GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:32:02

Sequence gi568815581r:35877569_36081420 : 203852 bp : 44.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    137    132    6                               1.05
 1.02 Term -   1071    956  116  1  2  116   47   164 0.817  13.83
 1.01 Init -   2737   2662   76  1  1   88  103   136 0.999  14.36
 1.00 Prom -   2826   2787   40                              -3.26

 2.11 PlyA -   3154   3149    6                               1.05
 2.10 Term -  17813  17745   69  2  0  105   47    53 0.157   0.84
 2.09 Intr -  29118  29011  108  0  0   57   99    41 0.072   2.58
 2.08 Intr -  32170  31890  281  2  2   33  105   114 0.647   4.80
 2.07 Intr -  32664  32501  164  2  2   47   76    95 0.308   3.82
 2.06 Intr -  37699  37581  119  1  2   59   50    88 0.271   1.36
 2.05 Intr -  42704  42595  110  0  2   55   44   102 0.406   2.50
 2.04 Intr -  47204  47036  169  2  1   39   66    93 0.800   1.72
 2.03 Intr -  48069  47947  123  0  0   65   92    81 0.991   6.98
 2.02 Intr -  52687  52508  180  1  0   74   98    83 0.967   7.96
 2.01 Init -  53159  53064   96  2  0   91   58    96 0.970   7.21
 2.00 Prom -  53242  53203   40                              -7.66

 3.00 Prom +  54336  54375   40                              -3.86
 3.01 Init +  54583  54601   19  0  1   81  117     6 0.255   3.24
 3.02 Intr +  57237  57367  131  1  2   73   97    13 0.275   1.11
 3.03 Term +  58786  58923  138  0  0   85   48   131 0.336   6.76
 3.04 PlyA +  58955  58960    6                               1.05

 4.05 PlyA -  59019  59014    6                              -1.95
 4.04 Term -  59265  59183   83  1  2  129   55    55 0.641   4.16
 4.03 Intr -  60348  60190  159  1  0   97   47   182 0.904  14.96
 4.02 Intr -  61789  61650  140  0  2   80   74   145 0.422  12.41
 4.01 Init -  75638  75493  146  2  2   79   98   123 0.807  11.99
 4.00 Prom -  77572  77533   40                              -3.26

 5.00 Prom +  83762  83801   40                              -6.36
 5.01 Init +  84017  84094   78  1  0   83   39    93 0.687   4.96
 5.02 Intr +  94254  94291   38  2  2   77   67    70 0.540   0.86
 5.03 Term +  95941  96013   73  1  1  111   41    92 0.858   4.18
 5.04 PlyA +  99770  99775    6                               1.05

 6.04 PlyA -  99877  99872    6                               1.05
 6.03 Term - 100163  99998  166  1  1   95   45   220 0.994  15.79
 6.02 Intr - 100716 100575  142  1  1   49   77    73 0.586   1.71
 6.01 Init - 103852 103777   76  1  1   67   89   118 0.911   9.07
 6.00 Prom - 104121 104082   40                              -5.46

 7.04 PlyA - 104553 104548    6                               1.05
 7.03 Term - 106320 106233   88  2  1  120   48   138 0.996  10.13
 7.02 Intr - 106884 106770  115  1  1   97   25   129 0.912   7.01
 7.01 Init - 109081 109003   79  1  1   76   94   127 0.871  13.36
 7.00 Prom - 113825 113786   40                              -3.86

 8.05 PlyA - 114099 114094    6                               1.05
 8.04 Term - 120292 120199   94  0  1  119   38    65 0.966   1.90
 8.03 Intr - 120823 120712  112  2  1   88  103    84 0.973   9.34
 8.02 Intr - 121357 121298   60  2  0   94   98    11 0.712   1.41
 8.01 Init - 123924 123849   76  0  1   65  101   119 0.970  10.19
 8.00 Prom - 124582 124543   40                              -4.66

