GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:38:00

Sequence gi568815596r:88023057_88228017 : 204961 bp : 43.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1232   1227    6                               1.05
 1.04 Term -   5529   4728  802  2  1   87   48   325 0.945  21.12
 1.03 Intr -   9877   9852   26  1  2   96   77    15 0.016  -1.98
 1.02 Intr -  32506  32333  174  1  0   87   36    59 0.174   0.74
 1.01 Init -  33724  33671   54  1  0   79   88    58 0.612   4.18
 1.00 Prom -  36958  36919   40                              -3.76

 2.00 Prom +  40795  40834   40                              -4.86
 2.01 Init +  44824  44945  122  0  2   79   80   161 0.833  14.06
 2.02 Intr +  61260  61436  177  0  0   98   94   222 0.983  22.83
 2.03 Intr +  64806  65019  214  0  1   91   54   407 0.998  36.32
 2.04 Intr +  67956  68086  131  2  2   91   89   122 0.997  12.09
 2.05 Intr +  73539  73728  190  0  1   77   81   316 0.991  29.39
 2.06 Intr +  80002  80094   93  0  0   81   94    30 0.861   3.06
 2.07 Intr +  83269  83432  164  0  2   84   42   240 0.827  17.77
 2.08 Intr +  85315  85543  229  1  1  101   65   140 0.487  10.87
 2.09 Term +  87298  87456  159  0  0  109   55   256 0.995  22.34
 2.10 PlyA +  87707  87712    6                               1.05

 3.05 PlyA -  88411  88406    6                               1.05
 3.04 Term -  93645  93502  144  0  0   44   48    89 0.048  -1.59
 3.03 Intr - 101530 101438   93  1  0  106  101   145 0.959  17.76
 3.02 Intr - 103292 103120  173  0  2   24   97   221 0.897  16.26
 3.01 Init - 104961 104895   67  0  1  104  109    94 0.978  14.33
 3.00 Prom - 105352 105313   40                              -3.46

 4.04 PlyA - 105720 105715    6                               1.05
 4.03 Term - 108252 108079  174  0  0   75   33    81 0.005  -0.94
 4.02 Intr - 127320 126799  522  0  0   73  -43   222 0.210   0.75
 4.01 Init - 127576 127418  159  1  0   60   91    71 0.534   4.42
 4.00 Prom - 128324 128285   40                              -2.96

 5.00 Prom + 139635 139674   40                              -3.76
 5.01 Init + 141588 141659   72  2  0   70   46   101 0.483   3.27
 5.02 Intr + 145632 145695   64  2  1   76   52    66 0.592   0.09
 5.03 Intr + 147231 147400  170  1  2  107   54    58 0.587   3.97
 5.04 Intr + 150083 150317  235  1  1   97  101   197 0.908  19.16
 5.05 Intr + 151583 151777  195  0  0   86   75   213 0.987  19.19
 5.06 Intr + 152193 152345  153  1  0   70   85   170 0.998  14.94
 5.07 Intr + 155727 155957  231  1  0  108  110   239 0.972  25.84
 5.08 Intr + 159643 159791  149  2  2   73   96   140 0.975  13.25
 5.09 Intr + 159892 160017  126  0  0   64   86   134 0.988  11.68
 5.10 Intr + 162272 162423  152  1  2   60   92   260 0.986  22.56
 5.11 Term + 162842 163067  226  2  1   88   38   257 0.792  16.95
 5.12 PlyA + 163549 163554    6                               1.05

 6.03 PlyA - 164582 164577    6                               1.05
 6.02 Term - 171722 171645   78  2  0  111   44    64 0.278   2.06
 6.01 Init - 198066 197944  123  0  0   87   87    54 0.450   5.39
 6.00 Prom - 202784 202745   40                              -2.56


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   5563   5556    8  1  2   76   99    11 0.912   0.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_1|351_aa
MDLARWLTPVIPALWEAEDRPRAPSPPGAPRVCEMADQGAARVPRTPHRPPPPERDARAS
EWSAEGRGARLAEEAEKWVLAVLARKSRFVNLMKHSKKTYDSFQDELEDYIKVQKARGLE
PKTCFRKMKGDYLETCGYKGEVNSRPTYRMFDQRLPSETIQTYPRSCNIPQTVENRLPQW
LPAHDSRLRLDSLSYCQFTRDCFSEKPVPLNFNQQEYICGSHGVEHRVYKHFSSDNSTST
HQASHKQIHQKRKRHPEEGREKSEEERSKHKRKKSCEEIDLDKHKSIQRKKTEVEIETVH
VSTEKLKNRKEKKSRDVVSKKEERKRTKKKKEQGQERTEEEMLWDQSILGF

