GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:39:42

Sequence gi568815587r:10414919_10634158 : 219240 bp : 43.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  36026  36125  100  1  1   50  117    81 0.254   6.88
 1.02 Intr +  36245  36346  102  0  0   90   99    38 0.853   5.25
 1.03 Intr +  40468  40530   63  2  0   65   61    67 0.252   0.39
 1.04 Intr +  46597  46822  226  2  1   86   76   403 0.828  35.94
 1.05 Intr +  63608  63812  205  2  1   84   74   180 0.523  15.40
 1.06 Intr +  67145  67307  163  1  1  115   80   197 0.979  21.15
 1.07 Intr +  69902  70121  220  0  1   93   87   387 0.958  36.46
 1.08 Intr +  72227  72446  220  2  1   84  100   148 0.800  13.90
 1.09 Intr +  78431  78720  290  1  2   87   33   418 0.571  32.24
 1.10 Intr +  79750  79912  163  1  1   80   25   125 0.647   5.38
 1.11 Intr +  79981  80112  132  0  0  107  113   114 0.999  16.64
 1.12 Intr +  80652  80815  164  2  2   67   83   279 0.996  24.07
 1.13 Intr +  81894  82020  127  0  1   69   92   109 0.737  10.08
 1.14 Intr +  85168  85331  164  0  2   60   96   294 0.998  26.17
 1.15 Intr +  86552  86672  121  2  1  121   86   158 0.998  19.40
 1.16 Intr +  87803  87976  174  1  0   73  116   100 0.950  11.44
 1.17 Intr +  89631  89741  111  2  0  -52   80   181 0.655   3.88
 1.18 Term +  90790  90966  177  0  0   94   42   181 0.999  11.79
 1.19 PlyA +  92185  92190    6                               1.05

 2.12 PlyA -  94205  94200    6                               1.05
 2.11 Term -  96272  96206   67  1  1   91   38    48 0.242  -2.49
 2.10 Intr - 104223 104116  108  2  0   48  115    66 0.427   4.70
 2.09 Intr - 110455 110274  182  1  2   88   71    63 0.693   3.27
 2.08 Intr - 115833 115725  109  2  1  131  100    32 0.733   8.99
 2.07 Intr - 139934 139849   86  2  2    8  116    61 0.007  -0.48
 2.06 Intr - 144379 144220  160  0  1   95    9   185 0.019  11.29
 2.05 Intr - 144976 144898   79  2  1  116   97    11 0.971   3.41
 2.04 Intr - 145882 145577  306  2  0   90   84    65 0.550   2.72
 2.03 Intr - 149161 149022  140  0  2   84  105    20 0.975   3.41
 2.02 Intr - 149456 149285  172  0  1   66   94   122 0.985   9.60
 2.01 Init - 153614 153530   85  2  1  110  100    84 0.998  10.78
 2.00 Prom - 154189 154150   40                              -4.96

 3.20 PlyA - 156339 156334    6                               1.05
 3.19 Term - 161657 161414  244  1  1   74   49    47 0.324  -5.23
 3.18 Intr - 165671 165537  135  1  0  125   75   205 0.894  22.58
 3.17 Intr - 167068 166949  120  0  0   94   84   124 0.972  12.21
 3.16 Intr - 176694 176630   65  0  2   79  106     7 0.563  -0.88
 3.15 Intr - 178681 178574  108  1  0  103  111    -7 0.778   3.58