 9.08 PlyA - 125902 125897    6                               1.05
 9.07 Term - 130847 130636  212  0  2   96   44   129 0.972   6.76
 9.06 Intr - 131035 130957   79  1  1   79   93    34 0.411   2.12
 9.05 Intr - 132063 132022   42  0  0  104   63    31 0.157   0.64
 9.04 Intr - 135740 135683   58  1  1  113   41    48 0.248   1.49
 9.03 Intr - 136341 136176  166  1  1  102   53   154 0.932  12.32
 9.02 Intr - 136825 136766   60  2  0  116   98    30 0.968   5.51
 9.01 Init - 140329 140254   76  1  1   65  113   104 0.962   9.94
 9.00 Prom - 141811 141772   40                              -7.26

10.03 PlyA - 142196 142191    6                               1.05
10.02 Term - 143337 142430  908  1  2  -29   45   349 0.544  11.36
10.01 Init - 145092 144588  505  0  1   74    0   254 0.428  10.35
10.00 Prom - 146902 146863   40                              -5.16

11.00 Prom + 152139 152178   40                              -6.16
11.01 Init + 152380 152419   40  0  1   38  116    24 0.077   0.55
11.02 Intr + 159296 159371   76  0  1   84   72    29 0.040  -0.53
11.03 Intr + 163296 163396  101  0  2   44   95    50 0.089   1.05
11.04 Intr + 169433 169601  169  0  1   24   86   114 0.170   3.80
11.05 Intr + 169781 169948  168  2  0   54   68   112 0.135   4.86
11.06 Intr + 186771 186841   71  0  2   87  113    59 0.000   7.13
11.07 Intr + 192879 192990  112  1  1  108  103    76 0.986  10.54
11.08 Term + 193383 193473   91  0  1  128   55   146 0.999  12.49
11.09 PlyA + 194441 194446    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 186775 186841   67  0  1   86  113   127 0.973  14.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_1|63_aa
MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP
AVV

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_1|192_bp
atgaaggtctccgcggcagccctcgctgtcatcctcattgctactgccctctgcgctcct
gcatctgcctccccatattcctcggacaccacaccctgctgctttgcctacattgcccgc
ccactgccccgtgcccacatcaaggagtatttctacaccagtggcaagtgctccaaccca
gcagtcgtgtga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_2|472_aa
MAELVPFAVPIESDKTLLVWELSSGPTAEALHHSLFTAFSQFGLLYSVRVFPNAAVAHPG
FYAVIKFYSARAAHRAQKACDRKQLFQKSPVKVRLGTRHKAVQHQALALNSSKCQELANY
YFGFNGCSKRIIKLQELSDLEERENEDSMVPLPKQSLKFFCALEVVLPSCDCRSPGIGLV
EEPMDKVEEESGKIAVEYRPSEDIVGVRCEEELHGLIQVCEDKNSGQFQHLKDQQEMIIQ
QLNTPENDELPPVPQEPTTQSPAQTLAPSGSGTLSNSAKLSSSDSIPPMEAEPSPNQQEA
TVQASEPPKNIELSSQQMVPENIFPPTMENSNQLPEPPTEVVAQLPPRYEVTIPTQGQDQ
AQLSTLASVTLQPLDLGFIITPESTTEIELSPTMQETPTQPPKEFVPQPPVYQESHRKRL
DLYQFNRRLQLNLQNLLKMRTPLQYSRRLQGIQSQQYDISGTLTSPSQEASK

