GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:15:56

Sequence gi568815589f:89211293_89416422 : 205130 bp : 44.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1115   1143   29  1  2   83   68    94 0.301   4.08
 1.02 Intr +  10410  10564  155  0  2  127   -2    66 0.082   1.22
 1.03 Term +  15546  15682  137  1  2   63   52   103 0.711   2.38
 1.04 PlyA +  15940  15945    6                               1.05

 2.00 Prom +  25519  25558   40                              -4.46
 2.01 Init +  30242  30300   59  1  2   78  100     9 0.617   1.91
 2.02 Intr +  34777  34837   61  1  1   94   64    68 0.840   3.74
 2.03 Intr +  35201  35417  217  1  1  126   77    74 0.964   8.18
 2.04 Intr +  44009  44082   74  0  2  122   86    17 0.840   4.03
 2.05 Intr +  49772  49904  133  1  1   85   68    42 0.420   2.12
 2.06 Intr +  59496  59577   82  1  1   88   78    -2 0.002  -2.50
 2.07 Intr +  71378  71676  299  2  2   59   76   149 0.029   7.32
 2.08 Intr +  97583  97669   87  0  0   78  106    45 0.095   5.24
 2.09 Intr +  99387  99580  194  1  2   78   28   130 0.180   5.21
 2.10 Intr +  99989 100059   71  1  2   88   68   193 0.111  15.28
 2.11 Intr + 103878 104005  128  0  2   85  115    -4 0.072   2.32
 2.12 Intr + 107116 107320  205  2  1   79   94   118 0.069   9.76
 2.13 Intr + 114303 114384   82  0  1   17  113    69 0.051   1.94
 2.14 Intr + 114605 114746  142  1  1   78   98    28 0.868   2.73
 2.15 Intr + 117368 117594  227  0  2   66  100    80 0.802   4.70
 2.16 Intr + 121616 121694   79  1  1  111   83    16 0.540   2.52
 2.17 Intr + 123230 123438  209  0  2   20  102    91 0.364   2.50
 2.18 Intr + 130055 130187  133  1  1   54  110    67 0.718   5.72
 2.19 Intr + 135590 135756  167  0  2   59   95   101 0.975   7.58
 2.20 Intr + 136787 136922  136  1  1   36   81   120 0.744   6.24
 2.21 Intr + 138484 138637  154  2  1   64   64    90 0.738   3.33
 2.22 Intr + 139340 139560  221  2  2   71   98   129 0.957  10.15
 2.23 Intr + 146119 146273  155  2  2   78  109   136 0.998  14.49
 2.24 Intr + 146707 146899  193  0  1   60   79   137 0.906   9.07
 2.25 Term + 147429 147532  104  1  2   98   54    27 0.706  -1.26
 2.26 PlyA + 148331 148336    6                               1.05

 3.21 PlyA - 149521 149516    6                               1.05
 3.20 Term - 150459 150304  156  0  0   62   47    59 0.278  -2.87
 3.19 Intr - 152235 152138   98  1  2   80  106    42 0.912   4.93
 3.18 Intr - 152658 152449  210  1  0   61  119   178 0.848  17.08
 3.17 Intr - 161669 161502  168  0  0   73   94    32 0.159   2.22
 3.16 Intr - 165657 165541  117  1  0   41  109   121 0.181   9.94
 3.15 Intr - 168337 167453  885  2  0   74   39   964 0.048  81.40
 3.14 Intr - 169806 169763   44  2  2   97  100    37 0.998   3.68
 3.13 Intr - 170054 169882  173  2  2   86   80   256 0.990  23.34
 3.12 Intr - 171488 171291  198  2  0   68   40   110 0.744   3.75
