GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:52:48

Sequence gi568815586r:24718011_25001888 : 283878 bp : 39.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16188  16358  171  2  0   53   87   101 0.326   5.99
 1.02 Intr +  55961  56108  148  1  1   68   15   122 0.113   1.79
 1.03 Intr +  59535  59606   72  1  0   82   92    47 0.192   2.96
 1.04 Intr +  66589  66620   32  2  2  115  115    20 0.018   4.33
 1.05 Intr +  88739  88855  117  1  0   49  100    82 0.077   5.24
 1.06 Intr +  89699  89747   49  1  1   83   20   105 0.099   0.53
 1.07 Term + 100424 100584  161  0  2   44   43   176 0.019   5.82
 1.08 PlyA + 101773 101778    6                               1.05

 2.17 PlyA - 101962 101957    6                               1.05
 2.16 Term - 103959 103876   84  0  0   84   41    83 0.002  -0.13
 2.15 Intr - 111887 111813   75  2  0  109  103    57 0.597   8.09
 2.14 Intr - 114853 114713  141  1  0   69   80    90 0.114   5.93
 2.13 Intr - 119790 119711   80  1  2   49   41    59 0.042  -4.35
 2.12 Intr - 124214 124072  143  1  2   96   74   131 0.489  11.58
 2.11 Intr - 131939 131776  164  2  2   74  110    78 0.079   6.45
 2.10 Intr - 149147 149001  147  2  0   63   81    62 0.001   2.51
 2.09 Intr - 160639 160520  120  1  0  108   41   147 0.902  11.77
 2.08 Intr - 163401 163291  111  0  0   73   96   104 0.864   9.36
 2.07 Intr - 176465 176265  201  2  0   84  100   179 0.965  17.26
 2.06 Intr - 183875 183804   72  2  0   68  115    49 0.690   4.28
 2.05 Intr - 184801 184657  145  0  1   90   58   125 0.364   9.06
 2.04 Intr - 185327 185103  225  1  0   32   22   195 0.217   3.48
 2.03 Intr - 191711 191580  132  1  0   58   97   127 0.663   9.44
 2.02 Intr - 202090 202066   25  2  1   98  110    14 0.227   0.77
 2.01 Init - 208768 208648  121  1  1   68   74    94 0.440   6.40
 2.00 Prom - 216364 216325   40                              -7.35

 3.00 Prom + 221334 221373   40                              -3.85
 3.01 Init + 223467 223611  145  2  1   -6  115   122 0.619   5.83
 3.02 Intr + 230941 231320  380  2  2  -18   65   313 0.271  12.16
 3.03 Intr + 249139 249343  205  0  1   25   63   270 0.048  16.05
 3.04 Intr + 257809 257940  132  2  0   91   26    94 0.014   3.20
 3.05 Term + 265405 265547  143  2  2   48   44   124 0.003   1.11
 3.06 PlyA + 267217 267222    6                               1.05

 4.05 PlyA - 267329 267324    6                               1.05
 4.04 Term - 270911 270704  208  1  1  -21   43   175 0.052  -2.07
 4.03 Intr - 278057 277797  261  1  0   56   75   189 0.896  10.08
 4.02 Intr - 278329 278187  143  1  2   70  109    66 0.976   5.13
 4.01 Intr - 283697 283592  106  1  1  104   54   101 0.597   7.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  99300  99392   93  2  0   94   44    52 0.854   1.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:24718011_25001888|GENSCAN_predicted_peptide_1|249_aa
MTEKVLQFLVIGTERNKETLAFSERFLQDKLPGETIDEVLMSTWVLIALVGLTVLLKQSW
NQGTTGNHILTLQMITHTPHGRSGKSSDAPAFQDNMMLLYIPWTMTSLVPSIRQIRHGPV
YRRINATAETELVTKIKGGKQEFTKTDLQKITLIDVEYRDMKVEMTTEMFPNLNLVVGAP
AFNGSDEAHSLSHIMEVILKVYSQTTSISITRQQVKNANSQTSSQTESESGDGFQQPVIQ
QASNDSDMH

>gi568815586r:24718011_25001888|GENSCAN_predicted_CDS_1|750_bp
atgacagaaaaggtcttacagtttcttgtaataggtactgaacgaaacaaggaaacttta
gcattctcagagagatttctccaggacaaactcccaggtgaaaccatagatgaggtgttg
atgagtacctgggttcttattgccctggttggacttacagtgctgttgaagcaatcctgg
aatcagggcactacgggtaaccacattctcactttacaaatgataactcacacaccccat
ggaagatccgggaagtcttctgatgcccctgctttccaagacaatatgatgcttctctac
attccatggactatgacaagcctggtgccaagcattagacaaataagacatggccctgtt
tatcgtagaataaatgctacggcggaaacagagctagtaacaaagataaaaggaggaaag
caggagtttacaaaaactgacttgcaaaagataactttaatagatgtggaatacagagat
atgaaagttgaaatgactacagagatgtttcctaacttgaacctggtagtgggagcacca
gccttcaatggatcggatgaggcccactcactttctcacattatggaggtgatcctcaaa
gtgtattctcagaccactagcatcagcatcaccagacaacaagttaaaaatgcaaattcc
cagacctcatctcagactgaatcagaatctggggatgggttccagcaacctgtgattcag
caagcatcaaatgattccgacatgcactaa

