GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:21:56

Sequence gi568815592r:88998581_89217887 : 219307 bp : 42.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2871   3148  278  0  2   79   68   130 0.632   6.34
 1.02 Term +  10502  10527   26  0  2  110   47    21 0.070  -2.39
 1.03 PlyA +  11676  11681    6                               1.05

 2.00 Prom +  38419  38458   40                              -2.35
 2.01 Init +  43366  43368    3  0  0   73  103     0 0.610   0.05
 2.02 Intr +  47038  47145  108  0  0   63   64    90 0.797   3.66
 2.03 Intr +  51236  51352  117  1  0  102    9   143 0.073   7.54
 2.04 Intr +  66589  66762  174  0  0   42   66   121 0.068   4.51
 2.05 Term +  67408  67644  237  0  0   19   48   235 0.071   7.78
 2.06 PlyA +  69412  69417    6                               1.05

 3.00 Prom +  77016  77055   40                              -5.35
 3.01 Init +  77820  77880   61  2  1   63   73    52 0.264   2.67
 3.02 Intr +  82217  82393  177  0  0   57   17   130 0.547   1.77
 3.03 Intr +  82499  82854  356  0  2  120   78   206 0.524  16.88
 3.04 Term +  85173  85616  444  2  0  102   33   224 0.998  12.55
 3.05 PlyA +  89102  89107    6                               1.05

 4.06 PlyA -  91058  91053    6                               1.05
 4.05 Term - 100367 100207  161  0  2   69   49   121 0.084   3.42
 4.04 Intr - 106634 106539   96  0  0   12   70   133 0.592   2.96
 4.03 Intr - 106958 106847  112  2  1   53  106   150 0.977  12.33
 4.02 Intr - 108211 108101  111  1  0   38   76    85 0.599   1.96
 4.01 Init - 109079 109068   12  2  0   53   60    -6 0.162  -6.44
 4.00 Prom - 110238 110199   40                              -7.05

 5.00 Prom + 110986 111025   40                              -3.95
 5.01 Init + 114380 114390   11  1  2   60   91    16 0.317  -2.33
 5.02 Intr + 119229 119754  526  0  1   68   44   254 0.457  11.02
 5.03 Intr + 120345 120461  117  2  0   69   54   133 0.200   7.74
 5.04 Term + 142075 142317  243  0  0   76   38   175 0.410   6.22
 5.05 PlyA + 145062 145067    6                               1.05

 6.00 Prom + 145676 145715   40                              -2.95
 6.01 Init + 147565 148029  465  0  0   93  100   425 0.599  39.89
 6.02 Intr + 150685 150833  149  0  2   82   61   166 0.961  11.41
 6.03 Intr + 154463 154605  143  2  2   82   60    82 0.950   3.88
 6.04 Intr + 156168 156322  155  1  2   76   61    72 0.934   2.17
 6.05 Intr + 159745 159880  136  0  1   63   91    73 0.948   4.32
 6.06 Intr + 162848 163054  207  0  0  -19  105   117 0.593   0.83
 6.07 Intr + 163203 163310  108  1  0   61  119   143 0.999  14.04
 6.08 Term + 163529 163683  155  0  2   74   42   228 0.998  13.90
 6.09 PlyA + 166165 166170    6                               1.05

 7.11 PlyA - 166281 166276    6                               1.05
 7.10 Term - 179983 179867  117  1  0   32   41   100 0.740  -2.74
 7.09 Intr - 180483 180295  189  0  0   86   47   155 0.952  10.06
 7.08 Intr - 181908 181712  197  1  2  103   57   302 0.992  26.81
 7.07 Intr - 183477 183325  153  1  0  108   82    44 0.951   4.92
 7.06 Intr - 186870 186730  141  1  0   99  111   144 0.999  17.20
 7.05 Intr - 191667 191585   83  2  2   99   68    51 0.469   2.56
 7.04 Intr - 199663 199440  224  1  2  112   91   262 0.814  24.90
 7.03 Intr - 200849 200782   68  0  2   89  115    84 0.902   8.91
 7.02 Intr - 202685 202579  107  1  2   94   64    80 0.483   5.14
 7.01 Init - 204653 204532  122  2  2   55   43    95 0.310   1.41
 7.00 Prom - 206584 206545   40                              -6.15