 3.11 Intr - 173696 173592  105  2  0   91   75    49 0.939   4.31
 3.10 Intr - 175190 175075  116  0  2   72   98   206 0.794  20.17
 3.09 Intr - 176316 176094  223  0  1   67   94   370 0.722  33.20
 3.08 Intr - 177500 177344  157  1  1  102   89   244 0.932  25.91
 3.07 Intr - 177755 177580  176  2  2   72   87   243 0.998  21.34
 3.06 Intr - 180123 179972  152  1  2  100  113   278 0.999  31.38
 3.05 Intr - 181244 181101  144  0  0   97   92    13 0.561   2.85
 3.04 Intr - 182363 182270   94  2  1   87   97    84 0.998   8.74
 3.03 Intr - 185543 185445   99  2  0  109   95   113 0.999  14.41
 3.02 Intr - 191724 191579  146  1  2  117   94   252 0.993  28.70
 3.01 Init - 194158 194059  100  1  1   40  105    94 0.360   4.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  77474  77528   55  1  1   71  100    77 0.854   8.65
S.002 Term - 168337 167412  926  2  2   74   54  1044 0.946  91.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:89211293_89416422|GENSCAN_predicted_peptide_1|106_aa
MLMVRLLAVLENIIRYGFSRLLKTLKAIEHHFRFFTLMLDTREQLTSGEQTIAAAGRQLE
PREKAFLLLFIECWETVEHQNQAMPPTQRNFLVTLGIPPTWTSGLP

>gi568815589f:89211293_89416422|GENSCAN_predicted_CDS_1|321_bp
atgctgatggtccggctgcttgctgtgctggaaaacattatccgttatggtttctctagg
ctactgaagactctgaaagccatagagcatcattttaggttctttacattgatgttagat
actagagagcagctgacttcaggagaacagacaatagcagcagccggcaggcaactagag
cccagagaaaaagcctttctactgcttttcatcgagtgttgggaaacagtggagcaccag
aaccaggccatgcctcccacccagaggaatttcctggtgactctgggcatcccacctacc
tggacctctggcctaccttga

>gi568815589f:89211293_89416422|GENSCAN_predicted_peptide_2|1203_aa
MRMRPTELHSQEVKVFLVARAWNAHKKANEAGMSRKLRLGVWAMTGVLTGHEHQSTQYPA
LIMPFAKKPYPTTKPTLSLLATVSPDTPHTYLFVPITLVCDSLLPGCMDLHKGEPTTGQP
QRQRGTMRAKPAAFQVVPFHQGHQTERLKTSYALRISLTICTNTFSVPDNLKEEPTMHSY
PMLLSGFGNQDNAGFIKGVWNVSSSSIFLAPDLQPAMPEPPTPSMGSCGARVSPISAAPC
STAPSPIDHPRAEESGRRAQDWQAASPAAPVRDPVGEASWVESGGDVANLLSSSGIVNTP
IGTLYLAQGKGSSPDPKGEFLDLVQERIQGESTVQNEKPFCLLLLFKVDLGSWLEPEGIQ
GITRSAITVQGRQLPLKALWPTLPASTDYVITKPRDTSLHLQRASRMAHKQIYYSDKYFD
EHYEYRHVMLPRELSKQVPKTHLMSEEEWRRLGVQQSLGWVHYMIHEPGPVPPPRTSGRK
KGRALSLCCDALPGVACGGGNALSVRQADGPLLASVTRPPPRLAAWRRRGRGSPKASCYR
GFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH
LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQP
KWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPM
GYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP
TQKDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECAS
GERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENA
VSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEA
SHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKR
RLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNR
KALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQ
APPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQMMN
LNL

>gi568815589f:89211293_89416422|GENSCAN_predicted_CDS_2|3612_bp