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_1|1056_bp
atggacctggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggacagg
cctcgcgcgcccagcccgccgggcgcgccccgagtgtgcgaaatggccgaccagggcgcg
gcccgagtcccgcgcacccctcaccggccgccgcccccggaaagagacgccagggcttcc
gagtggagtgcggagggaaggggcgctcggcttgcggaggaagccgagaaatgggttctt
gctgtgttggccagaaaatcccgttttgtcaacctaatgaagcattcaaagaagacatat
gactcttttcaagatgaacttgaagattatattaaagtacagaaagccagaggcttagag
ccaaagacttgtttcagaaagatgaaaggggactatttggaaacctgtgggtacaaagga
gaggttaattccagacccacgtatagaatgtttgaccagagactcccatctgaaaccatc
cagacctacccaagatcatgcaatattccacaaacagtggaaaatcggttgcctcagtgg
ttaccagcccatgacagcagattgagactagactctctgagctactgtcagttcacgagg
gactgtttctcagaaaaaccagtacccctgaactttaatcaacaagaatatatttgtggc
tcacatggtgtagaacatagagtttacaagcacttctcctcagataacagtaccagtact
catcaagccagtcacaaacagatacatcagaagaggaaaaggcacccagaggaaggcaga
gaaaaatcagaggaggagcggtctaagcataagagaaaaaaaagctgcgaggaaattgac
ttagacaaacacaagagcatccaaagaaagaaaacagaggtggaaatagaaaccgtacat
gtcagtacagaaaagcttaagaatcgaaaggagaaaaaaagccgagatgtagtctctaag
aaagaggaacgtaagcgtacaaaaaagaaaaaggaacaaggccaagaaaggacagaggag
gaaatgctttgggaccagtctattcttggattttga

>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_2|492_aa
MENVEVFTAEGKGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRC
GQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRVEREGTGLTEGC
LVSVDDLQNHVEHFGEEEQKDLRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLS
DQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGKIELRALGKISEGEELTVSYIDFLNV
SEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGVKDNPKPSQEVVKEMIQFSKDTLEKIDK
ARSEGLYHEVVKLCRECLEKQEPVFADTNIYMLRMLSIVSEVLSYLQAFEEASFYARRMV
DGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHPITKDLE
ASSVLRLVFPSWPELSEDGSAMRVQTEMELRMFRQNEFMYYKMREAALNNQPMQVMAEPS
NEPSPALFHKKQ

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_2|1479_bp
atggagaacgtggaggtcttcaccgctgagggcaaaggaaggggtctgaaggccaccaag
gagttctgggctgcagatatcatctttgctgagcgggcttattccgcagtggtttttgac
agccttgttaattttgtgtgccacacctgcttcaagaggcaggagaagctccatcgctgt
gggcagtgcaagtttgcccattactgcgaccgcacctgccagaaggatgcttggctgaac
cacaagaatgaatgttcggccatcaagagatatgggaaggtgcccaatgagaacatcagg
ctggcggcgcgcatcatgtggcgggtggagagagaaggcaccgggctcacggagggctgc
ctggtgtccgtggacgacttgcagaaccacgtggagcactttggggaggaggagcagaag
gacctgcgggtggacgtggacacattcttgcagtactggccgccgcagagccagcagttc
agcatgcagtacatctcgcacatcttcggagtgattaactgcaacggttttactctcagt
gatcagagaggcctgcaggccgtgggcgtaggcatcttccccaacctgggcctggtgaac
catgactgttggcccaactgtactgtcatatttaacaatggcaaaattgagctccgggcc
ctaggcaagatctcagaaggagaggagctgactgtgtcctatattgacttcctcaacgtt
agtgaagaacgcaagaggcagctgaagaagcagtactactttgactgcacatgtgaacac
tgccagaaaaaactgaaggatgacctcttcctgggggtgaaagacaaccccaagccctct
caggaagtggtgaaggagatgatacaattctccaaggatacattggaaaagatagacaag
gctcgttccgagggtttgtatcatgaggttgtgaaattatgccgggagtgcctggagaag
caggagccagtgtttgctgacaccaacatctacatgctgcggatgctgagcattgtttcg
gaggtcctttcctacctccaggcctttgaggaggcctcgttctatgccaggaggatggtg
gacggctatatgaagctctaccaccccaacaatgcccaactgggcatggccgtgatgcgg
gcagggctgaccaactggcatgctggtaacattgaggtggggcacgggatgatctgcaaa
gcctatgccattctcctggtgacacacggaccctcccaccccatcactaaggacttagag
gcaagtagcgtcttgaggctggtgttcccttcctggcctgagctttctgaggatgggagt
gccatgcgggtgcagacggagatggagctacgcatgttccgccagaacgaattcatgtac
tacaagatgcgcgaggctgccctgaacaaccagcccatgcaggtcatggccgagcccagc
aatgagccatccccagctctgttccacaagaagcaatga

