GENSCAN 1.0	Date run:  7-Nov-116	Time: 04:39:59

Sequence gi568815595r:126003794_126260979 : 257186 bp : 45.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   1887   1882    6                               1.05
 1.10 Term -   3432   3223  210  0  0   92   36   128 0.972   5.29
 1.09 Intr -   5087   4939  149  0  2  120  115   189 0.977  24.75
 1.08 Intr -   8956   8822  135  2  0   65   94    69 0.981   5.74
 1.07 Intr -  11780  11701   80  1  2  102   76    47 0.717   4.09
 1.06 Intr -  13082  12938  145  0  1  125   99   212 0.999  25.34
 1.05 Intr -  19139  18993  147  0  0  127   98   158 0.997  20.91
 1.04 Intr -  19583  19383  201  0  0   56   42   102 0.742   1.66
 1.03 Intr -  22686  22542  145  0  1  119   80   164 0.923  18.56
 1.02 Intr -  29885  29814   72  2  0  119  109   128 0.983  17.60
 1.01 Init -  35313  35230   84  0  0   90   81    49 0.911   5.22
 1.00 Prom -  36075  36036   40                              -4.46

 2.05 PlyA -  40297  40292    6                               1.05
 2.04 Term -  46988  46953   36  2  0  112   42    35 0.773  -1.36
 2.03 Intr -  47257  47114  144  1  0   95   64   193 0.780  18.08
 2.02 Intr -  52720  52565  156  1  0   74   51   153 0.096  10.41
 2.01 Init -  64426  64154  273  1  0   72  110   141 0.202  11.68
 2.00 Prom -  64685  64646   40                              -8.46

 3.00 Prom +  64730  64769   40                              -5.26
 3.01 Init +  64896  64960   65  2  2   69   36    24 0.030  -4.02
 3.02 Intr +  66311  66468  158  2  2   68  105    66 0.734   5.95
 3.03 Intr +  70426  70821  396  2  0   74   49   164 0.748   5.65
 3.04 Intr +  74521  74742  222  2  0   66   35   158 0.474   6.40
 3.05 Intr +  78289  78683  395  2  2  111   29   144 0.308   5.17
 3.06 Intr +  79341  79410   70  2  1   44   27    87 0.456  -3.05
 3.07 Intr +  80570  80651   82  0  1   53   70   135 0.323   6.90
 3.08 Intr +  87284  87351   68  2  2   90   83    54 0.114   3.65
 3.09 Term +  91396  91559  164  2  2   52   47    79 0.082  -1.70
 3.10 PlyA +  91831  91836    6                               1.05

 4.31 PlyA -  92858  92853    6                               1.05
 4.30 Term - 100053  99998   56  1  2   93   49   122 0.442   6.52
 4.29 Intr - 102132 101933  200  2  2   93   59   383 0.547  34.89
 4.28 Intr - 103453 103348  106  2  1   98   45   148 0.982  10.77
 4.27 Intr - 103669 103624   46  1  1   68   75    31 0.742  -2.22
 4.26 Intr - 104985 104757  229  2  1   83   74    72 0.298   3.17
 4.25 Intr - 105721 105586  136  2  1   80   36    60 0.538  -0.37
 4.24 Intr - 106316 106151  166  2  1   33  109   202 0.902  16.33
 4.23 Intr - 109087 108989   99  1  0   38  103    66 0.903   3.41
 4.22 Intr - 110863 110764  100  0  1  101   77   155 0.947  15.81
 4.21 Intr - 114305 114212   94  0  1  129  100    98 0.996  14.12
 4.20 Intr - 120658 120571   88  1  1   73   99    54 0.950   4.54
 4.19 Intr - 121928 121823  106  1  1   41   99   140 0.797  10.62
 4.18 Intr - 126500 126430   71  2  2  148   92    75 0.998  11.88
 4.17 Intr - 127741 127591  151  0  1   86   75   358 0.985  34.46
 4.16 Intr - 131869 131742  128  1  2   69   75   167 0.927  12.98
 4.15 Intr - 133090 132971  120  1  0   77   65   203 0.999  17.59
 4.14 Intr - 134167 134020  148  0  1  116   83   264 0.996  28.94
 4.13 Intr - 143133 143042   92  0  2   76   94    69 0.914   5.09
 4.12 Intr - 146738 146613  126  2  0   14   94   100 0.701   4.08
 4.11 Intr - 149788 149651  138  1  0   87   91   134 0.998  14.26
 4.10 Intr - 150850 150761   90  1  0   95   89    99 0.990  10.89
 4.09 Intr - 151710 151609  102  0  0   53  113    76 0.875   6.97
 4.08 Intr - 153715 153550  166  0  1   92   77   322 0.999  31.46
 4.07 Intr - 154846 154612  235  2  1   84   85   227 0.993  18.75
 4.06 Intr - 157209 157060  150  1  0  120   92   124 0.930  16.13
 4.05 Intr - 181523 181444   80  1  2  111   66    22 0.015   1.49
 4.04 Intr - 208181 208028  154  0  1   76   78   107 0.179   7.63
 4.03 Intr - 211883 211793   91  2  1   60   97    12 0.027  -1.13
 4.02 Intr - 228695 228552  144  2  0   25   91    63 0.021   0.78
 4.01 Init - 234604 234413  192  1  0   82   58   140 0.092   9.37
 4.00 Prom - 250665 250626   40                              -1.36