atgaggatgagacctactgagctgcattcccaggaggttaaggtgttcttagtcgcaaga
gcgtggaacgctcataagaaggcaaatgaggctggcatgtccaggaagctacgactggga
gtgtgggccatgactggtgttcttacaggacatgagcatcaatcaactcaatacccagcc
ctaatcatgccttttgctaaaaagccttatcctaccaccaagccaacattgtcgcttcta
gccacagtctcccctgacactccacacacatatctctttgtgcccatcacactggtctgt
gatagtctgctccctggttgcatggacttgcacaaaggtgagcccaccacagggcagcca
cagcgacagagagggaccatgcgggcaaagccagctgcattccaagttgtacccttccat
caaggtcatcagactgaaagacttaaaacttcctacgcgctcagaatctctcttacaatc
tgtactaacacattttctgtcccggataatctaaaggaagaaccaaccatgcactcctat
cctatgctcttgtctggctttggtaaccaggataatgctggcttcataaaaggggtttgg
aatgtttcctcctcttcaatttttttggctccggacctgcagcccgccatgcctgagcct
cccaccccctccatgggctcctgtggggcccgagtctccccgataagtgccgccccctgc
tccacggcacccagtcccatcgaccacccaagggctgaggagagcgggcgcagggcgcag
gactggcaggcagcttcacctgcagccccagtgcgcgatccagtgggtgaagccagctgg
gttgagtctggtggggacgtggcgaaccttttgtctagctcagggattgtaaatacacca
atcggcactctgtacctagctcaaggaaaggggtccagtccagatcccaagggagaattc
ttggatctcgtgcaagaaagaattcagggtgagtccactgtgcaaaatgaaaaacctttc
tgccttttactacttttcaaagtggacctaggctcctggctcgagcctgaggggatacaa
gggatcacgaggagcgccatcaccgtgcaaggtcgacagcttccgctcaaagccctgtgg
cccacgcttccggcctcgaccgactacgtcatcaccaaaccccgtgatacctcactccac
cttcagcgcgccagcaggatggcccacaagcagatctactactcggacaagtacttcgac
gaacactacgagtaccggcatgttatgttacccagagaactttccaaacaagtacctaaa
actcatctgatgtctgaagaggagtggaggagacttggtgtccaacagagtctaggctgg
gttcattacatgattcatgagccaggtccagtgccgccgccgcgtacttccggccggaag
aaagggcgggctctgtcgctttgctgtgacgcacttcctggcgtcgcctgcgggggcgga
aacgctttgtctgtccggcaagccgacggcccgctgctggcctccgtgacgcggcctcct
ccgcgcctcgcggcatggcgtcggaggggccgcgggagcccgaaagcgagttgttaccga
ggttttcaaacagtgaagcatcgaaatgagaacacatgccctctcccacaagaaatgaaa
gctctgtttaagaagaaaacctatgatgagaaaaaaacgtatgatcagcaaaagtttgac
agtgaaagggctgatggaactatatcatctgagataaaatcagctagaggttcacatcat
ttgtccatttacgctgagaatagtttgaaatcagatggttaccataagcgaacagacagg
aaatccagaatcattgcaaaaaatgtatctacctccaaacctgagtttgaatttaccaca
ctggactttcctgaactgcaaggtgcagagaacaatatgtcagagatacagaagcaaccc
aagtggggacctgtccactctgtctctaccgacatttctcttctaagagaagtagtaaaa
ccagctgcagtgttatcaaagggtgaaatagtggtgaaaaataacccaaatgaatctgta
actgctaatgccgctaccaattctccttcatgtacaagagagttatcttggacaccaatg
ggttatgttgttcgacagacattatctacagaactgtcagcagcccctaaaaatgttact
tctatgataaacttaaagaccattgcttcatcagcagatcctaaaaatgttagtatacca
tcttctgaagctttatcttcggatccttcctacaacaaagaaaaacacattattcatcct
acccaaaaggataattttaaaaataatgtaaagaagagccagcttccagtgcagttggac
ttggggggcatgctgacagccctggagaagaagcagcactctcagcatgcaaagcagtcc
tccaaaccagtggtagtctcagttggagcagtgccagtcctttccaaagaatgtgcatca
ggggagagaggccgccgcatgagtcaaatgaagaccccgcacaatcccttggactccagc
gccccactgatgaagaaagggaagcagagggagatccccaaggccaagaagccaacctca
ctgaagaagattattttgaaagaacggcaagagagaaagcagcgtctccaagaaaatgct
gtgagtccagcttttaccagtgatgacacacaagatggagagagtggtggtgatgaccag
tttcccgagcaggcagagctgtcagggccagaggggatggacgaactgatctccactcct
tcggttgaggacaagtctgaagagccaccaggcacagagctccagagggacacagaggcc