 8.00 Prom + 206599 206638   40                              -7.75
 8.01 Init + 209420 209530  111  1  0   39   73   114 0.251   5.39
 8.02 Term + 213463 213669  207  0  0   40   48   181 0.189   5.66
 8.03 PlyA + 213897 213902    6                               1.05

 9.03 PlyA - 214086 214081    6                               1.05
 9.02 Term - 215549 215380  170  0  2   78   39   148 0.977   5.96
 9.01 Init - 217723 217528  196  1  1   49   89    69 0.657   2.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  67751  67661   91  2  1   78  101    69 0.815   7.90
S.002 Sngl - 100381  99998  384  1  0   51   47   205 0.808   8.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_1|101_aa
XVSVNAMTHGDQLELTQQKIWKSRATHLRESTKMTSFLMPPASRGTQRSCSKSRKRQMRR
RNPSSFVASCATLLPFTSVPASAAGPFRASFPSATNSAFGV

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_1|306_bp
nnggtgtcagtcaatgccatgacccatggtgaccagcttgagctcacccagcagaaaata
tggaaaagcagagcaactcatttaagagaaagcaccaagatgaccagctttctgatgcca
cctgcaagtagagggactcagagatcatgcagcaaaagcagaaaaaggcaaatgagaagg
agaaacccaagtagctttgtggcttcatgcgcaaccctcctgccattcaccagtgtccct
gcatctgcagcaggtccctttcgtgcttccttcccctcagccaccaactcagcttttggt
gtgtga

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_2|212_aa
MAFVSLCEKHGPEVPSSSRCPCSSNEDVKPWRWKSMMVLAEQHAEAYVLPTTITNLDVVV
EAMSLMRSLKMSGKNKTHRNPWRRGKAQAWRAAARASPTNAAPCSRAPSPIDRPRAEECE
CMAQDWQAAPPTAPVCSFTPEASETTSPPGGTNNSRRAALRAVTLTAKVCSFTPEPARLR
THQKEETPNTSEHQKEQTPDATFGVNKLQTPP

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_2|639_bp
atggcttttgtgtccctgtgtgagaaacatggaccagaagtgccatcaagttctcgctgt
ccctgttcttcaaatgaggacgtgaagccatggagatggaaaagtatgatggtgcttgca
gaacagcacgcagaagcttatgtactgcccacaacaatcaccaacttggacgtggtagtt
gaagcaatgagtcttatgaggtccctcaagatgagcgggaagaacaaaactcacaggaac
ccatggaggcgggggaaggctcaggcatggcgggctgcagcccgagcctccccgacaaat
gccgccccctgctccagggcgcccagtcccatcgaccgcccaagggctgaggagtgcgag
tgcatggcgcaggactggcaggcagctccacctacagccccggtctgcagcttcactcct
gaagccagtgaaaccacgagcccaccaggaggaacgaacaactccagacgcgccgcctta
agagctgtaacactcactgcgaaggtctgtagcttcactcctgaaccagcgagactacga
acccaccagaaggaagaaactccgaacacatccgaacatcagaaggaacaaactccagac
gcgacctttggagttaacaaactccaaactccaccttaa

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_3|345_aa
MRQLGRMRCENLLNARGGGCSSPSSIHRRHPIFTGFIHLLLLSSLLSDKLPSAMTVVSVP
QREPLVLGGRLAPLGFSSRGGDGPCLTPQPRAPAALPNRSLAVAGGTPRAAPKKRRKKKV
RASPAGQLPSRFHQYQQHRPSLEGGRSPATGPSGAQEVPGPAAALAPSPAAAAGTEGASP
DLAPLRPAAPGQTPLRKEVLKSKMGKSEKIALPHGQLVHGIHLYEQPKINRQKSKYNLPL
TKITSAKRNENNFWQDSVSSDRIQKQEKKPFKNTENIKNSHLKKSAFLTEVSQKENYAGA
KFSDPPSPSVLPKPPSHWMGSTVENSNQNRELMAVHLKTLLKVQT