 5.02 PlyA - 250962 250957    6                               1.05
 5.01 Term - 255941 255795  147  2  0   51   48   191 0.974   9.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 234604 234317  288  1  0   82   29   197 0.884   8.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:126003794_126260979|GENSCAN_predicted_peptide_1|455_aa
MVPASASGEGFRKLPIIVEAEGEPVCHMANTGQIDDPQEQHRVISSNLALIQVQATVVGL
LAAVAALLLGVVSREEVDVAKVELLCASSVLTAFLAAFALAVSIWMSASQRMPVNTGGHE
LTPRGSIAPSIFGAALMQHGAVGCLSLWFLVIWELGSHGSLLSIMCTGVLMVCIVIGARK
LGVNPDNIATPIAASLGDLITLSILALVSSFFYRHKDSRYLTPLVCLSFAALTPVWVLIA
KQSPPIVKILKFGWFPIILAMVISSFGGLILSKTVSKQQYKGMAIFTPVICGVGGNLVAI
QTSRISTYLHMWSAPGVLPLQMKKFWPNPCSTFCTSEINSMSARVLLLLVVPGHLIFFYI
IYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNHCIPYLTGLG
DLLGTGLLALCFFTDWLLKSKAELGGISELASGPP

>gi568815595r:126003794_126260979|GENSCAN_predicted_CDS_1|1368_bp
atggtgccagcatctgcttctggtgagggctttaggaagcttccaattattgtggaagct
gaaggggagccagtgtgtcacatggccaacactggacaaattgatgacccccaggagcag
cacagagtcatcagcagcaacctggccctcatccaggtgcaggccactgtcgtggggctc
ttggctgctgtggctgcgctgctgttgggcgtggtgtctcgagaggaagtggatgtcgcc
aaggtggagttgctgtgtgccagcagtgtcctcactgccttccttgcagcctttgccctg
gctgtttccatctggatgtctgcttctcagaggatgccagtaaacacaggaggccatgag
ctcaccccgaggggttccattgctccgagcatctttggagcagccctcatgcagcatggg
gctgtgggctgcctgtctctgtggttcctggtgatttgggagctcgggagccacgggtca
ctccttagcatcatgtgcacaggggtgctgatggtctgtatagtgattggtgctcgaaag
ctcggggtcaacccagacaacattgccacgcccattgcagccagcctgggagacctcatc
acactgtccattctggctttggttagcagcttcttctacagacacaaagatagtcggtat
ctgacgccgctggtctgcctcagctttgcggctctgaccccagtgtgggtcctcattgcc
aagcagagcccacccatcgtgaagatcctgaagtttggctggttcccaatcatcctggcc
atggtcatcagcagtttcggaggactcatcttgagcaaaaccgtttctaaacagcagtac
aaaggcatggcgatatttacccccgtcatatgtggtgttggtggcaatctggtggccatt
cagaccagccgaatctcaacctacctgcacatgtggagtgcacctggcgtcctgcccctc
cagatgaagaaattctggcccaacccgtgttctactttctgcacgtcagaaatcaattcc
atgtcagctcgagtcctgctcttgctggtggtcccaggccatctgattttcttctacatc
atctacctggtggagggtcagtcagtcataaacagccagacctttgtggtgctctacctg
ctggcaggcctgatccaggtgacaatcctgctgtacctcgcagaagtgatggttcggctg
acttggcaccaggccctggatcctgacaaccactgcatcccctaccttacagggctgggg
gacctgctcggtactggcctcctggcactctgctttttcactgactggctactgaagagc
aaggcagagctgggtggcatctcagaactggcatctggacctccctaa