 3.14 Intr - 179277 179228   50  1  2   92   91    -2 0.755  -1.10
 3.13 Intr - 186141 186000  142  0  1  126   95   188 0.952  23.23
 3.12 Intr - 188333 188202  132  2  0   60  109   123 0.987  12.44
 3.11 Intr - 189627 189469  159  0  0  102   48   127 0.599  10.28
 3.10 Intr - 190768 190622  147  1  0   75   75    31 0.648   0.93
 3.09 Intr - 191854 191824   31  0  1   91  107    20 0.964   2.33
 3.08 Intr - 194909 194810  100  0  1   68   93   107 0.670   8.37
 3.07 Intr - 208938 208860   79  0  1   49  100    60 0.586   2.42
 3.06 Intr - 211665 211048  618  0  0  100   90   439 0.859  37.81
 3.05 Intr - 211906 211760  147  1  0   44   93    45 0.508   1.03
 3.04 Intr - 212845 212798   48  1  0  104   76    37 0.654   2.98
 3.03 Intr - 214793 214687  107  0  2  112   97   253 0.700  28.53
 3.02 Intr - 217143 217073   71  2  2   80   82    15 0.865  -1.07
 3.01 Intr - 219153 219050  104  0  2   78   92    77 0.638   6.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 126144 126432  289  0  1   74   53   152 0.873   5.15
S.002 Term - 144379 144193  187  0  1   95   37   214 0.980  13.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:10414919_10634158|GENSCAN_predicted_peptide_1|973_aa
CPAAPLRSAQRVPFAPALRPSLSAGGMALSSEPEAVALTPVRSLALSPVPVPVPTPASAV
ARAPAASGGVAESSQRSELEAHVGAVSGSEMPRQFPKLNISEVDEQVRLLAEKVFAKVLR
EEDSKDALSLFTVPEDCPIGQKEAKERELQKELAEQKSVETAKRKKSFKMIRSQSLSLQM
PPQQDWKGPPAASPAMSPTTPVVTGATSLPTPAPYAMPEFQRVTISGDYCAGITLEDYEQ
AAKSLAKALMIREKYARLAYHRFPRITSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYC
LDDAPPNLDYLVHMQGGILFVYDNKKMLEHQEPHSLPYPDLETYTVDMSHILALITDGPT
QGWPLQMLEASKLESSMRLNYGLSPSPTCRKTYCHRRLNFLESKFSLHEMLNEMSEFKEL
KSNPHRDFYNVRKVDTHIHAAACMNQKHLLRFIKHTYQTEPDRTVAEKRGRKITLRQVFD
GLHMDPYDLTVDSLDVHAVSELLLQCRQQTAALAGDSAPWKATMIVLAGRWGLCCSFTGG
LAKGSQADRVRIHGPGAQEFLRFHARIDIEDVFRCGHTEGRLVKGRQTFHRFDKFNSKYN
PVGASELRDLYLKTENYLGGEYFARMVKEVARELEESKYQYSEPRLSIYGRSPEEWPNLA
YWFIQHKVYSPNMRWIIQVPRIYDIFRSKKLLPNFGKMLENIFLPLFKATINPQDHRELH
LFLKYVTGFDSVDDESKHSDHMFSDKSPNPDVWTSEQNPPYSYYLYYMYANIMVLNNLRR
ERGLSTFLFRPHCGEAGSITHLVSAFLTADNISHGLLLKKSPVLQYLYYLAQIPIAMSPL
SNNSLFLEYSKNPLREFLHKGLHVSLSTDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLC
EIARNSVLQSGLSHQEKQKFLGQNYYKEGPEGNDIRKTNVAQIRMAFRYETLCNELSFLS
DAMKSEEITALTN

>gi568815587r:10414919_10634158|GENSCAN_predicted_CDS_1|2922_bp
tgcccagcagccccgctccgctctgcccagcgcgtcccctttgctccagccctgcggccg
tccctttcggccggcggcatggccctgtcgtccgaacccgaggcggtggcgctgactccg
gtccgatcccttgccctgtcccctgttcctgtccctgtccctacccctgcctctgcggtg
gcccgagccccagcggcctcaggaggagtggcagagtccagccagcgctcggagctggag
gcccacgtgggagcagtgagcggctctgagatgccgcggcagtttcccaagctgaacatc
tctgaagtggatgagcaagtccggctcctggcggagaaggtgtttgctaaagtgctccga
gaagaggacagcaaagatgccctgtccctgttcactgtcccagaggactgccccatcggg
caaaaggaagccaaggagagggagctgcagaaggagctggcagagcagaagtctgtggag
