GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:42:31

Sequence gi568815594r:121229317_121480647 : 251331 bp : 38.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2300   2355   56  1  2   86   67    60 0.031   4.51
 1.02 Term +  12968  13121  154  2  1    8   48   234 0.887   7.81
 1.03 PlyA +  14015  14020    6                               1.05

 2.00 Prom +  18762  18801   40                              -4.95
 2.01 Init +  24284  24310   27  1  0   74   81    28 0.478   0.42
 2.02 Intr +  24755  24892  138  1  0   52   95    47 0.513   1.54
 2.03 Intr +  25767  25990  224  2  2   26   80   170 0.419   6.00
 2.04 Intr +  35102  35308  207  2  0   49  121   105 0.567   7.17
 2.05 Intr +  42148  42322  175  1  1   30   22    90 0.061  -4.38
 2.06 Intr +  48382  48556  175  0  1   93   77   104 0.179   8.39
 2.07 Intr +  54142  54246  105  2  0    5   71   127 0.153   1.97
 2.08 Intr +  54460  54771  312  2  0   46   20   255 0.054   9.73
 2.09 Intr +  58809  59056  248  1  2   23   41   174 0.006   2.46
 2.10 Term +  69071  69217  147  1  0   95   48   105 0.902   4.12
 2.11 PlyA +  69420  69425    6                               1.05

 3.04 PlyA -  69892  69887    6                               1.05
 3.03 Term -  86762  86700   63  2  0   63   48   125 0.653   2.91
 3.02 Intr -  91006  90875  132  1  0   67   49    93 0.374   3.22
 3.01 Init -  93894  93829   66  0  0   45   69    29 0.215  -2.18
 3.00 Prom -  97160  97121   40                              -3.65

 4.04 PlyA -  98973  98968    6                               1.05
 4.03 Term - 100398  99998  401  1  2   66   32   233 0.831   9.79
 4.02 Intr - 111422 111136  287  1  2   77   66   182 0.360  10.96
 4.01 Init - 116075 115987   89  2  2   28   60   157 0.751   7.06
 4.00 Prom - 126550 126511   40                              -3.35

 5.07 PlyA - 126587 126582    6                               1.05
 5.06 Term - 127164 126944  221  1  2   59   42   164 0.645   5.12
 5.05 Intr - 140436 140149  288  1  0   85  -29   283 0.011  12.59
 5.04 Intr - 140884 140601  284  0  2   86   21   233 0.630  12.54
 5.03 Intr - 142972 142876   97  2  1   65   46    61 0.278  -2.25
 5.02 Intr - 151387 150992  396  2  0   93   78   620 0.110  55.13
 5.01 Init - 176813 176672  142  2  1   62   48   140 0.756   7.74
 5.00 Prom - 183957 183918   40                              -5.15

 6.02 PlyA - 183983 183978    6                               1.05
 6.01 Sngl - 205121 204618  504  2  0   45   42   261 0.314  12.99
 6.00 Prom - 209720 209681   40                              -8.35

 7.00 Prom + 210008 210047   40                              -3.75
 7.01 Init + 210506 210667  162  1  0   38   94   177 0.343  13.09
 7.02 Term + 210762 210839   78  2  0   18   48    99 0.302  -4.32
 7.03 PlyA + 211019 211024    6                               1.05

 8.02 PlyA - 211323 211318    6                               1.05
 8.01 Sngl - 212867 212406  462  2  0   68   48   292 0.808  19.11
 8.00 Prom - 220956 220917   40                              -4.95

 9.00 Prom + 221455 221494   40                              -4.05
 9.01 Sngl + 222411 222635  225  2  0   54   55   280 0.453  16.19
 9.02 PlyA + 223363 223368    6                               1.05

10.00 Prom + 223488 223527   40                              -6.85
10.01 Init + 228976 229133  158  0  2   43  100   138 0.934   9.93
10.02 Term + 232049 232214  166  2  1   60   54   167 0.924   6.91
10.03 PlyA + 232463 232468    6                              -0.45