>gi568815595r:126003794_126260979|GENSCAN_predicted_peptide_2|202_aa
MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRE
TTWSIGLQVTVPFMFAGLGLSWAGMLLDYFQGKKLRGFSCELTRSPHGVLPESFFTIMCQ
VVVPILLSGLCMMTAGLVMNTIQHWPVFVEVKDLLTLVPPLVGLKGNLEMTLASRLSTAV
SGHLDIRGGHNPNALAFHYQTG

>gi568815595r:126003794_126260979|GENSCAN_predicted_CDS_2|609_bp
atggatgggacagagacccggcagcggaggctggacagctgtggcaagccaggggagctg
gggcttcctcaccccctcagcacaggaggactccctgtagcctcagaagatggagctctc
agggcccctgagagccaaagcgtgacccccaagccactggagactgagcctagcagggag
accacctggtccataggccttcaggtgaccgtgcccttcatgtttgcaggcctgggactg
tcctgggccggcatgcttctggactatttccagggcaagaagctgcgaggcttcagctgt
gagcttacccggtccccacatggggtcttgcctgaatctttcttcaccatcatgtgccag
gtcgtggtgcccattctgctgtccggcttgtgcatgatgacagccggcctggtgatgaac
accattcaacactggcctgtgtttgtggaggtgaaagaccttttgacattggtgccgccc
ctggtgggcctgaaggggaacctggagatgacactggcatccagactctccacagctgta
agtggacacctggacattcgaggcggccacaaccccaatgccttggctttccactaccaa
actggatga

>gi568815595r:126003794_126260979|GENSCAN_predicted_peptide_3|539_aa
MPGPTTLSSSALALKIDSLQLQAPRIPSRVNSERAHQDLPRILEAGREQQLMMYKRSFRA
GVPNPRWELGHTAEDIKTRILTTDKEGYLIMIRGIEGNVLILIKGICEKPKANKLSESLK
VFPLRLGTRQESLFLPILLNTVPEVLASTIQQGKEMRRIQLEKEEVKLSLFTDDIILYVK
NHKGSTYTQTITASKQVQQGVGLEDAAMLVKLSQAHTGSLEIMERQLVEKKGEEEDLDPA
HTGRNPYHTELSYRPALQAPLCFSGWKPQNHEEEGCLAEQGWGISQLWTWPKAPQLHLNV
GVFARRTCSNVPVSLTARADEQPSTGWRRLLWESGLWARKPLIPEPQGGAKMPEDASGGI
ASKVPTEDIGQCLHMVLVVPTGGDTGQPPKTKNCPTPNVSSVEAEKPCYGAVFRLLKALR
FQINGQNHEEDLLKTTGAPLAPPRERYGRGAYAAAGFIMELSRATWNSKESKKSTFELGL
TDLYEGQNQQPIWIPSRHLKPYHEPDAKEEIPGGSQGPPVAAVLRLMLRRTPTVTSNTC

>gi568815595r:126003794_126260979|GENSCAN_predicted_CDS_3|1620_bp
atgcctggtcccactaccctctccagctctgccctagccttgaaaattgacagcctgcaa
ctgcaagctccacgaattccaagtagagtaaactccgagagagcacaccaagacctgcca
agaatcttagaagcaggaagagagcagcaactcatgatgtacaagagatcctttagagca
ggggtccccaacccccgttgggaactgggccacacagcagaagacattaagacaagaatt
cttaccacagacaaagaaggatatttgataatgataagaggaatagaagggaatgttctc
atcctgattaagggcatctgtgagaaacccaaagctaacaaacttagcgagagtctgaaa
gttttcccactaagattaggaacaagacaagaatccctgtttttgccaattctattaaac
actgtacctgaggttctagccagcacaattcagcaaggaaaagaaatgagacgtatccag
cttgaaaaggaagaagtaaaattatccctgtttacagacgacataatcttatacgtaaaa
aatcataagggatccacatacacacaaactattacagccagtaaacaagttcagcaaggt
gtaggactggaggacgcagcaatgctggtaaaactgagccaggctcacactggaagcctg
gagatcatggagagacagctagtggagaagaaaggagaggaggaggacttggaccctgcc
cacactgggaggaacccgtaccacacagagctgagctatcggccggctctccaggcccca
ctctgcttctctgggtggaagccccagaaccatgaggaggaaggatgcttggcagaacag
gggtgggggatctcccagctgtggacatggccaaaggcccctcagctccacctgaatgtt
ggagtgtttgcaaggagaacatgctccaatgtccctgtgtcactgacagctcgtgcagat
gaacaaccaagcacaggctggaggaggctcctgtgggaaagtgggctgtgggccaggaaa
cctctaatcccagagccccagggaggagccaagatgccagaagatgccagtggaggcatt
gcctccaaggtccccacagaggacattgggcaatgtctgcacatggttttggttgtcccg
acagggggtgatacaggacagccccccaaaacaaagaactgccccaccccaaatgtcagt
agtgtggaggccgagaaaccctgctatggggcagtgttcagactcctcaaagccctaagg
tttcagatcaatggtcagaaccacgaggaggacctgctaaagacaactggggccccactg
gcgcccccgcgggagcgctacgggagaggcgcctatgcggctgcaggttttattatggag
ctgtcaagggccacatggaactccaaggagtccaagaagtctacatttgaacttggcctt
acagatctctatgaaggccaaaatcaacagccgatttggataccatcaagacacctgaaa
ccttatcatgagccagatgccaaggaagagattccaggaggatcccaaggaccccctgtt
gcagccgtgttgaggctgatgctcaggaggaccccaactgtcacaagcaacacctgttga