tcccaccttgctcccaatcacaccaccttccctaagatccacagccgcagattcagggat
tactgcagccagatgcttagtaaagaagtggatgcttgtgttaccgacctactcaaagaa
ctggtccgtttccaagaccgtatgtaccagaaagatccagtcaaggccaagactaaacgt
cgacttgtgttggggttgagggaggttctcaaacacctgaagctcaaaaaactgaaatgt
gtcattatttctcccaactgtgagaagatacagtcaaaaggtgggctggatgacactttg
cacacaattattgattatgcctgtgagcagaacattccctttgtgtttgctctcaaccgc
aaagctctggggcgcagtttgaataaggcagttcctgtcagtgtggtggggatcttcagc
tatgatggggcccaggatcagttccacaagatggttgagctgacagtggcggcccgacag
gcgtacaagaccatgctggagaatgtgcagcaggagctggtgggagagcccaggcctcag
gcacctcccagcctacccacacagggccccagctgccctgcagaagatggccccccagcc
ctgaaagaaaaagaagagccacactacattgaaatctggaaaaaacatctggaagcatac
agtggatgtaccctggagctagaagaatccttggaggcttcaacctctcaaatgatgaat
ttgaatttatga

>gi568815589f:89211293_89416422|GENSCAN_predicted_peptide_3|1186_aa
MCTPIRGLLMALAVMFGTAMAFAPIPRITWEHREVHLVQFHEPDIYNYSALLLSEDKDTL
YIGAREAVFAVNALNISEKQHETECLNYIRVLQPLSATSLYVCGTNAFQPACDHLNLTSF
KFLGKNEDGKGRCPFDPAHSYTSVMVDGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAI
PWLNGKEEQCTLVGEPSFVFADVIRKSPDSPDGEDDRVYFFFTEVSVEYEFVFRVLIPRI
ARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSGLVFNVLRDVFVLRSPGLKVPVFYALF
TPQLNNVGLSAVCAYNLSTAEEVFSHGKYMQSTTVEQSHTKWVRYNGPVPKPRPGACIDS
EARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNYTQIVVDRTQALDG
TVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKEPPFVGTWLSC
LDKRKYILPAVGSCAFSLGLSRLQVPPAGPNRTSCPLEVTQLGFAARECFRHLHKPRDAR
TVIWDVILNPSHKRGSHMASSAQVSAAAAAGNRFVYAGSNSGVVQAPLAFCGKHGTCEDC
VLARDPYCAWSPPTATCVALHQTESPSRGLIQEMSGDASVCPDKSKGSYRQHFFKHGGTA
ELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKN
KTVFQVVAKHVLEVKVVPKPVVAPTLSVVQTEGSRIATKVLVASTQGSSPPTPAVQATSS
GAITLPPKPAPTGTSCEPKIVINTVPQLHSEKTMYLKSSDNRLLMSLFLFFFVLFLCLFF
YNCYKGYLPRQCLKFRSALLIGKKKPKSDFCDREQSLKETLVEPGSFSQQNGEHPKPALD
TGYETEQDTITSKVPTDREDSQRIDDLSARDKPFDVKSSGAGPDSSSRVSLLPPFLSDQA
QHVHALGNFYLFCQATVLASRKWNYQWKMIRKDPLMALAQASLVPGAGWDGPEKALGHPR
GVIVGTMPLQCPGPADIRFVWEKNGRALETCVPVQTHALPDGRAHALSWLQDAIRESAEY
RCSVLSSAGNKTSKVQVAVMRPEVTHQERWTRELSAWRAVAGEHDRMMQSWRKAWNTGLY
FIKRCSLCLCPVNAQLLQQDTKLDAESQIGQLCKSPGAILNFLTME

>gi568815589f:89211293_89416422|GENSCAN_predicted_CDS_3|3561_bp
atgtgcacccccattagggggctgctcatggcccttgcagtgatgtttgggacagcgatg
gcatttgcacccataccccggatcacctgggagcacagagaggtgcacctggtgcagttt
catgagccagacatctacaactactcagccttgctgctgagcgaggacaaggacaccttg
tacataggtgcccgggaggcggtcttcgctgtgaacgcactcaacatctccgagaagcag
catgagacagagtgcctcaactacatccgggtgctgcagccactcagcgccacttccctt
tacgtgtgtgggaccaacgcattccagccggcctgtgaccacctgaacttaacatccttt
aagtttctggggaaaaatgaagatggcaaaggaagatgtccctttgacccagcacacagc
tacacatccgtcatggttgatggagaactttattcggggacgtcgtataattttttggga
agtgaacccatcatctcccgaaattcttcccacagtcctctgaggacagaatatgcaatc
ccttggctgaacggtaaggaagagcagtgcaccttagtgggagagcctagtttcgtgttt
gctgacgtgatccgaaaaagcccagacagccccgacggcgaggatgacagggtctacttc
ttcttcacggaggtgtctgtggagtatgagtttgtgttcagggtgctgatcccacggata