11.03 PlyA - 232545 232540    6                               1.05
11.02 Term - 233287 233188  100  0  1   38   48   103 0.002  -2.08
11.01 Init - 250565 250426  140  2  2   74   96    90 0.688   8.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 225659 225611   49  2  1   69   97    43 0.879   4.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_1|69_aa
MDVDKSEMQLFGTKVQLSLNFEEQPPSLKPSREHQQNHTGGLVSTEGHKLVKVNSAVAAE
QLSGKSAGI

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_1|210_bp
atggatgtagataaatcagaaatgcagctgtttgggaccaaagtccagttatcactgaat
tttgaagagcagccaccctccctgaagccatctagggaacaccagcagaatcacactgga
ggactggtgtccacagaaggccacaagcttgtgaaggtcaactcagctgtggcagctgag
caactgtcgggcaagtctgctggaatctga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_2|585_aa
MKMQVTRFLVIKDSVASCLHSPLPSVTSLTLGKAGCHLVSSSPCSEKLSAPAHIPCCDYR
YEPPCLTCVGYFYGQLMLHPAGPSEEPYVMNVRIVPLEDPRGKHFQQPHPSFVKYALSVL
TLQYFQVTRGCAKVAAIETTTFEERVLLLTVPKWRGMPCHTRPHTGKHQLRSEGRNNEQK
VWAKGFYCGFGGKGKVEARHTQKTMRVSDIEATITLSPGPGGGALRELSEGALLFRGVKN
SNSVCLALVAPSNLVFMGFMWSRIEAAPLPNTRWCLPHGYSGPANSGGCYYITTGMSCWL
SDLYPRHDGVHVGLQGKDLEHDIPVDLGSRPTSVDPVSRSAPGPQGPKAPVDSGSRTTPA
NPGAGPSPVDPSSRPAPVASGFRLIMIDQNTKLIPVPGWPLRLRLKIYLSSRSASLDSGS
RFAPVDTNFIPVPTDRGHSHAPEDPVDRLTSVDPKIQTIIREYDKHLYANKLENLEEMDK
FLGTYTLPRLNQEETESLNRPITGSEIQAIINSLPTKKIPGPDGFTAKFYQKYKEELAKI
LYTFSLLLGPIRHISYPGDDGGSDGLNLSPIFGKCELGSIMETSG

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_2|1758_bp
atgaagatgcaagtaactcggttcctggtcattaaagatagtgtggcttcctgcttgcac
tctcctttgccctctgttacatcgctcactctggggaaagctggctgccacctcgtgagc
agcagtccatgtagtgagaaactgagtgctcctgctcacatcccttgttgcgattatagg
tatgaaccaccatgcctgacatgtgttggttacttctatggtcaactgatgctccatcca
gcaggaccttctgaggagccttatgtaatgaatgtcagaattgtccctctagaagatcca
agggggaagcatttccagcagccccatccttcatttgtcaagtatgctctatcagtgtta
actcttcagtacttccaggttacacgtggatgtgccaaggtggcagccatagagacaact
acctttgaagaaagagttttattactcacagttcccaagtggaggggcatgccatgccat
acaaggccacacacagggaagcaccagcttcgatcagaaggcagaaacaatgagcagaaa
gtatgggcaaagggcttttattgtggttttggggggaaaggaaaagtcgaggcaagacac
acgcagaaaactatgagagtgtcagacatagaagccaccatcacccttagcccaggacct
ggaggaggtgcactgagggaattatcagagggcgctctcctctttaggggtgtgaaaaac
agtaactctgtttgtttggctctagtagccccttctaacttggttttcatggggtttatg
tggtccagaatagaggcagctcctcttccaaacaccaggtggtgtctgccacatggctac
tcaggtcctgcgaactctggtggctgctactacatcactacagggatgtcctgctggctc
tcagatctctatccaagacatgatggtgtccatgttggactccaaggcaaggacctggag
catgacattccagtggacctagggtccaggcccacctctgtggacccagtttccaggtct
gccccagggccccagggccccaaggctccagtggactcagggtccaggaccactccagca
aaccctggtgctggaccatcccctgtagacccaagctcccggccagcccctgtggcttca
ggctttagactcatcatgatagaccaaaacaccaagctaattccagtgccaggttggccc
ctgcgactcaggctcaagatctacctcagcagtaggtcagcctctttggactcaggctcc
aggtttgcccctgtggacacaaattttatacctgtccccacagaccgaggccatagccat
gcccctgaagacccagttgacaggctaacctcagtggacccaaaaatacaaactatcatc
agagaatacgataaacacctctatgcaaataaactagaaaatctagaagaaatggataaa
ttcctgggcacatacactctcccaagactaaaccaggaggaaactgaatctctgaatagg
ccaataacaggttctgagattcaggcaataattaacagcctaccaaccaaaaaaattcca
ggaccagatggattcacagccaaattctaccagaagtacaaagaggagctggcaaaaatt
ctctataccttcagtcttctccttggccccataagacatatttcctaccctggtgatgat
ggaggctcagatggcctgaatctgagtccaatatttgggaaatgtgagctgggctccatc
atggaaacatctggctga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_3|86_aa
MKWKWYIQNPTDQEGTDELHRQQSSFLKHNQKTKVLLDSDTEHSGAERVDKQKISSACVP
EHMLIMENDEKTGGDSGEDESEYGQE

