcatcaaagccctcaaggaaccaccagagacagaaagaaacagaaaaacattaaac
acagtgggaatatcacttttgatgagatcgtcaaccttgctcgacagatggagcaccgat
ccttag

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_4|1115_aa
MAGHPVFFLLIHLLPLDFSMGWTQTPGSNNWRRGWKERQAVAMFPGLTSNSRAQGILLCK
EHGCNAARQAWAKGLSLSASSMATHHTQGETGQQNAAALGPQGVLPDFHGCFLKAHGLSS
QCVVNAVWAETQPSGQKALLWTRAEISAGTEPGFLSNRDCDAFGLAGRCFLSHFLLGPAS
AAAVPQFAPGGGRAAVPSAVRPRGCHRPSESSGAAEGFATEGGGGLREEEAEEAEEEGRK
MAAVELEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYKADEVTVANTEILLD
TFRARWVSGAAQHQGWDINTQLYQQGRLCQLGSEFCELEVFAKVLRALDKRHLLHHCFQA
LMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAIQVGFVLAAFTDWRRVSVVFSGTRCK
LSVDLPFCGLEHSGPLLIAPLGSAPVGTLSRCPSETKLPEEGSGSNICCSAIFAVLQLSL
VIPQQVRDCSSSPAMEQSQMENDFDKLTEVGFRRLVITDFSKLKEDVRTHRKEAKNLEKR
LDKWLTRINSVEKTLNDLMELKTMARELHDTCTCFSSRFDLVEERVSVIEDQINEMNCFR
ENKIPRNPTYKGCEGPLQGELQTTAQQNKRGHKQMEEHSMLMNRKNQYHENGCTVQGGFL
SDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVECCVRLLHVRNGNCKYHLGEETFKLAQ
TYMDKLSKHGQQANKAALYGELCALLFAKSHYDEAYKWCIEAMKEITAGLPVKVVVDVLR
QASKACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGFYLLNVDNICQSVAI
YQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERAIGIITHILPE
DHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTAK
HYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYEN
AEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEYHNVLSNWNRLRDRQ
YSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_4|3348_bp
atggccggccacccagtgttctttctgctcatccacctactgcccttagacttcagcatg
ggctggacccagaccccaggatctaacaactggcgacgaggatggaaggagagacaggct
gttgctatgttccctgggctgacctcaaactcccgggctcaagggatcctcctgtgtaag
gaacatggctgcaatgcagcgaggcaggcatgggccaagggtcttagcttgtcagccagt
tccatggccactcatcatactcagggtgaaactggccagcagaatgctgcagccttgggg
ccacagggagtactgccagacttccacggatgtttccttaaggcccacggcctctcaagt
cagtgtgtggtgaatgctgtctgggcagagactcaaccgtcagggcagaaggctctactc
tggaccagggcagagatcagcgctgggacggaacccgggttcctctcgaaccgggattgt
gacgcttttggcctggctggccgctgttttctgtcccactttttactcgggcctgcgtcc
gctgccgccgtccctcagtttgcccccggaggaggcagggcggccgtgccttctgccgtg
cgcccgcgtggctgccaccgcccctccgaatcctccggggccgcagaggggttcgctacg
gagggaggtgggggccttcgggaggaggaggcggaggaggcggaggaggagggaaggaag
atggcggccgtggaactagagtggatcccagagactctctataacaccgccatctccgct
gtcgtggacaactacatccgctcccgccgagacatccgctccttgcccgagaacatccag
tttgatgtttactacaaggctgatgaggttactgtagcaaatactgaaattcttctggac
accttccgagctcgctgggtttcaggcgctgcacagcatcaggggtgggacatcaacacc
caactttaccaacagggacgcttatgtcaactgggcagtgaattttgtgaattggaagtt
tttgctaaagtactgagagctttggataaaagacatttgcttcatcattgttttcaggct
ttgatggatcatggtgttaaagttgcttcagtcttggcctactcattcagtaggcggtgc
tcttatatagcagaatcagatgctgcagtaaaggaaaaagccattcaggttggctttgtt
ttagctgctttcacggactggcgtcgagtgtctgtggttttttcaggcacacggtgcaag
ctttcagtggatctgccattctgtggtctggagcacagtggccctcttctcatagctcca
ctaggcagtgccccagtggggactctgtccaggtgcccctctgagacgaagcttccagag
gaaggatcaggcagcaatatttgctgttctgcaatatttgctgttctgcagctttcgctg
gtgataccccagcaagtaagggattgcagctcctcgccagcaatggaacaaagccagatg
gagaatgactttgacaagttgacagaagtaggcttcagaaggttggtaataacagacttc
tccaagctaaaggaggatgttcgaacccatcgcaaggaagctaaaaaccttgaaaaaaga
ttagacaaatggctaactagaataaacagtgtagagaagaccttaaatgacctgatggag
ctgaaaaccatggcgcgagaactacatgacacatgcacatgcttcagtagccgattcgat
ctagtggaagaaagggtatcagtgattgaagatcaaattaatgaaatgaattgcttcaga
gagaataaaatacctaggaatccaacctacaagggatgtgaaggacctcttcaaggagaa
ctacaaactactgctcaacaaaataaaagaggacacaaacaaatggaagaacattccatg
ctcatgaataggaagaatcagtatcatgaaaatggctgtactgtgcaaggtggctttctt
tcagatgcaggctggtacagtgatgctgagaaagtttttctgtcctgccttcagttgtgt
actctacacgatgagatgcttcattggtttcgtgcagtagaatgttgtgtgaggttgctt
catgtgcgaaatggaaactgcaaatatcatttgggtgaagaaacatttaaattagctcag
acatatatggataaactatcaaaacatggccagcaagcaaataaagctgcactctatgga
gaactgtgtgcactcctatttgcaaaaagtcactatgatgaggcatacaaatggtgcatc
gaggcaatgaaagaaattacagcaggcttaccagtgaaagttgtggtggatgtcttaaga
caagcttctaaggcttgtgtagtaaaacgtgaatttaagaaggcagaacagttaattaaa
catgcagtgtatttggcacgggatcattttggatccaaacacccaaaatattctgataca
ctgctagattatgggttctacttactcaatgtagataatatctgtcagtctgttgcaatt
tatcaggcagcccttgacattagacagtcagtgtttggtggcaaaaatatccacgtagca
acagctcatgaagatttggcctactcttcttatgtccaccagtatagctctgggaaattt
gacaatgcactatttcatgcagaaagagctattggtatcattacccacatcctacctgaa
gatcatcttcttttggcttcttcaaagagggtgaaagcacttattttagaggagattgca
attgattgtcataataaggaaactgaacagaggctgcttcaagaagctcatgatttgcac
ctgtcttcactccaactagctaaaaaagcttttggggaatttaatgtacagactgcaaaa
cactatggaaaccttggaagactttatcagtcaatgagaaaatttaaggaagctgaagaa
atgcacatcaaagcaattcagattaaagaacaacttcttggtcaagaagattatgaagta
gccctttcagtgggacatctggcttctttatataattatgacatgaatcagtatgaaaat
gctgagaaactttatttgcgatctatagcaattgggaagaaactttttggtgagggctac
agtggactagaatatgattatcgaggtctcattaaactttacaactccattggaaattac
gagaaagtgtttgaatatcacaatgttctgtctaactggaaccggttgcgagatcggcaa
tattcagtgacagatgctcttgaagatgtcagcaccagcccccagtccactgaagaagtg
gtgcagtccttcctgatttctcagaatgtcgagggaccgagctgctga

