GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:44:28

Sequence gi568815592f:96503614_96715769 : 212156 bp : 36.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6218   6827  610  1  1   88   14   252 0.193  13.33
 1.02 Intr +   7796   7922  127  0  1  111   87    -3 0.114   0.72
 1.03 Intr +  18230  18337  108  2  0   80   34   127 0.345   4.98
 1.04 Intr +  19533  19678  146  0  2  109   66   204 0.986  19.31
 1.05 Intr +  20769  20797   29  1  2   86   96    18 0.993  -0.68
 1.06 Intr +  21684  21781   98  2  2  108   80    74 0.991   6.49
 1.07 Intr +  22708  22822  115  1  1   75   68   131 0.996   9.33
 1.08 Intr +  24889  25019  131  0  2   99  131   178 0.970  21.77
 1.09 Intr +  27254  27327   74  2  2   85   -9    72 0.416  -4.67
 1.10 Intr +  32631  32777  147  1  0   37   61   141 0.742   5.59
 1.11 Intr +  33761  33936  176  0  2   54   39   180 0.958   8.44
 1.12 Intr +  35018  35197  180  1  0   68   61   106 0.912   5.04
 1.13 Intr +  36922  37042  121  0  1   25   90   103 0.955   3.35
 1.14 Intr +  39281  39403  123  0  0   63   82   116 0.487   8.14
 1.15 Intr +  39989  40135  147  0  0   -1   48   149 0.182   1.29
 1.16 Intr +  45837  45965  129  1  0   10   74    97 0.029   0.25
 1.17 Intr +  46056  46186  131  1  2   81   47    95 0.965   4.19
 1.18 Intr +  47820  47900   81  2  0   82  115     4 0.724   1.42
 1.19 Term +  49672  49890  219  0  0  134   39   223 0.998  18.06
 1.20 PlyA +  50358  50363    6                               1.05

 2.04 PlyA -  50377  50372    6                               1.05
 2.03 Term -  53465  53073  393  2  0   13   49   250 0.632   7.65
 2.02 Intr -  53677  53490  188  2  2  -20   36   116 0.415  -5.91
 2.01 Init -  53970  53766  205  0  1   72   57   189 0.320  13.26
 2.00 Prom -  63268  63229   40                              -5.15

 3.00 Prom +  76952  76991   40                              -4.35
 3.01 Init + 100001 100159  159  1  0   74  115    63 0.947   7.47
 3.02 Intr + 101137 101311  175  0  1   78   58    76 0.773   2.19
 3.03 Intr + 102289 102458  170  2  2   27   86    71 0.601  -0.46
 3.04 Intr + 106959 107145  187  2  1   94   89    66 0.944   5.64
 3.05 Term + 111996 112159  164  1  2  100   49   119 0.992   6.32
 3.06 PlyA + 112935 112940    6                               1.05

 4.00 Prom + 130053 130092   40                              -2.45
 4.01 Sngl + 135530 136144  615  1  0   59   44   279 0.785  16.54
 4.02 PlyA + 136316 136321    6                               1.05

 5.04 PlyA - 139414 139409    6                               1.05
 5.03 Term - 145169 144876  294  2  0   26   36   281 0.565  11.02
 5.02 Intr - 145483 145223  261  1  0   42  -27   363 0.287  16.96
 5.01 Init - 146544 146488   57  0  0   60   33    68 0.589  -0.14
 5.00 Prom - 147391 147352   40                              -4.25

 6.05 PlyA - 147566 147561    6                               1.05
 6.04 Term - 153901 153757  145  0  1   45   50   145 0.123   2.80
 6.03 Intr - 161133 161044   90  2  0   71   81    63 0.090   2.09
 6.02 Intr - 163759 163693   67  2  1   50   78    68 0.497  -0.96
 6.01 Init - 169477 169342  136  1  1   52  111   165 0.751  15.55
 6.00 Prom - 169819 169780   40                              -5.85

 7.00 Prom + 169943 169982   40                              -6.55
 7.01 Init + 171041 171121   81  1  0   84   90    47 0.361   5.52
 7.02 Term + 182230 182928  699  0  0   39   36   337 0.240  16.15
 7.03 PlyA + 183379 183384    6                               1.05

 8.03 PlyA - 183539 183534    6                              -0.45
 8.02 Term - 185779 185668  112  0  1   55   40   129 0.029   1.85
 8.01 Init - 196921 196764  158  1  2   53   52   152 0.309   7.53
 8.00 Prom - 198834 198795   40                              -7.55