accgcaaaaagaaagaaaagtttcaagatgattcggtcccagtccctgtctctgcaaatg
ccgccacagcaagattggaagggccccccggcagccagtccggccatgtctcccacaacc
cctgtggtcactggagccacttccctgcccacgccagcaccctatgccatgcctgagttc
cagcgggtcaccatcagcggagattactgtgccgggatcactttggaggactatgagcag
gcagccaagagtctggccaaggccctaatgatccgggagaagtatgcgcggctcgcctac
caccgcttcccgcggatcacatcccagtacctgggtcatccgcgggcggatactgcacct
ccggaagagggccttccagacttccaccctcctccactgccccaggaagacccctactgc
ctggatgatgcaccccccaacctggattacttggtccacatgcaggggggcatcctcttt
gtgtatgataacaagaagatgctggagcaccaggagccgcacagcctaccctaccccgac
ctggagacctacacggtggacatgagccacatcctggctctcatcaccgatggccccacc
cagggttggcccctgcagatgctggaggcctccaaactggagagctcgatgcgactcaac
tatggtctctccccatctccaacttgcaggaaaacctattgtcaccggcgactgaacttt
ctggaatccaagttcagccttcatgagatgttaaacgaaatgtccgagttcaaagagttg
aagagtaacccccaccgggacttctataacgtgagaaaggtggacacacacatccatgcg
gccgcctgcatgaaccaaaagcatctgctgcgcttcatcaagcacacataccagacggag
cctgacaggactgtggcagagaagcggggccggaagatcaccctgcggcaggtgtttgac
ggcctgcacatggacccctacgacctcactgtggactcactggatgtccacgcggtgagt
gagcttctgctccagtgccgccagcagacagcagccctggctggggactcagccccctgg
aaagccaccatgattgtgcttgccgggaggtggggcctctgctgttccttcacagggggc
cttgccaaaggatcccaagctgaccgagtgaggatccatggtcctggtgctcaggagttt
ctaaggtttcatgcaagaattgacatagaagatgtctttcggtgtggccatacagaaggc
cgcctcgtaaagggccggcagacattccaccgctttgacaagttcaactccaaatacaac
cctgtgggggccagtgagctgcgtgacctgtatttgaaaactgaaaactatctgggagga
gagtactttgctcggatggtcaaggaggttgcccgggagctggaggagagcaagtaccag
tactcagagccacggctctccatctacggccgcagtcctgaggagtggcccaacctggcc
tactggttcatccagcacaaggtctactctcccaacatgcgctggatcatccaggtgccc
cggatttatgacatatttaggtcaaagaagctgctgccaaactttgggaagatgctggag
aacatcttcctgccccttttcaaggccactatcaacccccaagatcatcgagagcttcac
ctcttccttaaatatgtgacggggtttgacagcgtggatgatgagtccaagcacagcgac
cacatgttttccgacaagagcccaaacccggacgtctggaccagtgagcagaacccaccc
tacagctactacctgtactacatgtatgccaacatcatggtgctcaacaacctccgcagg
gagcgcggcctgagcacgttcctgttccggccgcactgtggggaagccggctccatcacc
cacctggtgtctgccttcctcactgctgacaacatttcccacgggctgctcctcaagaag
agtccggtattgcagtatctctactaccttgctcagatccccattgccatgtctcctctt
agcaacaacagtttgttcctcgaatattccaagaaccctctgagggaattcctacacaag
ggactgcatgtttctctttccaccgatgaccccatgcagttccactacacgaaggaagca
cttatggaagaatatgccattgcagctcaagtgtggaagctgagcacctgcgacctgtgt
gagatcgccaggaacagcgtgctgcagagcggcctctcgcatcaggaaaagcaaaagttt
ctgggacaaaattattataaagaaggacctgaaggaaatgatattcgaaagacaaatgtg
gctcagatccggatggcattccgatatgagaccttatgcaatgagctcagcttcctgtct
gatgctatgaaatcagaagagatcaccgccttgaccaactag

>gi568815587r:10414919_10634158|GENSCAN_predicted_peptide_2|497_aa
MARCFSLVLLLTSIWTTRLLVQGSLRAEELSIQVSCRIMGITLVSKKANQQLNFTEAKEA
CRLLGLSLAGKDQVETALKASFETCSYGWVGDGFVVISRISPNPKCGKNGVGVLIWKVPV
SRQFAAYCYNSSDTWTNSCIPEIITTKDPIFNTQTATQTTEFIVSDSTYSVASPYSTIPA