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_5|108_aa
MANIVKCCREVKLYSGMIKVHCILNLLGSSDPPTSACQAAGGPLIQETFWEPQLLVVIDS
NNPTTTTGLSQRQLMLILSTIALCNTDSPLRYGDIAIPCNNKGAYLRV

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_5|327_bp
atggccaatatcgtcaaatgctgtagagaggtcaagttgtacagtggcatgatcaaagtt
cactgcatccttaacctcctgggctcaagtgatcctcccacatcagcgtgccaagcagct
gggggaccactgatccaggaaaccttctgggagccacagcttctggtggttattgattcc
aacaatccaacaacgaccaccggcctgtcacagaggcaacttatgttaatcttatctacc
atcgctctgtgcaacacagattctcctttgcgctatggggacattgccatcccatgcaac
aacaaaggagcttacttacgggtttga

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_6|273_aa
MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRSLSQPLPPRPSPAALPG
GEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFAVCDGHGGREAAQFAREHL
WGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLARVPGGHGLRRPCTRSGQLALLA
AGTVTLTAKVCSFTPEARETTNPPEGTNNSRRAALKAVTLTGKVCSFIPEASETTNPPEG
RNSEHIRTSEGTNSGHTAFKNCNTRGKGLRFHS

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_6|822_bp
atggcggggctgtactcgctgggagtgagcgtcttctccgaccagggcgggaggaagtac
atggaggacgttactcaaatcgttgtggagcccgaaccgacggctgaagaaaagccctcg
ccgcggcggtcgctgtctcagccgttgcctccgcggccgtcgccggccgcccttcccggc
ggcgaagtctcggggaaaggcccagcggtggcagcccgagaggctcgcgaccctctcccg
gacgccggggcctcgccggcacctagccgctgctgccgccgccgttcctccgtggccttt
ttcgccgtgtgcgacgggcacggcgggcgggaggcggcacagtttgcccgggagcacttg
tggggtttcatcaagaagcagaagggtttcacctcgtccgagccggctaaggtttgcgct
gccatccgcaaaggctttctcgcttgtcaccttgccatgtggaagaaactggcgcgagtt
ccaggtgggcatgggctccgcaggccctgcactcggagcggccagctggcgctgctggcc
gcaggcactgtaacactcactgcgaaggtctgcagcttcactcctgaagccagggagacc
accaacccaccagaaggaacgaacaactccagacgcgcagcattaaaagctgtaacactc
accgggaaagtctgcagcttcattcctgaagccagcgagaccacgaacccaccagaagga
agaaactccgaacacatccgaacatcagaaggaacaaattctggacacactgcctttaag
aactgtaacactcgtggcaagggtctgcggtttcattcttga

>gi568815581r:60347584_60625931|GENSCAN_predicted_peptide_7|71_aa
MTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPK
ERERIEGLGGS

>gi568815581r:60347584_60625931|GENSCAN_predicted_CDS_7|213_bp
atgacgggtcttcctagcacatcagggacaactgccagtgtggtcatcattcggggcatg
aagatgtatgtagctcacgtaggtgactcaggggtggttcttggaattcaggatgacccg
aaggatgactttgtcagagctgtggaggtgacacaggaccataagccagaacttcccaag
gaaagagaacgaatcgaaggacttggtgggagn