Result of FASTA (omim) for pF1KB7627
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7627, 297 aa
  1>>>pF1KB7627 297 - 297 aa - 297 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8511+/-0.000346; mu= 13.8808+/- 0.022
 mean_var=109.9217+/-22.006, 0's: 0 Z-trim(118.2): 101  B-trim: 52 in 1/53
 Lambda= 0.122330
 statistics sampled from 30724 (30840) to 30724 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.362), width:  16
 Scan time:  7.910

The best scores are:                                      opt bits E(85289)
NP_068555 (OMIM: 300276) tumor necrosis factor rec ( 297) 2092 379.6  4e-105
NP_001186616 (OMIM: 300276) tumor necrosis factor  ( 297) 2092 379.6  4e-105
NP_001311135 (OMIM: 300276) tumor necrosis factor  ( 299) 2078 377.1 2.2e-104
XP_016885193 (OMIM: 300276) PREDICTED: tumor necro ( 231) 1467 269.2 5.4e-72
NP_001229239 (OMIM: 300276) tumor necrosis factor  ( 318) 1288 237.7 2.2e-62
XP_011529303 (OMIM: 300276) PREDICTED: tumor necro ( 318) 1283 236.9   4e-62
XP_011529302 (OMIM: 300276) PREDICTED: tumor necro ( 318) 1283 236.9   4e-62
XP_011529306 (OMIM: 300276) PREDICTED: tumor necro ( 191) 1273 234.9 9.5e-62
XP_011529304 (OMIM: 300276) PREDICTED: tumor necro ( 252) 1273 235.0 1.2e-61
XP_016885195 (OMIM: 300276) PREDICTED: tumor necro ( 198) 1269 234.2 1.6e-61
NP_001311130 (OMIM: 300276) tumor necrosis factor  ( 265) 1166 216.1 5.8e-56
XP_016885192 (OMIM: 300276) PREDICTED: tumor necro ( 265) 1161 215.3 1.1e-55
XP_011529308 (OMIM: 300276) PREDICTED: tumor necro ( 170) 1067 198.5 7.7e-51
XP_011529309 (OMIM: 300276) PREDICTED: tumor necro ( 144) 1054 196.1 3.3e-50
XP_011529307 (OMIM: 300276) PREDICTED: tumor necro ( 173)  836 157.7 1.5e-38
NP_001311128 (OMIM: 300276) tumor necrosis factor  ( 173)  836 157.7 1.5e-38
XP_011529305 (OMIM: 300276) PREDICTED: tumor necro ( 238)  836 157.9 1.8e-38
XP_016885196 (OMIM: 300276) PREDICTED: tumor necro ( 194)  827 156.2 4.8e-38
XP_016885194 (OMIM: 300276) PREDICTED: tumor necro ( 219)  827 156.2 5.2e-38
XP_005266503 (OMIM: 606122) PREDICTED: tumor necro ( 328)  664 127.6 3.2e-29
XP_016876141 (OMIM: 606122) PREDICTED: tumor necro ( 328)  664 127.6 3.2e-29
NP_001191387 (OMIM: 606122) tumor necrosis factor  ( 417)  661 127.2 5.4e-29
NP_683760 (OMIM: 606122) tumor necrosis factor rec ( 417)  661 127.2 5.4e-29
XP_011533448 (OMIM: 606122) PREDICTED: tumor necro ( 423)  661 127.2 5.5e-29
NP_061117 (OMIM: 606122) tumor necrosis factor rec ( 423)  661 127.2 5.5e-29
XP_016876140 (OMIM: 606122) PREDICTED: tumor necro ( 423)  661 127.2 5.5e-29
XP_005266502 (OMIM: 606122) PREDICTED: tumor necro ( 423)  661 127.2 5.5e-29
NP_001311134 (OMIM: 300276) tumor necrosis factor  ( 132)  572 111.0 1.3e-24
NP_001311133 (OMIM: 300276) tumor necrosis factor  ( 134)  558 108.6 7.1e-24
NP_071731 (OMIM: 129490,224900,604095,612630) tumo ( 448)  250 54.7 3.9e-07
XP_006712267 (OMIM: 129490,224900,604095,612630) P ( 480)  250 54.7 4.1e-07
XP_011508805 (OMIM: 129490,224900,604095,612630) P ( 496)  250 54.7 4.2e-07
XP_011508804 (OMIM: 129490,224900,604095,612630) P ( 528)  250 54.8 4.4e-07
XP_016885197 (OMIM: 300276) PREDICTED: tumor necro ( 107)  216 48.1   9e-06
NP_001311131 (OMIM: 300276) tumor necrosis factor  ( 107)  216 48.1   9e-06
NP_116260 (OMIM: 611211) tumor necrosis factor rec ( 430)  203 46.4 0.00012
NP_689408 (OMIM: 611211) tumor necrosis factor rec ( 430)  203 46.4 0.00012
NP_001233 (OMIM: 186711,615122) CD27 antigen precu ( 260)  181 42.3  0.0012
XP_006710681 (OMIM: 602250) PREDICTED: tumor necro ( 239)  179 41.9  0.0015
XP_016875723 (OMIM: 186711,615122) PREDICTED: CD27 ( 358)  181 42.4  0.0015
XP_011539688 (OMIM: 602250) PREDICTED: tumor necro ( 255)  179 41.9  0.0015
NP_001552 (OMIM: 602250) tumor necrosis factor rec ( 255)  179 41.9  0.0015
XP_016875721 (OMIM: 186711,615122) PREDICTED: CD27 ( 405)  181 42.5  0.0017
NP_001056 (OMIM: 142680,191190,614810) tumor necro ( 455)  181 42.5  0.0018
NP_001307548 (OMIM: 134637,601859) tumor necrosis  ( 197)  173 40.8  0.0027
NP_690611 (OMIM: 134637,601859) tumor necrosis fac ( 220)  173 40.8  0.0029
NP_690610 (OMIM: 134637,601859) tumor necrosis fac ( 314)  173 41.0  0.0037
NP_000034 (OMIM: 134637,601859) tumor necrosis fac ( 335)  173 41.0  0.0039
XP_011538069 (OMIM: 134637,601859) PREDICTED: tumo ( 350)  173 41.0   0.004
XP_011538068 (OMIM: 134637,601859) PREDICTED: tumo ( 362)  173 41.0  0.0041