>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_3|158_aa
MSFSGKYQLQSQENFEAFMKAIGLPEELIQKGKDIKGVSEIVQNGKHFKFTITAGSKVIQ
NEFTVGEECELETMTGEKVKTVVQLEGDNKLVTTFKNIKSVTELNGDIITNSPAGASYWL
NEKEEVSLSDTKQGREEWRRPVGEMEKNQHNGNSFSCK

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_3|477_bp
atgagtttctccggcaagtaccaactgcagagccaggaaaactttgaagccttcatgaag
gcaatcggtctgccggaagagctcatccagaaggggaaggatatcaagggggtgtcggaa
atcgtgcagaatgggaagcacttcaagttcaccatcaccgctgggtccaaagtgatccaa
aacgaattcacggtgggggaggaatgtgagctggagacaatgacaggggagaaagtcaag
acagtggttcagttggaaggtgacaataaactggtgacaactttcaaaaacatcaagtct
gtgaccgaactcaacggcgacataatcaccaattctcctgctggtgcttcttattggtta
aatgagaaagaagaagtcagcctttctgacacaaagcagggcagagaagagtggagaagg
cctgtgggagaaatggagaaaaaccagcacaatgggaactccttcagttgcaagtga

>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_4|284_aa
MSELPFTIASKRIKYLGIQLTTDVKDLFKENYKPLLNEIKEDTNKWKNILCSQNWEKTTL
KFIWNQKRARIAKSILSQKNKAGGISLPDFKLYYKATVTKTAWYWYQNRDIDQWNGTEPS
EIMPHIYNYLIFDKPDKNKKWGKDSLFNKWCWENWLAMCRKLKLDPFLTPYTKINSRWIK
DLNVRPKTIKTLEENLGNTIQDVGMVKDFMSKTPKAMATKAKIDKWDTPGKVHLVPTSPE
ASGVGADLLYGEAFMTLLPTPLRRSQKAAVWGMILDICDQGERA

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_4|855_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaacggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattctatgctcacagaattgggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaac
aaagctggaggcatctcgctacctgacttcaaactgtactacaaggctacagtaaccaaa
acagcatggtactggtaccaaaacagagatatagaccaatggaatggaacagagccctca
gaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaacaagaaa
tggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatgtgtaga
aagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaa
gacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaataccatt
caggacgtgggcatggtcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatacaccaggaaaggtgcacctggtccctacttcacctgag
gcctccggggttggtgctgacttgctctatggagaagctttcatgacgctccttcccact
cccctccgtagatcccagaaagcagcagtgtggggcatgatacttgacatttgcgatcaa
ggggagagggcctag