 9.03 PlyA - 199044 199039    6                               1.05
 9.02 Term - 201137 200986  152  0  2   58   33   124 0.017   0.99
 9.01 Intr - 206597 206521   77  1  2   77   63   123 0.081   6.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_1|963_aa
MAKRAPDMDQAAASEGASCKPWWLPCGAKTVGAQRVRVKALEPLPRFHRIYENTSISRQK
SAAWMEPSWRISTTAVQRRNVALEAPHKSLHWALPSGAVRRGPPSSRPQNGISTNSLYYV
PGKATGTQHHPVKAAEGTVPSKATEVEMSKALGVHPLYQCGLDVRYGAKGDYFGALRFND
CPSGYWTCMGPVVPSFWLISPSWSVCVLSTPFYKDNRHIGLEYPNDLILTYLLFKNAIYK
YSHILSSSASTASQAVMADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQ
LEVVHTLDGKEYITPAQISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSE
KHVQLVLGQLIDENYLDRLAEEVNDKLQESGQVTISELCKTYDLPGNFLTQALTQRLGRI
ISGHIDLDNRGVIFTEAFVARHKARIRGLFSAITRPSQSRQASTRALNPQAANQYQSVAS
VLEELVNSGRLRGTVVGGRQDKAVFVPDIYSRTQSTWVDSFFRQNGYLEFDALSRLGIPD
AVSYIKKRYKTTQLLFLKAACVGQGLVDQVEASVEEAISSGTWVDIAPLLPTSLSVEDAA
ILLQQVMRAFSKQASTVVFSDTVVVSEKFINDCTELFRELMHQKAEKEMKNNPVHLITEE
DLKQISTLESVSTSKKDKKDERRRKATEGSGSMRGGGGGNAREYKIKKVKKKGRKDDDSD
DESQSSHTENEESGYDKKDENILEDVKWGKTSQFLEIFQDIEKARDKTLEADSELESVFM
SSTTSASGTGRKRTIKDLQEEVSNLYNNIRLFEKGMKFFADDTQAALTKHLLKSVCTDIT
NLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTKLHNSLNEKDQHALLVKY
QGLVVKQLVSQSKKTGQGDYPLNNELDKEQEDVASTTRKELQELSSSIKDLVLKSRKSSV
TEE