>gi568815595r:126003794_126260979|GENSCAN_predicted_peptide_4|1267_aa
MGPPSSRPQNGRSTHSLHCAPGKATDTQCQPMKAAKRGAVPHKDTGAELLKAMEAHLLHQ
HNLDTKTFLTRKENYKPIFLMNMDVKLLNKILANQIRQCTELYTTCKWNLFQSPLQVQAT
LHARIQLSALDLGTSEGLPQWKGVSIGSISPVFDILTYRPLTLQPHHGSVSSVNYLETCQ
GYKSCGPDFLAQQPEFLGAMCQPGAGTSQFAWGCKHATPPGPSNPPATMKIAVIGQSLFG
QEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAK
YQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGF
SIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLP
QPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTS
GLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGAASS
VLELTEAELVTAEAVRSVWQRILPKVLEVEDSTDFFKSGAASVDVVRLVEEVKELCDGLE
LENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMAVNKRTVRMPHQLFIGGEFVD
AEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLMYRL
ADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARP
NRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAEL
TLKAGIPKGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSL
ELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEDSIHDEFVRRVVEEVR
KMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGSLPCSSSDP
TRYRPPGSTPPRAPDRTASGTGHFHLDVPQALQTQRGFSCFLGLHAFAAARLSGGFPVSP
PGELLLLQLTGHPSPGMPVSQGIGHRTPQQSSRDHCTAAVTVHLPSSHSRWTHSVKSTVR
PTSKNKPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLA
SGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRV
KTVTFEY