>gi568815586r:24718011_25001888|GENSCAN_predicted_peptide_2|661_aa
MTLKEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGDREMEAQRGPLIKAVTGSRQ
TGRENTMQQKERLKCWQLQAKKHLGYQKLEEERGCLINKDAREISALGKALVRGAHSRAS
ASDPGDRDNRFGFSDCRQTGTRRLEAPPQGMLEGLRRTLRLALARGPSEASSLPRIPARN
LESQPAISTSSRFPLPRSSTLMGNPLRSVARTATGDDCSNGCSAECTGEGGSKEVVGTFK
AKDLIVTPATILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSS
ALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVK
LDQEWVPYSTSASLYIRPTFIGTEVRGLVGSGVKLRTFAVSVAALKAACLELFVPCGGFV
VSLASGVKLQTFPPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGG
TGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGESKGS
ISILVADAPPGLKITKDRLLGWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCP
VSDILYKGETIHIPTMENGPKLASRILSKLTDIQVLLHLLEIAHLDKALAVLYDSSRSEA
F

>gi568815586r:24718011_25001888|GENSCAN_predicted_CDS_2|1986_bp
atgactcttaaagagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcaccgggttggg
gatagagaaatggaagcacagagaggtccattaatcaaagcagttacaggaagcagacag
acaggaagggaaaacacaatgcaacagaaggagagattgaagtgttggcagctgcaagcc
aagaaacacctgggttaccagaagctagaagaagaaagaggttgtttaataaacaaggat
gctcgcgaaatatctgcgcttggaaaggcgctcgttcgtggcgcgcattctcgggcctcc
gcaagcgaccccggtgacagggacaaccgcttcggttttagcgactgcagacagactggg
acgagacggttggaggctcctccccaagggatgctggaggggttgcgtcgtaccctgcgc
ctggccctggcgcgcggccccagcgaggcgtcttcccttccccgcatccctgcccgaaat
ctggagtcccagcctgcaatctccacctcttcgaggttcccgctgcccaggtctagcacc
ctcatgggtaacccgctccggagcgtggcgaggaccgccacgggggacgattgcagtaac
ggatgctccgcagagtgtaccggagaaggaggatcaaaagaggtggtggggacttttaag
gctaaagacctaatagtcacaccagctaccattttaaaggaaaaaccagaccccaataat
ctggtttttggaactgtgttcacggatcatatgctgacggtggagtggtcctcagagttt
ggatgggagaaacctcatatcaagcctcttcagaacctgtcattgcaccctggctcatca
gctttgcactatgcagtggaattatttgaaggattgaaggcatttcgaggagtagataat
aaaattcgactgtttcagccaaacctcaacatggatagaatgtatcgctctgctgtgagg
gcaactctgccggtatttgacaaagaagagctcttagagtgtattcaacagcttgtgaaa
ttggatcaagaatgggtcccatattcaacatctgctagtctgtatattcgtcctacattc
attggaactgaggttcgtggtctcgttggctcaggagtgaagctgcggacctttgcggtg
agtgttgcagctcttaaggcggcatgtctggagttgttcgttccttgcggtgggttcgtg
gtctcgctggcttcaggagtgaagctgcagaccttcccaccttctcttggagtcaagaag
cctaccaaagccctgctctttgtactcttgagcccagtgggaccttatttttcaagtgga
acctttaatccagtgtccctgtgggccaatcccaagtatgtaagagcctggaaaggtgga
actggggactgcaagatgggagggaattacggctcatctctttttgcccaatgtgaagca
gtagataatgggtgtcagcaggtcctgtggctctatggagaggaccatcagatcactgaa
gtgggaactatgaatctttttctttactggataaatgaagatggagagagcaaaggcagc
atctccatacttgttgctgatgctccaccaggtttgaaaatcactaaagatagactctta
ggctggggtgaatttaaggtgtcagagagatacctcaccatggatgacttgacaacagcc
ctggaggggaacagagtgagagagatgtttggctctggtacagcctgtgttgtttgccca
gtttctgatatactgtacaaaggcgagacaatacacattccaactatggagaatggtcct
aagctggcaagccgcatcttgagcaaattaactgatatccaggttttgctgcaccttcta
gaaattgctcacctggataaggccttggctgtcctttatgactcatctcgttcagaagcc
ttttga