>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_5|590_aa
MAMRIVEALITGVLGPVLLLGEWTNHKGLQARVSVAEGLWERSVEGPSHCEAENPSSGPD
RKPHRTVRDADSGVRTFAARAALLRTGPRAPRPAPRAPRPAPASRIMWYVSTRGVAPRVN
FEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELLPKDELN
DLIDRAFSRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKH
VTVVVGTSGDTGSAAIESVQGAKNMDIIVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGN
SDELDEPIKTVFADVAFVKKHNLMSLNSINWSRVLVQMAHHFFAYFQCTPSLDTHPLPLV
EVVVPTGAAGNLAAGYIAQKIGLPIRLVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAM
DIQVPYNMERVFWLLSGSDSQVTRALMEQFERTQSVNLPKELHSKLSEAVTSVSVSDEAI
TQTMGRCWDENQYLLCPHSAVAVNYHYQQIDRQQPSTPRCCLAPASAAKFPEAVLAAGLT
PETPAEIVALEHKETRCTLMRRGDNWMLMLRDTIEDLSRQWRSHALNTSQ

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_5|1773_bp
atggcgatgcgaattgtggaggctttaatcactggtgtgctgggaccagttctgctgctg
ggagaatggactaatcacaaaggcctgcaggcccgtgtaagtgtggcagagggcttgtgg
gagaggtccgtggaaggtccttcccactgcgaagctgagaaccctagctccggccccgac
cggaagccccaccgcaccgtcagggacgcggactcgggagtgcgcacattcgcagcccgg
gcagccctgctgcgcaccgggcctcgcgccccgcgccccgcgccccgcgccccgcgcccc
gcaccggcctccaggatcatgtggtatgtcagcaccaggggcgtagccccacgggtcaac
tttgagggggccctcttctctggctatgcacctgacgggggcctctttatgcctgaagag
ctcccacagttggacagagggaccctgtgccagtggagcacactctcctatcctggcctg
gtgaaggagctgtgtgccctcttcattggctctgagctccttccaaaagatgaattaaat
gatctgatcgaccgagccttcagcagattccgtcacagagaagtggtccatctgtccagg
ttgaggaatgggctgaacgtgttggagctgtggcatggcgtcacatatgcatttaaggac
ctgtccctgtcctgcacaacacagttcctgcagtacttcctggagaagagggagaagcac
gtcactgtggttgtaggaacatctggggacacaggaagtgctgccattgagagtgttcaa
ggggcaaagaacatggacattatcgttctgctgcccaaaggtcactgcacaaagattcag
gagctccagatgacaacggtgctgaagcagaacgtacatgtgtttggagtggagggaaac
agcgatgagctcgatgagccgatcaagactgtgtttgccgatgtggcttttgtcaagaag
cacaatctgatgagcctgaattcgatcaactggtcccgggtcctggtgcagatggcccat
cacttctttgcttacttccagtgtacgccatccttggacacacatcccctacccctggtg
gaggtggttgtgccaacaggggctgccggtaaccttgcagctgggtacattgctcaaaag
ataggcctgcccatccgtctggtcgtggcagtgaaccgcaatgacatcatccacaggact
gtccagcagggagacttctctctctctgaggctgttaaatcaaccttggcatcagctatg
gacattcaggtgccctacaacatggagagggtgttctggctgctctctggctctgacagc
caggtgacaagagccctcatggagcagtttgaaaggacccaaagtgtgaatctgcccaag
gaactgcacagcaagctttcagaggcagtgacatccgtgtcagtgtcggatgaagccatc
acccagaccatgggccgctgctgggatgagaaccagtacttgctgtgcccccactcagcg
gtggccgtgaactaccattaccagcagatagacaggcagcagcccagcactccccggtgc
tgcctcgcccctgcctctgcagccaagttcccggaagctgtcctggctgctggcctgacc
cctgagactcccgcggagatcgtagccctggagcacaaggagacacgctgcaccctgatg
cggagaggtgacaactggatgctgatgcttcgggacaccattgaggaccttagccgacag
tggaggagtcatgccctcaacacctcccagtag

>gi568815596r:88023057_88228017|GENSCAN_predicted_peptide_6|66_aa
MHPVHWANASDPTCKLPGPVQDQNPAVSTTCAPSSPALLQQATRWLQGLQVALAFTPVAR
GTYGPE

>gi568815596r:88023057_88228017|GENSCAN_predicted_CDS_6|201_bp
atgcacccagtccactgggcaaatgccagcgaccccacctgtaagctgccaggccctgtg
caagatcaaaaccctgcagtctccaccacctgtgcaccaagcagcccagccctgctgcag
caggcgacaaggtggctgcaggggctacaagttgcactggctttcaccccagtggcaaga
ggcacctatggtcctgaatga