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_1|2892_bp
atggctaaaagggccccagatatggatcaggctgctgcttcagagggtgcaagctgtaag
ccttggtggcttccatgtggtgctaagactgtgggtgcacagagggtaagagttaaggct
ttggagcctctgcccagatttcatagaatatatgaaaacacctcaatatccaggcagaag
tctgctgcctggatggaaccctcatggagaatctctactacagcagtgcagaggagaaat
gtagcgttggaggccccacacaaaagtctccactgggcactgcctagtggagctgtgaga
agagggccaccgtcctccagaccccagaatggtatatccaccaacagcttgtactatgtg
cctggaaaagccacaggcactcaacaccatcctgtaaaagcagctgaggggactgtaccc
agcaaagctacagaggtggagatgtccaaggccttgggagtccaccccttgtatcagtgt
ggcctggatgtgagatatggagccaaaggagattatttcggagctttaagatttaatgac
tgcccttctgggtattggacttgcatggggcctgtagtgccttcgttttggctgatttct
ccctcttggagtgtctgtgtcttaagcacacctttttataaggacaacaggcatattgga
ttagagtaccctaatgacctcattttaacctacttactgtttaaaaacgctatctacaaa
tacagtcacattttaagttcctccgcgtctactgcgagtcaggccgtgatggcggacgcc
tgggaagagattaggcggttggcggccgacttccagcgggcgcagttcgccgaggccacg
cagaggttgtccgagcggaactgcattgagattgttaataaattgattgctcagaaacag
ctagaagtagttcatacactcgatggaaaggaatatattactccagcccaaattagtaaa
gaaatgagagatgagctacatgtccgaggtggtcgagtaaacattgttgatctacaacag
gtaattaatgtggacctgattcatattgaaaatagaattggtgacattattaaatcagaa
aagcatgttcagttagtgttgggacaactgatagatgagaattatttggatcggttggca
gaagaggtcaatgataaattgcaagaaagtggtcaggtcaccatatcagaactgtgtaaa
acttatgatcttcctgggaactttctgacacaggcactaactcagcgacttggtagaatt
atcagtggacatattgatcttgataatagaggagtaatttttacggaagcttttgtagct
cgacataaagcacgtatccgtggactattcagtgctattacccggccctctcaaagtaga
caagctagcacaagggccctcaatccccaggctgccaatcagtaccagtctgtggcctct
gtgcttgaggaacttgttaatagcggacgcttacgaggcactgtggttggtgggagacag
gataaagctgtgtttgtccctgacatctactccaggacacagagtacttgggtggattcc
tttttcaggcagaatggctatctagaatttgatgctttgtccagacttggaatcccagat
gctgtaagctacataaagaaaagatataagactacacaactcttgtttttgaaagcagct
tgtgttggtcaaggacttgtggatcaagtggaagcatcagtagaagaagccatcagctct
ggaacatgggttgatattgcacctctgctacccacttctttatcagttgaagatgctgcc
atattgcttcagcaggtgatgagggcattcagcaaacaggcctcaactgtagtctttagc
gacactgttgtagtcagtgaaaaatttataaatgactgtacagaactgttccgtgagctg
atgcaccagaaagctgaaaaggaaatgaaaaataatcctgtgcatttaatcactgaagaa
gatctgaaacaaatctccactttagaaagcgttagtacaagtaaaaaggataaaaaagat
gagcgaagaaggaaagcaacagagggcagtggaagcatgagaggaggaggtgggggcaat
gccagagagtacaaaattaaaaaagtcaagaagaaaggaagaaaagatgatgatagtgat
gatgaatctcaatcatcccacactgaaaatgaggaaagtggttatgacaaaaaggatgaa
aacatcttagaggatgtaaagtggggaaaaacttcacaattcttggagatattccaagac
attgaaaaggcaagggataaaacattggaagctgattcagagttagaaagtgtattcatg
tcttcaacaacttctgcttctgggacgggcagaaaacgcacaatcaaggacttgcaagaa
gaagtttcaaacctgtacaataacattaggttatttgaaaaagggatgaagttttttgca
gatgacacacaggctgctcttaccaaacacttgctgaagtcagtgtgtactgatatcact
aacctcattttcaacttcttagcttcggatttaatgatggcagtagacgatcctgcagcc
attacaagtgaaataagaaagaaaattttaagtaaattatcagaagaaaccaaagtagct
cttacaaaactccataactctctgaatgaaaaggatcagcatgctcttttggtaaagtat
caaggtttggttgtaaagcagctagtcagtcaaagtaagaagactgggcagggagattat
cccttgaataatgaattagacaaagaacaagaagatgttgccagtactactcgtaaagag
cttcaagaactttcttcatccattaaagaccttgttctcaaatctaggaaatcatctgtg
acggaagagtaa

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_2|261_aa
MDNKVQVEVISDGDEELVGNWSKGDSRYVLAKKLVASLPCPRDLWNFELERDDLGYLVEE
ISKQQSIQEKKNPFSEEKFKPAAETCISNREPNVKSPRQWGKMSPWRIRDLHGSLSHHRP
RGLGENGFVGQGLGALHPNHSNHGFRGCKPKPWQLPRDVESASARKSRIEVWKPPPIFQK
MYGNVWMPLQTFAAGAGSSWRTSARAVQKGNVGWEPPHRVPTRAPPSGALRRGPLSSRPQ
NGSSTDSLHHVPGNATLNASP

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_2|786_bp
atggacaataaagtccaggttgaggtgatctcagatggagatgaggaacttgttgggaac
tggagcaaaggtgactctcgttatgttttagcaaagaaactggtggcatctctcccctgc
cctagagatctgtggaactttgaacttgagagagatgatttagggtatctggtggaagaa
atttctaagcagcaaagcattcaagaaaagaaaaacccattttctgaggagaaattcaag
ccagctgcagaaacttgcataagtaacagggaaccaaatgttaaatcaccaagacaatgg
gggaaaatgtctccatggcgtatcagagatcttcacggcagcctctcccatcacaggccc
agaggcctaggagaaaatggtttcgtgggccagggacttggtgccctgcatcccaaccac
tctaatcatggcttcagagggtgcaagcccaagccttggcagcttccacgtgatgttgag
tctgcgagtgcacggaagtcaagaattgaggtttggaaacctccgcctatatttcagaag
atgtatggaaacgtctggatgcccctgcagacgtttgctgcaggggcggggtcctcatgg
agaacctctgctagagcagtgcagaagggaaatgtggggtgggagcccccacacagagtc
cctactagggcaccgcctagtggagctctgagaagagggcctctgtcctccagaccccag
aatggtagctccactgacagcttgcaccatgtgcctggaaatgccacactcaatgccagc
ccatga