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_3|1038_bp
atgcgccagctagggaggatgaggtgtgagaatctcctgaacgccagaggtggaggctgc
agctctcctagcagcatccatcgccgccaccctatcttcactggcttcattcaccttctc
cttctctcttcgttgctgagcgacaagcttcctagcgctatgactgtcgtctccgtcccg
cagcgggagccgctcgtcctgggtggccgccttgcgccgcttggcttttcctcccgaggg
ggagatggcccgtgtctgaccccccagcctcgcgctccagcagctctgcccaaccgcagc
ctcgccgtggcgggaggcactcctcgggcagcgccgaagaagcggcgaaagaagaaggtg
cgggccagccccgcagggcagctgcccagccgcttccaccagtaccagcagcaccggccg
agtctggagggcggccggagccccgcgaccggcccgagcggagcgcaggaggtcccgggc
ccggccgccgccttggccccgagtcctgcagccgcagccggcacggagggagccagcccc
gaccttgccccgctgcggcccgcggctcccggccaaacccccctcaggaaagaggtttta
aaatcaaagatgggaaaatcggagaaaattgcccttccccatggccagcttgttcatggt
atacacttgtatgagcaaccaaagataaacagacagaaaagcaaatataacttgccacta
accaagatcacctctgcaaaaagaaatgaaaacaacttttggcaggattctgtttcatct
gacagaattcagaagcaggaaaaaaagccttttaaaaataccgagaacattaaaaattcg
catttgaagaaatcagcatttctaactgaagtgagccaaaaggaaaattatgctggggca
aagtttagtgatccaccttctcctagtgttcttccaaagcctcctagtcactggatggga
agcactgttgaaaattccaaccaaaacagggagctgatggcagtacacttaaaaacgctc
ctcaaagttcaaacttag

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_4|163_aa
MLTQSSRVKAKSDFVGSASLIKSILQALKSKGQGSRSSDIELVIFEDVRDAEDALYNLNR
KWVCGRQIEIQFAQGDRKMITGDQEAPAKEELEVEVLHGEEIGGGQTALKSLDTGDFLIA
SLNLVPNHYQGGLPQQGSQELQEGILALEDGQGPSPYKRGPSQ

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_4|492_bp
atgctcactcagagttccagagtcaaagccaagtctgattttgttggttctgcgtctctt
ataaagtccatcttgcaagccttaaagagtaaaggtcaaggttcaagatcaagtgacatt
gagctagtcatatttgaagatgttcgagatgctgaagatgctctttataacctcaataga
aagtgggtatgtggccgtcagattgaaatacagtttgcacaaggtgatcgcaaaatgatc
acaggagatcaagaagccccagccaaagaagaactcgaagtagaagttcttcatggggaa
gaaataggaggcggtcagacagccttaaagagtctcgacacaggcgattttcttatagcc
agtctaaatctcgttccaaatcattaccaaggcggtctacctcagcaaggcagtcaagaa
ctccaagaaggaattttggctctagaggacggtcaaggtccaagtccttacaaaagaggt
ccaagtcaatag

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_5|298_aa
MLYSRGRSPGGVRDVPDEQGGVGGPRVARHDRFLRSLRVCPRPLDSLRLPLPLLPPQELR
RPPARPPPLGLSPASAQPQRPAQRGRSAAPAWTHGPGAGAAPARPRGRGNSEDRSAAVPR
PYGIRVWGVLECDGIWGGGGEGQCMSGGRRPRGGLRPRRGRRGLEDPEVVAGLRLGGGGL
DSSSPCSCGRQAQPVIQGWECNQATPKCEECPFSLAEVCCFVHTVGNQGKGKAYPLRTSL
SSFPGIVMENRAANLTAKRREAKGSLRSSGTRTFRALKSLPSLCGPFEEIRTELENEL

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_5|897_bp
atgctgtacagccgcggccgttcacctggtggcgtccgcgacgttcctgatgaacaggga
ggtgttggggggcctcgtgtagcgagacatgaccgcttcctccgttccctccgggtctgc
ccgcggccgctggactcgctccgtctcccgctaccgctgctaccaccacaggagctccgc
cggcccccggcgcgacccccacccctcggcctcagccccgccagcgcgcagccgcagagg
ccggcgcagagggggcgcagcgcggcgccagcctggacgcacgggccgggggcgggggcg
gcgccggcgcggcccaggggccgcgggaattccgaagacaggagcgcggccgttcccagg
ccctatgggatccgggtatggggggtcctggagtgcgacgggatttggggagggggcggc
gagggccagtgtatgtcaggagggcggaggccaagagggggcttgaggccgcggcgggga
cgccgggggttagaggacccagaggtggtggcggggctgcggctgggcggaggtgggtta
gactcgtcttcgccttgctcctgtggccggcaggcacagcctgttattcagggctgggag
tgtaaccaggcaactcctaagtgtgaagagtgccccttttcgctcgcagaagtgtgttgt
tttgtacacactgtggggaatcagggcaaaggaaaagcctatcctctcagaacctccctg
tcctcatttccaggaatagtgatggagaacagagcagctaatctcactgccaagagaagg
gaagccaaagggagcctcaggtcatcaggtaccaggacattcagggctttaaagtcactg
ccttcactttgtgggccatttgaagaaatccgcacagaacttgaaaacgagttgtaa