>gi568815586r:24718011_25001888|GENSCAN_predicted_peptide_3|334_aa
MCHSKTEKYKTESINLNLESPEIGSRFNSTNICKAPTMVQGSCHGRRKGKLELSGGQIPR
VVAPGRVDRVCGCRARSRLQQDLGQCPRRRRVHVAGWIADRPSRGGDSRPSGLHQQEDTK
AAPPGRPQMVESLPARRFGASAQTRASLTAHSRGAGQRCQCCKQMTRLPPNQPLWLGHLR
FLKAKRQMNPKGNRMMTKKMPRELKQSSSTPDPADGTASHDHDGVGRVPGGGLAVDVVDP
GVAGCQPENPCASTASLVLEHKPQSRALSGKRTWSRVNFHYTGSLRAYIVLVGPLCGISN
PTFLIGIALVGALRGGSIPVAGFCLGFQVVRGIF

>gi568815586r:24718011_25001888|GENSCAN_predicted_CDS_3|1005_bp
atgtgccattcaaaaacagagaagtataaaacagaatcaattaatctgaatcttgaaagt
ccagaaataggctctcgatttaactcaaccaatatctgtaaagcaccaacaatggtgcaa
ggttcctgccatggtagaagaaaagggaagctcgagctgagcggagggcagatcccaagg
gtcgtagcccctggccgtgtggaccgggtctgcggctgcagagcgcggtcccggctgcag
caagacctggggcagtgcccgaggcggcggcgagtacacgtggcgggctggattgcagac
cggccctctcgcggcggagactcgcgacctagcggattgcatcagcaggaagacactaag
gctgctcccccaggccgcccccagatggtggagtctctcccagcccgaagattcggagcc
agcgcccagacccgagcctcactcactgctcactcccggggtgcagggcagaggtgccag
tgttgcaagcaaatgacacggttacccccgaatcagccactgtggttggggcatcttcgc
ttcctcaaggcaaaacggcagatgaacccaaaggggaacaggatgatgaccaagaaaatg
cccagggagctgaagcagtcctccagcacccccgaccctgcagacgggacagcttcccat
gaccatgatggagttggcagggtaccaggtggtggtctggctgtggatgttgtagaccct
ggggtggcgggctgccagccagagaacccttgtgcctctactgcctcccttgtgcttgag
cacaagccccaaagtagagccttgtctgggaaacgtacttggtcccgtgttaatttccat
tacacagggagcctaagagcctatattgtcttagtggggcctctctgtggcatttccaac
cccacatttctgatcggcattgccctagtaggagctcttcgtggtggctccatccctgtg
gcaggtttctgcctgggcttccaggtggtccgtggcatcttttga

>gi568815586r:24718011_25001888|GENSCAN_predicted_peptide_4|239_aa
XTREFRHRLDMRLKETPELETHAPKSCPLLSLNDDVIPKLATPRDISLLVIKEASSRARN
NIQILDPLDHIARLTNYTLTSCFSSNKVPTMPGSLPTGSKQGNVQTLDSIRWMPATPVPA
PECHQKYAISTETAFPTLSTFMNTEKSVKGSNADFTKRNPRWRFLFGIYCRNLDIRLDSR
ERFWVEDKNLGVLSLQVALRAARALEITQGVKADREGKSRAEPYCTSALTSLNDDMRRN

>gi568815586r:24718011_25001888|GENSCAN_predicted_CDS_4|720_bp
nnaaccagagaatttaggcacaggttggacatgaggctaaaagagaccccagaactggaa
actcatgctcccaaatcctgtcccctcctgtcactgaatgatgatgtgataccgaaactg
gcaacacccagagacatttccctcctagtcataaaggaagccagcagcagagccagaaat
aatattcaaattctggatccactagaccatattgcccgtctgacaaattatacgcttaca
tcctgcttcagttctaataaggtacccacaatgccgggttctctacccactgggagcaaa
caagggaacgtgcagacgctggacagcatacgatggatgcctgcaactcctgtacctgcc
cccgaatgccaccagaaatatgccatctctactgaaacagcttttccaaccctgagcacg
tttatgaacacggaaaagagtgtaaaggggtcaaatgcagactttacaaaaagaaaccca
agatggagattcctgttcgggatatactgcaggaatttggatatacgtctggattcaagg
gagaggttttgggtcgaagataaaaatctgggagtcctgagcctacaggtggcacttcga
gctgcgagagctcttgagatcacccagggtgtgaaggcagacagagaagggaagtccagg
gctgagccctactgcacatcagcactcaccagtctgaatgatgacatgaggaggaactag