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_3|261_bp
atgaaatggaaatggtacatccagaatcccacagatcaggagggcacagatgaactgcac
agacagcagtcttcattcctcaagcacaatcaaaagacaaaggtgctccttgattcagac
acggagcacagtggtgcagaaagggtggacaaacagaaaatatccagtgcttgtgtgcct
gaacatatgttaatcatggaaaatgatgagaaaacaggaggagatagtggggaagatgag
agcgaatatggacaggaatga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_4|258_aa
MYWKDVEGSQDQREAEEMDLQQKATKGAQRVITIIKLFGRGSEWTDSDNYKDTDETFILF
VLMYDLSYFLTAGAFICKMVPFVQSTAVVTEILTMTCIAVERHQGLVHPFKMKWQYTNRR
AFTMLGNFEKEYDDVTIKMIFAIVQIIGFSNSICNPIVYAFMNENFKKNVLSAVCYCIVN
KTFSPAQRHGNSGITMMRKKAKFSLRENPVEETKGEAFSDGNIEVKLCEQTEEKKKLKRH
LALFRSELAENSPLDSGH

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_4|777_bp
atgtattggaaggatgttgaaggctcacaggatcagcgtgaagctgaagaaatggaccta
caacagaaagcgaccaagggagctcagagagtaattacaattatcaaactttttggcaga
ggctcagaatggactgatagtgataattacaaagacacagatgaaacctttattcttttt
gttttgatgtatgatttgtcctatttccttactgcaggtgctttcatttgcaagatggtg
ccatttgtccagtctaccgctgttgtgacagaaatcctcactatgacctgcattgctgtg
gaaaggcaccagggacttgtgcatccttttaaaatgaagtggcaatacaccaaccgaagg
gctttcacaatgctaggtaattttgaaaaggaatatgatgatgtcacaatcaagatgatt
tttgctatcgtgcaaattattggattttccaactccatctgtaatcccattgtctatgca
tttatgaatgaaaacttcaaaaaaaatgttttgtctgcagtttgttattgcatagtaaat
aaaaccttctctccagcacaaaggcatggaaattcaggaattacaatgatgcggaagaaa
gcaaagttttccctcagagagaatccagtggaggaaaccaaaggagaagcattcagtgat
ggcaacattgaagtcaaattgtgtgaacagacagaggagaagaaaaagctcaaacgacat
cttgctctctttaggtctgaactggctgagaattctcctttagacagtgggcattaa