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_2|1419_bp
atggcggagttggtaccttttgcggttcccatcgagagtgacaaaaccttgctagtgtgg
gagctgagctccggacccacggccgaggctttgcatcattctctgttcacagcattttct
cagtttggccttctgtattcagtccgggtcttcccaaatgctgcagtggcccatcctggt
ttctatgccgtcattaagttttattctgcaagggctgcccacagagcccaaaaggcatgc
gaccggaagcagctttttcagaaatctccagtcaaggttcgtcttggcaccagacataag
gcagttcaacatcaagcccttgccctgaacagttccaaatgccaagaactggcgaattac
tactttggtttcaatgggtgttccaaaaggatcatcaagcttcaggagctttctgacctt
gaagaaagggaaaatgaagatagcatggtgccacttccgaagcaaagcctgaagttcttc
tgtgctttagaagtggtgttgccatcctgtgattgcaggagtcctggcattggcttggtg
gaggagcctatggataaggtggaggaagaaagtggtaaaatagctgtggagtacagaccc
agtgaagacatcgtaggtgtcagatgcgaagaagaactacacggtttaattcaagtatgt
gaagataaaaactcagggcagtttcagcatttgaaagaccagcaagaaatgattattcag
cagctaaatacccctgaaaatgatgaacttcctccagtccctcaagagcccacaactcag
tcaccagctcagactttagctccctcaggaagtggaaccctctctaactcagcaaaactt
tccagctcagactccataccccctatggaggcagagccttctccaaaccagcaggaggcc
acagttcaggcttcagagccccccaagaatatagaactttcaagccagcagatggtccca
gagaatatatttcctccaaccatggagaactcaaatcaacttccagaaccacctacggag
gttgtagctcaacttccacctcgttatgaggtgacaattccaacacaaggtcaggatcaa
gctcagctttcaacactggccagtgtcacacttcaacctttggacctggggtttatcatc
actccagaatccactacagaaattgaactttctccaaccatgcaggagaccccaactcag
cctcctaaggaatttgtaccccaacctccagtatatcaagagagtcatcggaagagactg
gacctttaccagttcaacaggagacttcagctgaatctccagaacctactaaagatgaga
acccctctccaatacagtaggaggctgcagggtatacagtctcagcagtacgacatatca
gggacgctaacttctcccagccaagaagcaagcaaatga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_3|95_aa
MGIVGSGGILSASRRVAGLNSATSILPCGEKRHGSCLTLSNSSTHMTQFLTVEQRKSAER
EVKQMHQEKLKPAMDSVLTISSPGSMLFLRPSCSP

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_3|288_bp
atgggcatagtgggctccggcggcatcctgtcagccagtagaagagtggccggcctgaac
agtgcaacctccattctaccctgcggagaaaaaagacatggttcttgcctcacactcagt
aactcttccacacacatgacccagttcttgactgtggagcagagaaagtctgcggagaga
gaagtgaagcaaatgcaccaagagaagctgaaacctgccatggacagtgtgctgacaatt
tccagccctggttccatgctcttcctgaggcccagctgcagcccttga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_4|175_aa
MRKNQCKNAENSKNQNASSPPNDRNTAPARAQNWMENEIDKLTEVGFRRMTKALLIYLVS
SFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNISKINENADGSFD
YGLFQINSHYWCNDYKSYSENLCHVDCQDLLNPNLLAGIHCAKRIVSGARGMNNW

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_4|528_bp
atgaggaaaaaccaatgcaaaaacgctgaaaattccaaaaaccagaatgcctcttctcct
ccaaatgatcgcaacaccgctccagcaagggcacaaaactggatggagaatgagattgac
aaattgacagaagtaggcttcagaaggatgacaaaggcgctactcatctatttggtcagc
agctttcttgccctaaatcaggccagcctcatcagtcgctgtgacttggcccaggtgctg
cagctggaggacttggatgggtttgagggttactccctgagtgactggctgtgcctggct
tttgtggaaagcaagttcaacatatcaaagataaatgaaaatgcagacggaagctttgac
tatggcctcttccagatcaacagccactactggtgcaacgattataagagttactcggaa
aacctttgccacgtagactgtcaagatctgctgaatcccaaccttcttgcaggcatccac
tgcgcaaaaaggattgtgtccggagcacgggggatgaacaactggtga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_5|62_aa
MKNQIEKQYDIDETQKRTDRNFQENKILYQKLAVVTAALPLNSDSLALTLVLAKDFETSC
RI

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_5|189_bp
atgaagaatcaaatcgagaaacaatatgacatagatgaaacacagaagagaactgacagg
aacttccaggagaacaagatcctgtaccagaagctggcagttgtcacagcagccctgcct
ttgaactctgactccctggctttgaccctggtgctggctaaggactttgaaacttcttgc
cgcatctga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_6|127_aa
MKVSEAALSLLVLILIITSASRSQPTCNVIPSEVPEWVNTPSTCCLKYYEKVLPRRLVVG
YRKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQ
PQLLNSQ