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_3|284_aa
MTTAHFYCQYCTASLLGKKYVLKDDSPYCVTCYDRVFSNYCEECKKPIESDSKDLCYKDR
HWHEGCFKCTKCNHSLVEKPFAAKDERLLCTECYSNECSSKCFHCKRTIMPGSRKMEFKG
NYWHETCFVCENCRQPIGTKPLISKESGNYCVPCFEKEFAHYCNFCKKVITSGGITFCDQ
LWHKECFLCSGCRKDLCEEQFMSRDDYPFCVDCYNHLYANKCVACSKPISGLTGAKFICF
QDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGMDTDI

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_3|855_bp
atgacaactgctcacttttactgtcaatactgcacagcatcacttcttgggaagaaatat
gtactaaaggatgacagtccatactgtgttacatgttatgatcgtgtattttctaactat
tgcgaggaatgcaaaaaaccaattgaatctgattctaaggatctttgttacaaagaccgg
cactggcatgaaggatgcttcaagtgcaccaaatgcaatcactctttggtggaaaagcct
tttgctgccaaggatgagcgcctgctgtgcacggagtgctattctaacgagtgctcctcc
aagtgcttccactgcaagaggaccatcatgcctggttcccgcaaaatggaatttaaggga
aactactggcatgaaacctgttttgtgtgtgagaattgccgacaacctatagggacaaag
cctttgatctccaaagagagtggcaattattgtgtgccatgttttgagaaggagtttgct
cactactgcaacttttgtaagaaggtgataacttcaggtgggataacattttgtgaccag
ctatggcataaagagtgttttctgtgtagtggctgtaggaaagatctctgtgaagaacag
ttcatgtccagagacgactatccattctgcgtggactgctacaaccatctttatgccaac
aagtgtgtagcctgttccaaacccattagtggtctcacaggtgccaagtttatctgcttt
caagacagccagtggcatagcgaatgctttaactgcgggaaatgctctgtctccttggtg
ggtaaaggcttcctgacccagaacaaggaaatcttctgccaaaaatgtggctccggaatg
gacactgacatctag

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_4|204_aa
MEDEMNEMKREENFREKRIKRREQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIRENFPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVKFTKVEMKEKMLRATREKDQV
THKWKPIRLTADLLAETLQARREWGPIFNILKGKNFQPRISYPAKLSFISEGEIKSFTDK
QMLRDFVTIKARKKLHQLTSKITS

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_4|615_bp
atggaagatgaaatgaatgaaatgaagcgagaagagaattttagagaaaaaagaataaaa
agaagggaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctc
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccgggagaacttccccaatctagcaaggcaggccaacattcaaattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaaa
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcaaccagagagaaagaccaggtt
acccacaaatggaagcccatcagactaacagctgatctcttggcagaaactctacaagcc
agaagagagtgggggccaatattcaacattcttaaaggaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatcctttacagacaag
caaatgctgagagattttgtcaccatcaaagctaggaagaaactgcatcaactaacgagc
aaaataaccagctaa

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_5|203_aa
METTHTRTLHSETAEHRHKLALSKEKAIFSSSAKIMKPNDEKPDELKPSISQALLQLEMS
SDLKAQLRELNITAAKETEVGSGRKAIIIFVPVPKLKSFQKIQVQLRRILPKPTRKSCMK
NKQKHPRSRALTAVHDAILEDLVFPSEIVGKRICMKLDGGLLVKVHLDKAQQNNVEHKVE
IFSGVYKKLTGKDVNFEFPEFQL

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_5|612_bp
atggaaacgacccacacgaggacacttcatagtgaaactgcagagcacagacataaactg
gcgctcagcaaggaaaaggccatattcagttccagcgccaagatcatgaagcccaatgac
gagaagccggacgagctcaagcccagcatctcccaggctcttctgcagctggagatgagc
tcagacctcaaggctcagctcagggagctgaatattacggcagccaaagaaactgaagtt
ggtagtggtcggaaagctatcataatctttgttcccgttcctaaactgaaatctttccag
aaaatccaagtccagctaaggagaattctgcctaagccaactcgaaaaagctgtatgaaa
aataagcaaaagcatcccaggagccgtgccctgacagctgtgcacgacgcaatccttgag
gacttggtcttcccaagtgaaattgtgggcaagagaatctgcatgaaactggacggtggc
ctgctcgtaaaggttcatttggacaaagcacagcagaacaatgtggaacacaaagttgaa
attttttctggtgtctataagaagctcacgggcaaggatgttaattttgaattcccagag
tttcaattgtaa