PTTTPPAPASTSIPRRKKLICVTEVFMETSTMSTETEPFVENKAAFKNEAAGFGGVPTAL
LVLALLFFGAAAGLGFCYVKRYVKAFPFTNKNQQKEMIETKVVKEEKANDSNPNEESKKT
DKNPEESKSPSKTTKNSRALFYLCSHTTTTVINSITKELNDKRTAKVASGQEKHLLFEVQ
PGSDSSAFWKVVVRVVCTKINKSSGIVEASRIMNLYQFIQLYKDITSQAAGVLAQSSTSE
EPDENSSSVTSCQASLWMGRVKQLTDEEECCICMDGRADLILPCAHSFCQKCIDKWQQTS
TVHSPGVVDPYPNRQQK

>gi568815587r:10414919_10634158|GENSCAN_predicted_CDS_2|1494_bp
atggccaggtgcttcagcctggtgttgcttctcacttccatctggaccacgaggctcctg
gtccaaggctctttgcgtgcagaagagctttccatccaggtgtcatgcagaattatgggg
atcacccttgtgagcaaaaaggcgaaccagcagctgaatttcacagaagctaaggaggcc
tgtaggctgctgggactaagtttggccggcaaggaccaagttgaaacagccttgaaagct
agctttgaaacttgcagctatggctgggttggagatggattcgtggtcatctctaggatt
agcccaaaccccaagtgtgggaaaaatggggtgggtgtcctgatttggaaggttccagtg
agccgacagtttgcagcctattgttacaactcatctgatacttggactaactcgtgcatt
ccagaaattatcaccaccaaagatcccatattcaacactcaaactgcaacacaaacaaca
gaatttattgtcagtgacagtacctactcggtggcatccccttactctacaatacctgcc
cctactactactcctcctgctccagcttccacttctattccacggagaaaaaaattgatt
tgtgtcacagaagtttttatggaaactagcaccatgtctacagaaactgaaccatttgtt
gaaaataaagcagcattcaagaatgaagctgctgggtttggaggtgtccccacggctctg
ctagtgcttgctctcctcttctttggtgctgcagctggtcttggattttgctatgtcaaa
aggtatgtgaaggccttcccttttacaaacaagaatcagcagaaggaaatgatcgaaacc
aaagtagtaaaggaggagaaggccaatgatagcaaccctaatgaggaatcaaagaaaact
gataaaaacccagaagagtccaagagtccaagcaaaactaccaaaaactcccgagccttg
ttttacctctgctctcacaccaccacaacagtcatcaactcaataacaaaagaactcaat
gacaaaagaacggctaaagtggcttctggccaggaaaaacatcttctctttgaggtacaa
cctgggtctgattcctctgctttttggaaagtggttgtacgggtggtctgtaccaagatt
aacaaaagcagtggcattgtggaggcatcacggatcatgaatttataccagtttattcaa
ctttataaagatatcacaagtcaagcagcaggagtattggcacagagctccacctctgaa
gaacctgatgaaaactcatcctctgtaacatcttgtcaggctagtctttggatgggaagg
gtgaagcagctgaccgatgaggaggagtgttgtatctgtatggatgggcgggctgacctc
atcctgccttgtgctcacagcttttgtcagaagtgtattgataaatggcagcagaccagt
actgtccacagcccaggggttgtggacccctaccccaacagacagcaaaaataa

>gi568815587r:10414919_10634158|GENSCAN_predicted_peptide_3|868_aa
GPPAAGVSCSPTPTIVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDP
AGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLQKGDEADVSSPHPGEPLLSLGKFLAG
FGLQVPFSCLFDKPRAEALSFHIVHSYPIHTYTNGPLGKNVPKGLADRKQNDQRKVSQGR
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKAIEEEESKSGLDVMPNISDVLLRKLRVHR
SLPGSAPPLTEKEVEMYMDTALGMVEIKQAFKSDSLRLNPGSVTPCHLEQVNDRSGLGLF
THKQNVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEKELENFKASITVIVEPDSSA
SLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLK
RTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKF
NALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDCEASAPALT
LSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEE
EEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADG
