Result of FASTA (ccds) for pF1KE0327
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0327, 618 aa
  1>>>pF1KE0327 618 - 618 aa - 618 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5044+/-0.000974; mu= 18.0171+/- 0.058
 mean_var=67.3059+/-14.052, 0's: 0 Z-trim(104.0): 29  B-trim: 2 in 1/48
 Lambda= 0.156332
 statistics sampled from 7687 (7697) to 7687 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.236), width:  16
 Scan time:  3.460

The best scores are:                                      opt bits E(32554)
CCDS73380.1 ALG9 gene_id:79796|Hs108|chr11         ( 618) 4241 965.9       0
CCDS73379.1 ALG9 gene_id:79796|Hs108|chr11         ( 611) 4166 949.0       0
CCDS41714.1 ALG9 gene_id:79796|Hs108|chr11         ( 447) 3074 702.7 2.7e-202
CCDS53709.1 ALG9 gene_id:79796|Hs108|chr11         ( 440) 2999 685.7 3.3e-197


>>CCDS73380.1 ALG9 gene_id:79796|Hs108|chr11              (618 aa)
 initn: 4241 init1: 4241 opt: 4241  Z-score: 5165.6  bits: 965.9 E(32554):    0
Smith-Waterman score: 4241; 100.0% identity (100.0% similar) in 618 aa overlap (1-618:1-618)

               10        20        30        40        50        60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
              550       560       570       580       590       600

              610        
pF1KE0 YTILKPRKAKQIRKKSGG
       ::::::::::::::::::
CCDS73 YTILKPRKAKQIRKKSGG
              610        

>>CCDS73379.1 ALG9 gene_id:79796|Hs108|chr11              (611 aa)
 initn: 2675 init1: 2675 opt: 4166  Z-score: 5074.2  bits: 949.0 E(32554):    0
Smith-Waterman score: 4166; 98.9% identity (98.9% similar) in 618 aa overlap (1-618:1-611)

               10        20        30        40        50        60
pF1KE0 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MASRGARQRLKGSGASSGDTAPAADKLRELLGSREAGGAEHRTELSGNKAGQVWAPEGST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 FFIQPHKEERFLFPVYPLICLCGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWL
       :::::::::::::::::::::::::::::::       ::::::::::::::::::::::
CCDS73 FFIQPHKEERFLFPVYPLICLCGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWL
              370       380       390              400       410   

              430       440       450       460       470       480
pF1KE0 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWY
           420       430       440       450       460       470   

              490       500       510       520       530       540
pF1KE0 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKC
           480       490       500       510       520       530   

              550       560       570       580       590       600
pF1KE0 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVN
           540       550       560       570       580       590   

              610        
pF1KE0 YTILKPRKAKQIRKKSGG
       ::::::::::::::::::
CCDS73 YTILKPRKAKQIRKKSGG
           600       610 

>>CCDS41714.1 ALG9 gene_id:79796|Hs108|chr11              (447 aa)
 initn: 3074 init1: 3074 opt: 3074  Z-score: 3745.3  bits: 702.7 E(32554): 2.7e-202
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 447 aa overlap (172-618:1-447)

             150       160       170       180       190       200 
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
                                     ::::::::::::::::::::::::::::::
CCDS41                               MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
                                             10        20        30

             210       220       230       240       250       260 
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
               40        50        60        70        80        90

             270       280       290       300       310       320 
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
              100       110       120       130       140       150

             330       340       350       360       370       380 
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
              160       170       180       190       200       210

             390       400       410       420       430       440 
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
              220       230       240       250       260       270

             450       460       470       480       490       500 
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
              280       290       300       310       320       330

             510       520       530       540       550       560 
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
              340       350       360       370       380       390

             570       580       590       600       610        
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
              400       410       420       430       440       

>>CCDS53709.1 ALG9 gene_id:79796|Hs108|chr11              (440 aa)
 initn: 1527 init1: 1527 opt: 2999  Z-score: 3654.0  bits: 685.7 E(32554): 3.3e-197
Smith-Waterman score: 2999; 98.4% identity (98.4% similar) in 447 aa overlap (172-618:1-440)

             150       160       170       180       190       200 
pF1KE0 LRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
                                     ::::::::::::::::::::::::::::::
CCDS53                               MMLAFLVLSTGMFCSSSAFLPSSFCMYTTL
                                             10        20        30

             210       220       230       240       250       260 
pF1KE0 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALIL
               40        50        60        70        80        90

             270       280       290       300       310       320 
pF1KE0 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALA
              100       110       120       130       140       150

             330       340       350       360       370       380 
pF1KE0 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICL
              160       170       180       190       200       210

             390       400       410       420       430       440 
pF1KE0 CGAVALSALQHSFLYFQKCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
       ::::::::::       :::::::::::::::::::::::::::::::::::::::::::
CCDS53 CGAVALSALQ-------KCYHFVFQRYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFR
              220              230       240       250       260   

             450       460       470       480       490       500 
pF1KE0 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEF
           270       280       290       300       310       320   

             510       520       530       540       550       560 
pF1KE0 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSN
           330       340       350       360       370       380   

             570       580       590       600       610        
pF1KE0 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRKKSGG
           390       400       410       420       430       440




618 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 15:48:45 2016 done: Thu Nov  3 15:48:45 2016
 Total Scan time:  3.460 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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