gcaagagtgtgcaagggggaccagggcggcctgaggaccttgcagaagaaatggacctcc
ttcctgaaagcccgactcatctgctcccggccagacagcggcttggtcttcaatgtgctg
cgggatgtcttcgtgctcaggtccccgggcctgaaggtgcctgtgttctatgcactcttc
accccacagctgaacaacgtggggctgtcggcagtgtgcgcctacaacctgtccacagcc
gaggaggtcttctcccacgggaagtacatgcagagcaccacagtggagcagtcccacacc
aagtgggtgcgctataatggcccggtacccaagccgcggcctggagcgtgcatcgacagc
gaggcacgggccgccaactacaccagctccttgaatttgccagacaagacgctgcagttc
gttaaagaccaccctttgatggatgactcggtaaccccaatagacaacaggcccaggtta
atcaagaaagatgtgaactacacccagatcgtggtggaccggacccaggccctggatggg
actgtctatgatgtcatgtttgtcagcacagaccggggagctctgcacaaagccatcagc
ctcgagcacgctgttcacatcatcgaggagacccagctcttccaggactttgagccagtc
cagaccctgctgctgtcttcaaagaaggagcctccattcgtggggacgtggcttagttgc
ctggacaagcggaaatacatcctgcctgccgtggggtcctgtgccttctccttgggcctc
agtaggctccaggtgccccccgcgggacccaacaggaccagctgtcccttggaagttacc
cagcttggctttgctgccagagaatgtttccgccacctccacaagccgcgcgatgcccga
actgtgatctgggatgtcatcctcaatccttcccacaaacgtggctcacacatggcctca
tctgcccaggtctctgctgctgctgctgctggcaacaggtttgtctatgctggctctaac
tcgggcgtggtccaggccccgctggccttctgtgggaagcacggcacctgcgaggactgt
gtgctggcgcgggacccctactgcgcctggagcccgcccacagcgacctgcgtggctctg
caccagaccgagagccccagcaggggtttgattcaggagatgagcggcgatgcttctgtg
tgcccggataaaagtaaaggaagttaccggcagcattttttcaagcacggtggcacagcg
gaactgaaatgctcccaaaaatccaacctggcccgggtcttttggaagttccagaatggc
gtgttgaaggccgagagccccaagtacggtcttatgggcagaaaaaacttgctcatcttc
aacttgtcagaaggagacagtggggtgtaccagtgcctgtcagaggagagggttaagaac
aaaacggtcttccaagtggtcgccaagcacgtcctggaagtgaaggtggttccaaagccc
gtagtggcccccaccttgtcagttgttcagacagaaggtagtaggattgccaccaaagtg
ttggtggcatccacccaagggtcttctcccccaaccccagccgtgcaggccacctcctcc
ggggccatcacccttcctcccaagcctgcgcccaccggcacatcctgcgaaccaaagatc
gtcatcaacacggtcccccagctccactcggagaaaaccatgtatcttaagtccagcgac
aaccgcctcctcatgtccctcttcctcttcttctttgttctcttcctctgcctctttttc
tacaactgctataagggatacctgcccagacagtgcttgaaattccgctcggccctacta
attgggaagaagaagcccaagtcagatttctgtgaccgtgagcagagcctgaaggagacg
ttagtagagccagggagcttctcccagcagaatggggagcaccccaagccagccctggac
accggctatgagaccgagcaagacaccatcaccagcaaagtccccacggatagggaggac
tcacagaggatcgacgacctttctgccagggacaagccctttgacgtcaagtcctcgggt
gcggggcccgacagcagctcgagggtctccttgctgccgcccttcctgagtgaccaggca
cagcacgtgcacgccctggggaacttctacctcttctgccaggccacagttctcgcctct
aggaagtggaattatcagtggaagatgatacggaaagatccactgatggccctggcacag
gccagccttgtccctggggcaggatgggacggtcctgagaaggccctgggacaccctagg
ggtgtcatagtgggaactatgcctttgcagtgcccaggtcctgcagacattcgctttgtc
tgggagaagaatgggcgagctctggagacctgtgtccctgtgcagacccatgcactgccc
gatggcagggcccatgcactcagctggctgcaggacgccatcagggaaagcgctgagtat
cgctgctctgtcctctcctcagcagggaacaagacttcgaaggtgcaggttgctgtgatg
agacctgaagtgacccaccaggagaggtggaccagagagctctctgcctggagggctgtg
gctggggagcacgaccggatgatgcagagctggaggaaggcgtggaatactgggctctat
tttatcaagcgctgcagtttatgcctctgtcccgtcaatgctcagcttctgcaacaggac
accaaacttgatgcagaaagccaaataggtcaattatgcaaatctcctggtgccatatta
aatttcttgacgatggaatga