PLGRSTCSAAQRDSWWSSGLQHEQPTEQ

>gi568815587r:10414919_10634158|GENSCAN_predicted_CDS_3|2607_bp
ggtcctcctgccgcaggagtatcttgcagtccaactcccacgattgtcctgactggggat
gccacttcaccagaaggagaaaccgacaaaaacctggccaacagagttcacagtccccac
aagaggctttctcaccgacacttgaaggtgtccactgcctccctgacatctgtggacccc
gcggggcacatcattgacctggtgaatgaccagctgccagacatcagcatctcagaggag
gacaagaagaaaaacctggcgctgctggaagaagccaagttgcagaagggggatgaggcc
gacgtctcttcacctcaccctggcgagcctctcctatcccttgggaaattcttggctggt
tttggattgcaggttccattttcctgtctgtttgacaaacctcgggcagaagccctctcc
ttccacatcgtccactcataccccatacacacttatacaaatgggccccttggcaagaac
gtccccaaagggctagctgacaggaagcagaatgaccagaggaaagtgtctcagggcagg
ctggctcctcgtcctcctccagttgagaagtccaaagagattgcaatagaacaaaaggaa
aacttcgatcccctccagtaccccgagaccacacccaaaggcctagctcctgttacaaac
agcagtgggaaaatggccctgaacagccctcagcctggccccgtggagagcgagctgggg
aagcagctcttgaaaacgggctgggagggcagccctctgccgagaagtccaacccaggat
gcggcaggagtgggtcccccagcctcccaggggagaggcccagctggagagccgatgggg
cccgaggctggctccaaagctgagcttccacccactgtgtcccggcccccgctgctgcga
gggctctcctgggacagtggccctgaagaacctggcccccggctgcagaaagtgcttgcc
aagctgccactggcagaggaagaaaagcgttttgcaggcaaggccggcggcaagctggcc
aaggcccctggtctcaaagactttcagatacaagtgcagcccgtgcggatgcagaaactg
accaagctccgagaggagcacatcctgatgagaaatcagaacttagtggggctcaagctt
ccagaccttagtgaagcagctgagcaggaaaaagctattgaggaagaagagtcaaagagt
ggcttagatgtcatgcctaatatttctgatgtgctgctgcgcaaactgcgggtccacagg
agtctccctggaagtgcccctccactcactgaaaaggaagttgagatgtatatggacaca
gctctcggcatggtggaaataaaacaggctttcaaatcagacagtctgaggttaaatcct
ggctccgttactccgtgtcaccttgaacaagttaatgaccgttctggtcttggcctcttt
acccataaacagaacgtgtttgtgcaactgtccttggcctttagaaatgacagctacact
ctggaatctagaattaaccaggctgaaagggaacgcaacctgacagaggagaacactgag
aaagaactggaaaacttcaaagcttccattacggtaattgtggagcctgattcctcagct
tcactctggcaccactgtgagcaccgggaaacctaccagaagttgctggaggacatcgct
gtcctgcaccgcctggctgcccgcctctccagccgagctgaggtggtaggcgccgtccgc
caggaaaagcgcatgtcgaaagcaacggaagtgatgatgcagtatgtggagaatctaaag
aggacgtatgagaaggaccatgcggagctcatggagtttaaaaagcttgcaaatcagaat
tcaagccgcagctgtggcccctctgaagatggggtccctcgcacggcacggtccatgtcc
ctcacgctgggaaagaatatgcctcgccggagggtcagcgttgctgtggttcctaagttt
aatgccctgaatctgcctggccaaactcccagctcatcatccattccctccttaccagcc
ttgtcggaatcacccaatgggaaaggcagcctacctgtcacttcagcactgcctgcactt
ttggaaaatggaaagacaaatggggacccagattgtgaagcctctgctcctgcgctgacc
ctgagctgcctggaggagcttagtcaggagaccaaggccaggatggaggaagaagcctac
agcaagggattccaagaaggtctaaagaagaccaaagaacttcaagacctgaaggaggag
gaggaagaacagaagagtgagagtcctgaggaacctgaagaggtagaagaaactgaggaa
gaggaaaagggcccaagaagcagcaaacttgaagaattggtccatttcttacaagtcatg
tatcccaaactgtgtcagcactggcaagtgatctggatgatggctgcagtgatgctggtc
ttgactgttgtgctggggctctacaattcctataactcttgtgcagagcaggctgatggg
ccccttggaagatccacttgctcggcagcccagagggactcctggtggagctcaggactc
cagcatgagcagcctacagagcagtag