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_6|384_bp
atgaaggtctccgaggctgccctgtctctccttgtcctcatccttatcattacttcggct
tctcgcagccagccaacttgcaatgtgattccttcagaagttcctgagtgggtgaacacc
ccatccacctgctgcctgaagtattatgagaaagtgttgccaaggagactagtggtggga
tacagaaaggccctcaactgtcacctgccagcaatcatcttcgtcaccaagaggaaccga
gaagtctgcaccaaccccaatgacgactgggtccaagagtacatcaaggatcccaaccta
cctttgctgcctaccaggaacttgtccacggttaaaattattacagcaaagaatggtcaa
ccccagctcctcaactcccagtga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_7|93_aa
MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_7|282_bp
atgaagatctccgtggctgccattcccttcttcctcctcatcaccatcgccctagggacc
aagactgaatcctcctcacggggaccttaccacccctcagagtgctgcttcacctacact
acctacaagatcccgcgtcagcggattatggattactatgagaccaacagccagtgctcc
aagcccggaattgtcttcatcaccaaaaggggccattccgtctgtaccaaccccagtgac
aagtgggtccaggactatatcaaggacatgaaggagaactga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_8|113_aa
MKVSVAALSCLMLVAVLGSQAQFTNDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ
SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLKPYSI

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_8|342_bp
atgaaggtctccgtggctgccctctcctgcctcatgcttgttgctgtccttggatcccag
gcccagttcacaaatgatgcagagacagagttaatgatgtcaaagcttccactggaaaat
ccagtagttctgaacagctttcactttgctgctgactgctgcacctcctacatctcacaa
agcatcccgtgttcactcatgaaaagttattttgaaacgagcagcgagtgctccaagcca
ggtgtcatattcctcaccaagaaggggcggcaagtctgtgccaaacccagtggtccggga
gttcaggattgcatgaaaaagctgaagccctactcaatataa

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_9|230_aa
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH
AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
GLNLKAGIEFQTKKEGEHTDGKVQELGQALLGSGPMVASKGPCLTSWKNQVIVQEDLNDG
ECGDFNELWMWLLWDEWGAGEWMEWEDDLPLEFSHPAADLLFNCPQPNFS

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_9|693_bp
atgaaggtctccgtggctgccctctcctgcctcatgcttgttactgcccttggatcccag
gcccgggtcacaaaagatgcagagacagagttcatgatgtcaaagcttccattggaaaat
ccagtacttctggacatgctctggaggagaaagattggtcctcagatgaccctttctcat
gctgcaggattccatgctactagtgctgactgctgcatctcctacaccccacgaagcatc
ccgtgttcactcctggagagttactttgaaacgaacagcgagtgctccaagccgggtgtc
atcttcctcaccaagaaggggcgacgtttctgtgccaaccccagtgataagcaagttcag
ggcctcaacctgaaggctggaattgagtttcagacaaaaaaggagggggaacacacagat
gggaaggtgcaggagctggggcaagcacttttgggctctggccccatggtagcatccaaa
ggtccttgtctgacatcctggaagaatcaggtcatcgttcaagaagacttgaacgatggt
gaatgtggagattttaatgagttatggatgtggctcttatgggatgaatggggagctgga
gaatggatggagtgggaagatgatcttcccttggagttcagccatcccgcggctgatctc
ctcttcaactgtccccagccgaacttctcctga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_10|470_aa
MKENLCKKAENSKNQNASSPPKDHNSSPAREQNWMENEFDESTEVGFRRWVLTNSSKLKE
HVVTQCKEAKNLDKRLQELLTRIASLEKSINDLIELKNTARELREAYTSINSRIDQAEER
ISETEDHLNEIKHEDKIREKRMKRNEQSLQEIWDYVKRPNLHLICVPEKLRIKKLTQNCT
TTWKLNNLLLNDYWVNNKVKAEINKFFETNGNKDTTYQNLWDTAKVVFRGKFIALNVHIR
KWERSKIDTLTSQLKELEKQEQTNSKANRRQEITKIRAELKEIETQKTLQKINESRCWFF
EKINKIDRLLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTAIREYDKHLYANKPENLE
EMDKFLDTYTLPRLNQEEVESLNRPITSSEIEAVIDSLPTKKSTGPDGFTAEFYQRYKEE
LVPFLLKLFQSTEKEGLLPNSFYEASIILIPKPGKDKTTTTTKEISGQYP