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_6|505_aa
MRPGGERPVEGGACNGRSELELLKLRSAECIDEAAERLGALSRAIWSQPELAYEEHHAHR
VLTHFFEREPPAASWAVQPHYQLPTAFRAEWEPPEARAPSATPRPLHLGFLCEYDALPGI
GHACGHNLIAEVGAAAALGVRGALEGLPRPPPPVKVVVLGTPAEEDGGGKIDLIEAGAFT
NLDVVFMAHPSQENAAYLPDMAEHDVTVKYYGKASHSASYPWEGLNALDAAVLAYNNLSV
FRQQMKPTWRVHGIIKNGGVKPNIIPSYSELIYYFRAPSMKELQVLTKKAEDCFRAAALA
SGCTVEIKGGAHDYYNVLPNKSLWKAYMENGRKLGIEFISEDTMLNGPSERQKKGPSERQ
KGSHASAVSQKRRKGVGGSVECWPRGPVKAVRQGEGRFAVTFMRDVTDTGEWVADSVEGS
TDFGNVSFVVPGIHPYFHIGSNALNHTEQYTEAAGSQEAQFYTLRTAKALAMTALDVIFK
PELLEGIREDFKLKLQEEQFVNAVE

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_6|1518_bp
atgaggcccggaggggagcggcccgtggaagggggcgcgtgcaatggccgctccgagctg
gagctactgaagctgcgctcggcggagtgcatcgacgaggcggccgagcggctgggggcc
ctgagccgcgcgatctggagccagcccgagctggcctacgaggagcaccatgcccaccgc
gtgctgacgcacttcttcgagcgggagccgcccgcggcctcctgggcagtgcagccgcac
taccagctgcccacggccttccgcgccgagtgggagccgccggaggcccgggcaccgagc
gccacgccacgcccgctgcacctgggcttcctctgcgagtacgacgcgctgcccggcatc
ggccacgcctgcggccacaacctcatcgctgaggtcggggcggcggccgcgctgggcgtg
aggggggccttagagggcctccccaggccgcctccgcccgtgaaggtagttgtcctggga
acccctgcagaagaagatggtggtggcaaaattgatttaattgaagcaggggcttttaca
aatcttgatgttgtttttatggcccacccatcacaagagaatgctgcttatctaccagat
atggctgaacatgatgtgactgtgaaatactatggaaaagcatctcattctgcttcttat
ccctgggaaggattaaatgcattagatgctgctgtgctggcctataacaatctgtctgtg
ttcagacagcaaatgaaaccaacctggagagttcatggtataataaaaaatggtggtgta
aaacccaatatcattccctcttattctgaattaatctattacttccgtgcaccctcaatg
aaagaacttcaagttttgaccaaaaaggcagaagattgcttcagagctgcagctttggct
tcagggtgcacagtggaaattaaaggtggagcacatgattattacaatgttcttcccaat
aagagcctatggaaagcctatatggaaaatggaagaaagctaggaatagagttcatttca
gaagatacaatgttgaatggcccttcagagagacagaagaaggggccatcagagaggcag
aagggaagccatgcaagtgctgtgtcacagaagagaagaaagggagtaggtggcagtgtg
gagtgctggccaagagggccagtaaaagccgtgagacaaggtgagggcaggtttgcagtg
accttcatgagagatgtgactgatacaggggagtgggtggcagactcagtggaaggatct
acggattttggaaatgttagttttgtggttcctggaattcatccatattttcacattgga
tctaatgccttgaatcatactgaacagtacactgaagctgctgggtcacaggaagctcag
ttctacactctgcggacggccaaagctctggcaatgacggcactggatgttatttttaaa
ccagagttactggaaggaatcagagaggactttaaactgaaacttcaagaagaacagttt
gtaaatgcagtagaataa

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_7|466_aa
MSAAMGAGVPPLDKPGFLPYICKQLTGSNSFPGPPPLLPARPILRRSPDITKSPLTKSEQ
LLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS
TNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM
CNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTT
KLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQ
KLREKLPCTSGLPPPRTAMLDGNYSDGEVNDLDNYMPENGEKPDRMMVQLTLASERSSPQ
RKSQRSSYHYIRCCRKYDTVATDVSCYPDPLEKHTTSVVGTFSSTR