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_5|475_aa
MINITNDQGYANQNHNVIPPYSCKNGHHQNTVDVGMDAVIRELFYIADADGQPVAGGGPA
SRERTAMQALNITPEQFSRLLRDHNLTREQFIALYRLRPLVYTPELPGRAKLALVLTGVL
IFALALFGNALVFYVVTRSKAMRTVTNIFICSLALSDLLITFFCIPVTMLQNISDNWLGE
LITHLRERHRHSYSNTQRYPLQQEEKPIEEPLHGQHPLEASDFRAQVSAPHQGGGRRGQS
TLPCQSLSSAIDSVDKLPVVKAKATHVVMNYVITKQTQESFQHFGQQAGLRDPGYTPTRV
SPLRRPTLPGPNPSTMDSGSGDKDRNLSDKWGLFGLRSLQKYDSGSFATQAYRGAQKPSP
MELIRAQANRMAEDPAALKPPKMDFPVTEGRKQPPRAHNLKPRLTNVHKHQENMTSPNEL
NKAPVTSPGVTEICDLSDREFKITVLRKLKEAQDNTEKEFRIVSEKFNKEIEIIF

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_5|1428_bp
atgatcaacatcactaatgatcagggatatgcaaatcaaaaccacaatgtgataccacct
tactcctgcaagaatggccatcatcaaaacacagtagatgttggcatggatgcagtgatc
agggaactcttctacattgctgatgcggatggccagccagtagcgggcggtggccccgcg
tcccgggagcgcacagcaatgcaggcgcttaacattaccccggagcagttctctcggctg
ctgcgggaccacaacctgacgcgggagcagttcatcgctctgtaccggctgcgaccgctc
gtctacaccccagagctgccgggacgcgccaagctggccctcgtgctcaccggcgtgctc
atcttcgccctggcgctctttggcaatgctctggtgttctacgtggtgacccgcagcaag
gccatgcgcaccgtcaccaacatctttatctgctccttggcgctcagtgacctgctcatc
accttcttctgcattcccgtcaccatgctccagaacatttccgacaactggctgggggaa
ctaatcacgcacctcagggagcgccatcgtcactcctattcaaacacccagagatacccc
ctacagcaggaagaaaagcctattgaggagccactacatgggcagcatcccttggaagcc
agtgatttcagagcacaagtatcagcacctcaccaaggtggaggaaggagaggccagtct
accctcccctgccagtccctgtcatcggccattgacagtgtggacaagctcccagtggtg
aaggctaaagctacccatgtcgtcatgaattatgtgatcacaaaacagacccaggaaagc
tttcagcattttgggcaacaggcagggctgagagatcctggctacacacccacaagggtg
tcaccactcagaagaccaaccttacctggcccaaatcctagcaccatggactctggaagt
ggggataaggacagaaacttgtcagataagtggggcctctttggactgagatcccttcag
aagtatgattctggaagttttgccacccaggcctaccgaggagcccagaagccctctcca
atggaactgatccgtgcccaggccaaccgaatggctgaagatccagcagccttgaagcca
cccaagatggacttcccagtgacggaagggaggaaacagccaccacgggcacataatctc
aaaccccgattgacaaatgttcacaaacatcaagaaaatatgacttcaccaaatgaacta
aataaggcaccagtgaccagtcctggagtgacagagatttgtgacctttcagacagggaa
ttcaaaataactgttctgaggaagctcaaagaagctcaagataacacagagaaggaattc
agaattgtatcagagaaatttaacaaagagattgaaataattttttaa

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_6|167_aa
MYGSAWMSRQKFAAGVGLSWRISARAMWKENVGLKPPHRVPTGAQPSGAVRRRPPSSRPQ
NGRSTDSLHHAPGKAAETQCQLMKAARREAVPGKATRAELSKTVETHLLHQHDLDVRHGV
KGNHFGHLRFDCPTGFWTFMGLVATLFWPVSHIWNGCIYSMLVLHCI

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_6|504_bp
atgtatggaagtgcctggatgtccaggcagaagtttgctgcaggggtggggctctcatgg
agaatttctgctagggcaatgtggaaggaaaatgtggggttgaagcccccacacagagtc
cctactggagcacaacctagtggagctgtgagaaggaggccaccatcctccagaccccag
aatggtagatccactgacagcttgcatcatgcacctggaaaagctgcagaaactcaatgc
cagctcatgaaagcagcccggagggaggctgtacctggcaaagccacgagggcagagctg
tccaagaccgtggaaacccacctcttgcatcagcatgacctggatgtgagacatggagtc
aaaggaaatcattttggacatttaagatttgactgccccactggattttggactttcatg
gggcttgtagccacgttattttggccagtgtctcacatttggaatggctgtatttactca
atgcttgtactccactgtatctag