>>NP_068555 (OMIM: 300276) tumor necrosis factor recepto  (297 aa)
 initn: 2092 init1: 2092 opt: 2092  Z-score: 2008.3  bits: 379.6 E(85289): 4e-105
Smith-Waterman score: 2092; 99.7% identity (100.0% similar) in 297 aa overlap (1-297:1-297)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_068 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
              190       200       210       220       230       240

              250       260       270       280       290       
pF1KB7 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
              250       260       270       280       290       

>>NP_001186616 (OMIM: 300276) tumor necrosis factor rece  (297 aa)
 initn: 2092 init1: 2092 opt: 2092  Z-score: 2008.3  bits: 379.6 E(85289): 4e-105
Smith-Waterman score: 2092; 99.7% identity (100.0% similar) in 297 aa overlap (1-297:1-297)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
              190       200       210       220       230       240

              250       260       270       280       290       
pF1KB7 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
              250       260       270       280       290       

>>NP_001311135 (OMIM: 300276) tumor necrosis factor rece  (299 aa)
 initn: 2078 init1: 1265 opt: 2078  Z-score: 1994.9  bits: 377.1 E(85289): 2.2e-104
Smith-Waterman score: 2078; 99.0% identity (99.3% similar) in 299 aa overlap (1-297:1-299)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQR--GGLLQF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::  ::::::
NP_001 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRVAGGLLQF
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KB7 EADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMAS
              190       200       210       220       230       240

      240       250       260       270       280       290       
pF1KB7 CTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTVESTGDRLELNVPFEVPSP
              250       260       270       280       290         

>>XP_016885193 (OMIM: 300276) PREDICTED: tumor necrosis   (231 aa)
 initn: 1467 init1: 1467 opt: 1467  Z-score: 1413.5  bits: 269.2 E(85289): 5.4e-72
Smith-Waterman score: 1467; 99.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
       :::::::::::::::::::::::::                                   
XP_016 DKTAKEESLFPVPPSKETSAESQVSWAPGSLAQLFSLDSVPIPQQQQGPEM         
              190       200       210       220       230          

>>NP_001229239 (OMIM: 300276) tumor necrosis factor rece  (318 aa)
 initn: 2078 init1: 1265 opt: 1288  Z-score: 1241.0  bits: 237.7 E(85289): 2.2e-62
Smith-Waterman score: 2040; 93.1% identity (93.4% similar) in 318 aa overlap (1-297:1-318)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
NP_001 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQR--------
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
NP_001 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQREKLIIFSD
              130       140       150       160       170       180