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_6|145_aa
MSGRTLEMSGRTLEISGSWVMEDQDKLSNVSSSIPWLLEVKGPKPEPSIKSAGKEIKEFA
EFRSSTTNYWLSVQEITGPRPNTWHSAAIAALFTITKRGQLRSAPPGGEWRALGDGPLSS
LSAGEPSVQKLPGSMPSNGLSLHAL

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_6|438_bp
atgagtggcagaaccttggagatgagtggcagaaccttggagataagtggcagttgggtg
atggaagatcaggataaactcagcaatgtcagcagcagcatcccttggctgctggaagtg
aaggggccaaagcccgagcctagtatcaaatcagctggcaaagaaataaaggagtttgca
gaatttagatctagcaccacaaattattggctttctgtgcaggaaataacaggacctagg
ccaaatacctggcattcggcagcaatagcagcattattcacaataaccaaaagaggtcag
ctgcggtctgcacctcctggaggggaatggcgagccctgggggatgggcctctgtcctca
ctctctgctggagagcctagtgtacaaaagctcccaggctccatgccgtccaatggcctg
tctctgcacgctctctag

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_7|259_aa
MKNMKEGFPEKLIYLKDKLELAKNRLEPRDLVPCIPATLAVAERGKHRAQAVASEGVSLR
HWWLSHGFEPVSAQKSRTGVWGPPPRFQKIYRNAWMPRQKFASGARFSWRTSARAMQKGN
VGSEPPHRVPTGELPSRATVSRPPSSRPQNGRSTDSLYHALGKATDTQCQPMKAARRETV
PCKATGVELPKTIGNQLLHQCDLDMRCGVKGDYFGALRFDCPSGFLTCMGPVAPFVLANL
SHLEWLYLPNVCTPIVSRK

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_7|780_bp
atgaagaacatgaaagaaggcttccctgagaaactcatttatctaaaggataaattggag
ttagccaagaacaggttggagcctagggacttggtgccctgcatcccagccactctagct
gtggctgaaaggggaaaacatagagctcaggctgtggcttcagagggtgtaagcctcagg
cattggtggctttcacatggttttgagcctgtgagtgcacagaagtcaagaactggggtt
tggggacctccacctagatttcagaagatctatagaaacgcctggatgcccaggcagaag
tttgcttcaggggcaaggttctcatggagaacctctgctagggcaatgcagaagggaaat
gtgggttcagagcccccacacagagtccctactggggaactgcctagtagagcaactgtc
tccagaccaccgtcctccagaccccagaatggtagatccactgacagtttgtaccatgca
cttggaaaagccacagacactcaatgccagcccatgaaggcagctcgaagagagactgta
ccctgcaaagccacaggggtggagctgcccaagaccattggaaaccagcttttacatcag
tgtgacctggatatgagatgtggagtcaaaggagattattttggagctttaagatttgac
tgcccctctggatttctgacttgcatggggcctgtagccccatttgttttagccaatttg
tcccatttggaatggctgtatttacccaatgtctgtacccccattgtatctaggaagtaa

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_8|89_aa
MRKVFHIPSFEDGERWPQAKECGQALEAGKGKGTYFLLDLPKRNAVTDKSLAKDCAGSYL
KPAQYWVSLSAHGGHYLVTAYICSMPSIP

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_8|270_bp
atgagaaaggtgtttcatattcccagttttgaagatggagaaagatggccacaagccaag
gaatgtggacaggctctagaagctggaaaagggaaggggacctattttcttctagacctt
ccaaaaaggaatgcagtcactgacaaatctttagccaaagactgtgctgggtcatacctg
aagccagcccagtactgggtctcactcagtgcccacggcggccactacctggtgactgcc
tatatttgctcaatgccctcaataccctag

>gi568815592f:96503614_96715769|GENSCAN_predicted_peptide_9|76_aa
XEDKGAHAQKEVDWECLRTQRLTIKEGAAKSSKQNPCLPLTAQVPLDLLDQVAGQLVQQP
GPAAEPSFVLGTTLNE

>gi568815592f:96503614_96715769|GENSCAN_predicted_CDS_9|231_bp
nnagaggacaaaggagcacatgctcaaaaagaagtagattgggagtgcctgcggacccag
agactgaccatcaaagaaggggctgctaaaagctccaaacagaatccctgtttgccactg
acagctcaagtaccattggatctgctggatcaagtggcagggcagcttgtacagcagcct
ggacctgctgcagagccttcttttgttttgggcaccactttaaatgagtag