>gi568815595r:126003794_126260979|GENSCAN_predicted_CDS_4|3804_bp
atggggccaccatcgtccagaccccagaatggtagatccactcacagcttgcattgtgca
cctggaaaagccacagacactcaatgccagcccatgaaagcagccaagaggggagctgta
ccccacaaagacacaggggcagagctgctcaaggccatggaagcccacctcttgcatcag
cacaacttggatacaaagactttccttacaagaaaagaaaactacaaaccaatatttctc
atgaatatggatgtaaagctcctcaacaaaatattagcaaatcaaatccgacagtgcaca
gaactatacaccacctgcaagtggaatttattccagagtccactgcaggtccaggcgact
ctccatgcaaggattcagctgtcagctcttgatcttgggacttcagagggactgccacag
tggaaaggtgtatctatagggtcaatctcccctgtttttgacatcctgacctaccgcccg
ctgaccctccagccccaccatggcagtgtatccagtgtcaactacctggagacttgccag
ggctataagtcttgtggccctgacttcctggctcagcagcctgagtttctgggggccatg
tgccagccaggtgctggcaccagccagtttgcatgggggtgcaaacacgcaacaccccca
ggtccttccaaccctcctgctaccatgaagattgcagtgattggacagagcctgtttggc
caggaagtttactgccacctgaggaaggagggccacgaagtggtgggtgtgttcactgtt
ccagacaaggatggaaaggccgaccccctgggtctggaagctgagaaggatggagtgccg
gtattcaagtactcccggtggcgtgcaaaaggacaggctttgcctgatgtggtggcaaaa
taccaggctttgggggccgagctcaacgtcctgcccttctgcagccaattcatccccatg
gagataatcagtgccccccggcatggctccatcatctatcacccgtcactgctccctagg
caccgaggggcctcggccatcaactggaccctcattcacggagataagaaaggggggttt
tccatcttctgggcggatgatggtctggacaccggagacctgctgctgcagaaggagtgt
gaggtgctcccggacgacaccgtgagcacgctgtacaaccgcttcctcttccctgaaggc
atcaaagggatggtgcaggccgtgaggctgatcgctgagggcaaagcccccagactccct
cagcctgaggaaggagccacctatgaggggattcagaagaaggagacagccaagatcaac
tgggaccagccggcagaggccattcacaactggatccgcgggaacgacaaggtgccggga
gcctggacagaggcctgtgaacagaaactgacatttttcaactcaacgctgaacacttca
ggcctggtgcccgagggagacgctttgcccatcccaggagcccatcggccaggggtggtc
accaaagcaggactcatcctctttgggaatgatgacaaaatgctgctggtgaagaatatt
cagctggaggatggcaaaatgatcctggcctcgaacttctttaagggggcagccagcagt
gtccttgagctgacagaggcagagctggttactgcggaggctgtgcggagtgtttggcag
cggatcctccccaaagtcctggaggttgaagactccactgatttcttcaagtcaggggcc
gcgtctgtggacgttgtgaggctggtggaggaagtgaaggagctgtgtgatggcctggag
ttagaaaatgaagatgtgtacatggcatccacctttggggacttcatccagctgttagtg
aggaagctgcgaggggacgatgaggagggcgagtgcagcattgactacgtggaaatggca
gtgaacaagcgcactgtccgcatgccccaccagctcttcattgggggggagttcgtggat
gccgagggcgccaagacctctgagaccatcaatcccaccgatggaagtgtcatctgccag
gtatccctggcccaagtcaccgacgtcgacaaggcagtggccgcagccaaggatgccttt
gagaatggacggtgggggaagatcagtgcgcgggaccggggccggctgatgtacaggttg
gcagatctcatggagcagcaccaggaggagctggccaccattgaggccctggatgcgggt
gccgtctacacgctggccctgaagacccacgtgggcatgtccatccagaccttccgctac
tttgctggctggtgtgacaagatccagggctccaccatccccatcaaccaggccagaccc
aaccgcaacctgaccttgaccaggaaggagcctgttggggtttgtggcatcatcatcccc
tggaactatcccctgatgatgctgtcctggaagacagctgcctgcctggctgccgggaac
acagtggtgatcaagcctgctcaggtgaccccactcacagccttgaagtttgcagagctg
acattaaaggccggcattcccaaaggtgtggttaacgtcctcccaggatctggctccctg
gtcggccagagactctcagaccatcctgatgtgaggaaaatcgggttcacaggctccaca
gaggtgggcaagcacatcatgaaaagctgtgccataagtaacgtgaagaaggtgtccctg
gaactgggcgggaagtcacccctcatcatctttgctgactgtgacctcaacaaggctgtg
cagatggggatgagttctgttttcttcaacaaaggagagaattgcattgcagcaggccga
ctctttgtggaggactccattcatgatgagttcgtgcggagagtggtagaagaggtgcgg
aagatgaaggtgggcaacccgctggacagggacaccgaccacgggccgcagaatcaccat
gcccaccttgtgaagctgatggagtactgccagcatggcgtgaaggaaggggccacactg
gtctgcggcgggaatcaggtccctcggccaggatctctcccctgcagcagctcagaccct
accagatacaggcctccaggctccaccccacccagagctcctgaccgcacagccagcggc
actggacacttccacctggatgtcccccaggcccttcaaactcaaagaggcttctcctgc
tttcttgggctccatgcatttgctgctgctcggcttagtggaggctttccagtgtcccca
cctggagagctcctgcttcttcagctcacaggacatccaagcccgggcatgcccgtgtca
cagggcatcgggcaccgcacacctcaacagagctctcgtgaccattgcactgctgctgtc
actgtccacttaccctcttcccactcccgctggactcactccgttaaaagcacggtgaga
cccacatcaaagaacaagccagggttcttctttgagccaactgttttcacagacgtggaa
gaccacatgttcatagccaaggaggagtccttcgggcctgtcatgatcatctctcggttt
gctgatggggacttggatgccgtgctgtctcgggccaatgccacggaatttggcctggct
tctggtgtcttcaccagggacatcaacaaggccctgtatgtcagtgacaagctccaggca
ggcactgtgtttgtcaacacgtacaacaagaccgacgtggccgctcccttcggaggattc
aaacagtctggatttggcaaagatctaggagaggcggctctgaacgagtacctgcgggtc
aagacagtgaccttcgaatactga

>gi568815595r:126003794_126260979|GENSCAN_predicted_peptide_5|48_aa
NLSHGGTAVSPDPICKSFQKTGIGAISSPPLPPAGQAVGPVQDLKAIR

>gi568815595r:126003794_126260979|GENSCAN_predicted_CDS_5|147_bp
aacctgagccatgggggcacggccgtatcccccgaccccatctgcaagagtttccagaag
accgggattggggccatcagcagccctccactgccccccgctggtcaggctgtggggccc
gtgcaggacctgaaggccattagatag