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_10|1413_bp
atgaaggaaaacctttgcaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcgccagcaagggaacaaaactggatggagaatgagtttgat
gaatcgacagaagtaggcttcagaaggtgggtactaacaaactcctccaagctaaaggag
catgttgtaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgcta
actagaatagccagtttagagaagagcataaatgatctgatagagctgaaaaacacagca
cgagaacttcgtgaagcatacacaagtatcaatagccgaattgatcaagcagaagaaagg
atatcagagactgaagatcaccttaatgaaataaagcatgaagacaagattagagaaaaa
agaatgaaaaggaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaac
ctacatttgatttgtgtacctgaaaaactcaggattaagaaactcactcaaaactgcaca
actacatggaaactgaacaacctgctcctgaatgactactgggtaaacaacaaagttaag
gcagaaataaataagttctttgaaaccaatgggaacaaagacacaacgtaccagaatctc
tgggacacggcaaaagtagtgtttagagggaaatttatagcactaaatgtccacattaga
aagtgggaaagatccaaaattgacaccctaacatcacaattaaaagaactagagaagcaa
gagcaaacaaattcgaaagctaacagaagacaagaaataactaagatcagagcagaactg
aaggagatagagacacaaaaaaccctgcaaaaaatcaatgaatccaggtgctggtttttt
gaaaagattaacaaaatagatagactgctagccagactaataaaaaagaaaagagagaag
aatcaaatagacacaataaaaaatgataaaggggatatcaccactgatcccacagaaata
caaactgccatcagagaatacgataaacacctctatgcaaataaaccagaaaatctagaa
gaaatggataaattcctagacacatacaccctcccaagactaaaccaggaagaagttgaa
tccctgaatagaccaataacgagttctgaaattgaggcagtaattgatagcctaccaacc
aaaaaaagcacaggaccagatggattcacagccgaattctaccagaggtacaaagaggag
ctggtaccattccttctgaaattattccaatcaacagaaaaagagggactcctccctaac
tcattttatgaggccagcatcatcctgataccaaaacctggcaaagacaaaacaacaaca
acaacaaaggaaatttctggccaatatccctga

>gi568815581r:35877569_36081420|GENSCAN_predicted_peptide_11|275_aa
MFAKLTSEEKGDKGMFRYTNTHHCVTTAYSILYSSMLHRPCRGLIPVADVFLDPHLAGVG
IDLSSLLCGGSNERRSKLPVNGHDPNGKLREDSQDLSENPWEEAGAQERKAARVWQTLTY
EELGVPWKRSYLKQQMPYLLFTHYGPLPCQGTSALTLHYQIPCKHTPELTLNLAPTGDQW
VPGELIMKGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQC
PKPGVILLTKRGRQICADPNKKWVQKYISDLKLNA

>gi568815581r:35877569_36081420|GENSCAN_predicted_CDS_11|828_bp
atgtttgctaagttgacaagtgaggaaaagggagacaaaggtatgtttaggtacacaaat
actcaccactgtgttacaactgcctacagtattctgtacagtagcatgctgcacagacct
tgccggggtttaattccagttgctgatgtattcctggacccacaccttgctggagttggc
atagacctttccagtctcctctgtggaggaagcaatgaaagaagatcgaagttacctgtt
aatggtcatgatccaaatggaaaactgagggaagacagccaggacctgtcagagaaccca
tgggaagaagctggggcacaagaaaggaaagcagcaagagtctggcagacattgacctat
gaggaacttggggtcccatggaaaaggtcctacctgaaacagcagatgccatacttgttg
ttcacccattatgggccactgccctgccagggaacctcggcccttacgttgcattaccag
atcccctgcaaacatactccagaactcactctgaatttggcacccacaggggatcagtgg
gtccctggagagctcatcatgaagggccttgcagctgccctccttgtcctcgtctgcacc
atggccctctgctcctgtgcacaagttggtaccaacaaagagctctgctgcctcgtctat
acctcctggcagattccacaaaagttcatagttgactattctgaaaccagcccccagtgc
cccaagccaggtgtcatcctcctaaccaagagaggccggcagatctgtgctgaccccaat
aagaagtgggtccagaaatacatcagcgacctgaagctgaatgcctga