                         180       190       200       210         
pF1KB7 -------------GGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
                    :::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVPASLNLIPEFAGGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KB7 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
              250       260       270       280       290       300

     280       290       
pF1KB7 ESTGDRLELNVPFEVPSP
       ::::::::::::::::::
NP_001 ESTGDRLELNVPFEVPSP
              310        

>>XP_011529303 (OMIM: 300276) PREDICTED: tumor necrosis   (318 aa)
 initn: 2073 init1: 1260 opt: 1283  Z-score: 1236.3  bits: 236.9 E(85289): 4e-62
Smith-Waterman score: 2035; 92.8% identity (93.4% similar) in 318 aa overlap (1-297:1-318)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQR--------
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::        
XP_011 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQREKLIIFSD
              130       140       150       160       170       180

                         180       190       200       210         
pF1KB7 -------------GGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
                    :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPASLNLIPEFAGGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KB7 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
              250       260       270       280       290       300

     280       290       
pF1KB7 ESTGDRLELNVPFEVPSP
       ::::::::::::::::::
XP_011 ESTGDRLELNVPFEVPSP
              310        

>>XP_011529302 (OMIM: 300276) PREDICTED: tumor necrosis   (318 aa)
 initn: 2073 init1: 1260 opt: 1283  Z-score: 1236.3  bits: 236.9 E(85289): 4e-62
Smith-Waterman score: 2035; 92.8% identity (93.4% similar) in 318 aa overlap (1-297:1-318)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQR--------
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::        
XP_011 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQREKLIIFSD
              130       140       150       160       170       180

                         180       190       200       210         
pF1KB7 -------------GGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
                    :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVPASLNLIPEFAGGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KB7 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
              250       260       270       280       290       300

     280       290       
pF1KB7 ESTGDRLELNVPFEVPSP
       ::::::::::::::::::
XP_011 ESTGDRLELNVPFEVPSP
              310        

>>XP_011529306 (OMIM: 300276) PREDICTED: tumor necrosis   (191 aa)
 initn: 1260 init1: 1260 opt: 1273  Z-score: 1229.6  bits: 234.9 E(85289): 9.5e-62
Smith-Waterman score: 1273; 91.6% identity (95.3% similar) in 191 aa overlap (1-191:1-190)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::  :. : .
XP_011 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQREKLIIF-S
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KB7 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
       : .    .:.:                                                 
XP_011 DPVPASLNLIPE                                                
     180       190                                                 

>>XP_011529304 (OMIM: 300276) PREDICTED: tumor necrosis   (252 aa)
 initn: 1453 init1: 1260 opt: 1273  Z-score: 1228.0  bits: 235.0 E(85289): 1.2e-61
Smith-Waterman score: 1415; 89.8% identity (90.7% similar) in 226 aa overlap (1-205:1-226)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_011 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQR--------
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::        
XP_011 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQREKLIIFSD
              130       140       150       160       170       180

                         180       190       200       210         
pF1KB7 -------------GGLLQFEADKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILE
                    :::::::::::::::::::::::::::::::::              
XP_011 PVPASLNLIPEFAGGLLQFEADKTAKEESLFPVPPSKETSAESQVSWAPGSLAQLFSLDS
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KB7 DDCSSTSGFPTQESFTMASCTSESHSHWVHSPIECTELDLQKFSSSASYTGAETLGGNTV
                                                                   
XP_011 VPIPQQQQGPEM                                                
              250                                                  

>>XP_016885195 (OMIM: 300276) PREDICTED: tumor necrosis   (198 aa)
 initn: 1309 init1: 1269 opt: 1269  Z-score: 1225.6  bits: 234.2 E(85289): 1.6e-61
Smith-Waterman score: 1269; 98.3% identity (99.4% similar) in 175 aa overlap (1-175:1-175)

               10        20        30        40        50        60
pF1KB7 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHKCQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
XP_016 MDCQENEYWDQWGRCVTCQRCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CITCAVINRVQKVNCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 QLSLVEADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGGLLQFEA
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::: :     
XP_016 QLSLVEADTPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFNRHCQRGLLGPWQP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DKTAKEESLFPVPPSKETSAESQVSENIFQTQPLNPILEDDCSSTSGFPTQESFTMASCT
                                                                   
XP_016 CPVVLSGLCSYTTTAAGA                                          
              190                                                  




297 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 18:28:20 2016 done: Sat Nov  5 18:28:21 2016
 Total Scan time:  7.910 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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