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_7|79_aa
MRAAAAAMSRESLPSGHMHVFCGLAAGESGIAVSDNSYWQTAESTCFGPRQQLQWQQKET
GKRLGEDLEREILWNTELW

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_7|240_bp
atgagggcagcagcagcagcaatgagcagggaaagccttccctcagggcacatgcatgtt
ttctgtggccttgctgctggggagagtggaattgctgtcagtgacaacagctattggcag
acagctgagagcacctgctttggccctaggcagcagttgcagtggcagcagaaagaaacg
ggaaagaggctaggagaagacctagaaagagagatcctctggaacaccgagctgtggtga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_8|153_aa
MRRKQHKKAENSKNQNASSPGKDHNSSPAMSLKMENEFDELSEEGFRRWVITISSELKEH
VLTQCKEAKNLEKMLDELLTRITSVEKNINDLVEQKDTARELCEAYTSFNSQINQAEERI
SVIEYQLNEIKREEKIREKRIKRNKASKKYGTM

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_8|462_bp
atgaggagaaagcagcacaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ggaaaggatcacaactcctcaccagcaatgagtttgaagatggagaatgagtttgacgaa
ttgtcagaagaaggcttcagaagatgggtaataacaatctcctccgagctaaaggaacat
gttctaacccaatgcaaggaagctaagaaccttgaaaaaatgttagatgaattgctaact
agaataaccagtgtagaaaagaacataaatgacctggtggagcagaaagacacagcaaga
gaactttgtgaagcatacacaagttttaatagccaaatcaatcaagcagaagaaaggata
tcagtgattgaatatcaacttaatgaaataaagagagaagagaaaattagagaaaaaaga
ataaaaaggaacaaagcctccaagaaatatgggactatgtga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_9|74_aa
MSSTFISNNTAIQELFKRILEQLTVIRRCKASLHWYMGEGMNEMDEYIEAESNMNDLVPK
YQQYQDAMAKEDRV

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_9|225_bp
atgtcctccaccttcatcagcaacaacacagccatccaggagctgtttaagcgcatcttg
gagcagctcactgtcatacgcaggtgcaaggcctccctgcactggtacatgggtgagggc
atgaatgagatggatgagtacattgaggctgagagcaacatgaatgacctggtgcccaag
taccaacagtaccaggatgccatggccaaggaagacagagtttga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_10|107_aa
MEESRSGTVREGGVTTESRDQKYRFEDATLLALKMEERATSQRVQMVSTNWKSYLVESVS
CASLVLGNGALEVNGQSVGIVPAYGKGGAPFLSYTVSTRAHRSSTVH

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_10|324_bp
atggaagaaagcaggagtggcacagtcagagaaggaggtgtgacaacagaaagcagagat
cagaaatacagatttgaagatgctaccctgctggccctgaaaatggaggaaagggccaca
agccaaagagtacagatggtctctactaactggaaaagttacctggtagaatctgtttcc
tgtgccagccttgtgttgggcaatggtgctttggaagttaatggacagtcagtgggcatt
gtgcctgcttatgggaagggtggtgcacccttcctgtcctacactgtctccaccagggcc
cacagaagcagcacagttcattga

>gi568815594r:121229317_121480647|GENSCAN_predicted_peptide_11|79_aa
MLVSGTSLATVQQSTKWALGVPKSRPGLLDSMSGPFLGQRRAHCPEGLIQSIWDEGGTKL
NGSNKLPSNAKAAGSLIAL

>gi568815594r:121229317_121480647|GENSCAN_predicted_CDS_11|240_bp
atgctggtttcaggtaccagcttagccacagtgcagcagagcaccaagtgggctcttggg
gtccccaagtccaggcctgggctcttggacagcatgtctggacctttcctgggccagagg
agagcccactgccctgaaggactaattcagtccatttgggatgagggtggaacaaaactg
aatggttctaacaagcttccaagtaatgccaaagctgctggttctctgattgcactttga