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_7|1401_bp
atgtccgcggcaatgggagctggtgttcctcctcttgacaagcccggcttcctcccttat
atctgtaagcagctcactggttccaattctttccctgggccacctcctttgctgccagca
cgcccaattctgagacgaagtcctgacatcaccaaatcgcctctgacaaagtcagaacag
cttctgaggatagatgaccatgatttcagcatgaggcctggctttggaggccctgccatt
cctgttggtgtggatgtgcaggtggagagtttggatagcatctcagaggttgacatggac
tttacgatgaccctctacctgaggcactactggaaggacgagaggctgtcttttccaagc
accaacaacctcagcatgacgtttgacggccggctggtcaagaagatctgggtccctgac
atgtttttcgtgcactccaaacgctccttcatccacgacaccaccacagacaacgtcatg
ttgcgggtccagcctgatgggaaagtgctctatagtctcagggttacagtaactgcaatg
tgcaacatggacttcagccgatttcccttggacacacaaacgtgctctcttgaaattgaa
agctatgcctatacagaagatgacctcatgctgtactggaaaaagggcaatgactcctta
aagacagatgaacggatctcactctcccagttcctcattcaggaattccacaccaccacc
aaactggctttctacagcagcacaggctggtacaaccgtctctacattaatttcacgttg
cgtcgccacatcttcttcttcttgctccaaacttatttccccgctaccctgatggtcatg
ctgtcctgggtgtccttctggatcgaccgcagagccgtgcctgccagagtccccttaggt
atcacaacggtgctgaccatgtccaccatcatcacgggcgtgaatgcctccatgccgcgc
gtctcctacatcaaggccgtggacatctacctctgggtcagctttgtgttcgtgttcctc
tcggtgctggagtatgcggccgtcaactacctgaccactgtgcaggagaggaaggaacag
aagctgcgggagaagcttccctgcaccagcggattacctccgccccgcactgcgatgctg
gacggcaactacagtgatggggaggtgaatgacctggacaactacatgccagagaatgga
gagaagcccgacaggatgatggtgcagctgaccctggcctcagagaggagctccccacag
aggaaaagtcagagaagcagctatcattatattaggtgctgcaggaaatacgacactgta
gcgactgatgttagttgttacccagatcccctggaaaagcacactaccagtgttgtgggc
acatttagttccacccgttag

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_8|105_aa
MRWLRNLSSPFQKAAASLRCERRFAALVLLAEGDATRLSLGILQAHLGPYVHTKLITFTP
KPNPPPALLPGITIYSVVQSKDLPNIHPKLLSHPEANQILTILAP

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_8|318_bp
atgagatggcttcgaaacctttcaagtccattccagaaggcggcagcctccctgagatgt
gagaggcgcttcgctgctctagtcctgttggctgaaggcgatgctacaaggctgtctctg
ggtatcttgcaagcacatctaggtccatatgttcataccaaactcatcaccttcaccccc
aaacctaatcctccacctgctctccttcctggcatcaccatctactcagtcgtacaatcc
aaagacctgccgaacattcaccctaaacttctctctcaccctgaagccaatcagattctg
accattctagctccttga

>gi568815592r:88998581_89217887|GENSCAN_predicted_peptide_9|121_aa
MKRYLAFGSLGLGGGLCLAPQCPPSGAGGSPHHMGSQTASCSSQHLFQAVLNNITKLGAE
ISSGHVPEVLAKAVRQEKERKDIEIGKKEVKLLLFADDMILYIENPKDFTKKTVRTNEQI
Q

>gi568815592r:88998581_89217887|GENSCAN_predicted_CDS_9|366_bp
atgaaaagatatctagcttttgggagtttggggttaggaggagggctgtgtctagcacct
cagtgtcctccttctggggctggagggagccctcatcacatgggctcccaaacagccagc
tgtagctcacagcatttgtttcaagctgttcttaacaacatcacaaaactaggagctgaa
atatccagtggtcatgtaccagaagtccttgccaaagcagttagacaagagaaagaaaga
aaagacatagaaataggaaagaaagaagtgaaattgttgctgtttgctgatgacatgatc
ttatatatagaaaaccctaaagacttcaccaagaaaactgttagaactaatgaacaaata
caataa