GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:24:18

Sequence gi568815591f:78251903_78458611 : 206709 bp : 37.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2532   2527    6                               1.05
 1.03 Term -   2775   2678   98  1  2   91   39    50 0.382  -2.45
 1.02 Intr -   4679   4041  639  0  0  131   94   663 0.782  62.30
 1.01 Init -  18465  17829  637  0  1   75   28   180 0.223   6.25
 1.00 Prom -  18969  18930   40                              -7.75

 2.00 Prom +  19201  19240   40                              -9.75
 2.01 Init +  19364  19483  120  1  0   34   10   171 0.247   4.14
 2.02 Intr +  22285  22485  201  0  0   65   24   187 0.214   8.56
 2.03 Intr +  25510  25671  162  0  0   70   94    67 0.278   4.75
 2.04 Intr +  36555  36584   30  2  0  125  103   -21 0.268   0.51
 2.05 Intr +  38627  39165  539  1  2   44  116   211 0.663  10.28
 2.06 Term +  39503  41366 1864  2  1    6   48   691 0.789  41.24
 2.07 PlyA +  42173  42178    6                               1.05

 3.00 Prom +  45605  45644   40                              -3.65
 3.01 Init +  66106  66251  146  0  2   68   98   130 0.241  11.64
 3.02 Intr +  66608  66822  215  2  2    7   77   114 0.445  -0.36
 3.03 Intr +  68060  68287  228  0  0   45   72   126 0.554   3.62
 3.04 Term +  68546  69099  554  0  2   51   48   181 0.324   3.89
 3.05 PlyA +  69131  69136    6                               1.05

 4.07 PlyA -  70419  70414    6                               1.05
 4.06 Term -  75274  75040  235  0  1   52   43   157 0.409   2.41
 4.05 Intr -  77251  77158   94  2  1   76   94    33 0.126   0.80
 4.04 Intr -  92058  91876  183  1  0   37  110   204 0.116  16.34
 4.03 Intr -  93670  93542  129  2  0   13   88   103 0.082   2.55
 4.02 Intr -  94141  94020  122  0  2   84   64   124 0.851   8.82
 4.01 Init -  94567  94515   53  1  2   27   64    48 0.366  -3.02
 4.00 Prom -  97285  97246   40                              -6.55

 5.00 Prom +  97974  98013   40                              -6.65
 5.01 Init + 101022 101071   50  2  2  110   83    40 0.597   6.17
 5.02 Intr + 106374 106716  343  0  1   73   32   130 0.395   0.41
 5.03 Term + 106738 107157  420  0  0   90   38   212 0.573  10.70
 5.04 PlyA + 107532 107537    6                               1.05

 6.03 PlyA - 107912 107907    6                               1.05
 6.02 Term - 115472 115294  179  0  2   67   36   148 0.490   4.37
 6.01 Init - 130877 130871    7  2  1   38  113     0 0.067  -1.36
 6.00 Prom - 131449 131410   40                              -3.35

 7.03 PlyA - 131582 131577    6                               1.05
 7.02 Term - 136515 136314  202  2  1  -20   48   336 0.106  14.68
 7.01 Init - 144642 144629   14  0  2   68  121    19 0.469   2.74
 7.00 Prom - 151582 151543   40                              -3.65

 8.00 Prom + 164839 164878   40                              -4.35
 8.01 Sngl + 171608 171913  306  1  0   49   45   200 0.214   7.42
 8.02 PlyA + 173819 173824    6                               1.05

 9.03 PlyA - 175825 175820    6                               1.05
 9.02 Term - 176704 176630   75  1  0   86   48   102 0.393   2.86
 9.01 Init - 186902 186807   96  2  0   61   89    41 0.042   1.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  91984  91876  109  1  1   97  110   193 0.880  22.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_1|457_aa
MAILPKIIYRLNAIPIKLPLTFFTELEKTTSNFIQNQKRALTAKTILSKKNKTGDIMLSD
FKLYYKATLTQTAWYWYQNRYIDQWNRTEAPEIPPHIYQHLISDKPDKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIETLEENLGNTIQDIVMGKDF
MTKTPKAMATKAKIDKWDLIKGLLHSKRNYHQGDVIVYINEVCVLGHTHADVVKLFQSVP
IGQSVNLVLCRGYPLPFDPEDPANSMVPPLAIMERPPPVMVNGRHNYETYLEYISRTSQS
VPDITDRPPHSLHSMPTDGQLDGTYPPPVHDDNVSMASSGATQAELMTLTIVKGAQGFGF
TIADSPTGQRVKQILDIQGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSL
IIHRGGVFPSRKYHIVDSLFGNGQQTPGICEQHSTKS

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_1|1374_bp
atggccatactgcccaagataatttatagactcaatgctatccccatcaagctaccattg
actttcttcacagaattggaaaaaactacttcaaatttcatacagaatcaaaaaagagcc
ctcacagccaagacaatcctaagcaaaaagaacaaaactggagacatcatgctatcagac
ttcaaactatactacaaggctacattaacacaaacagcatggtactggtaccaaaacaga
tacatagaccaatggaacagaacagaggccccagaaataccaccacatatctaccagcat
ttgatctctgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgttgggaaaactggctagccatatgcagaaagctgaaactggaccccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
gaaaccctagaagaaaacctaggcaataccattcaggacatagtcatgggcaaagacttt
atgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaaggccttctgcacagcaaaaggaactatcatcagggtgatgtcattgtctatattaat
gaagtttgtgtccttggacacactcatgcagatgttgtcaaacttttccagtctgttcct
attggtcagagtgtcaacctggtgttgtgtcgtggctaccctttgccctttgatcctgaa
gaccctgctaacagcatggtgccaccccttgcaataatggagaggccacctccagtgatg
gtcaatggaagacacaactatgaaacatatttggagtacatttctcggacctcacagtca
gttccagatataacagatcggccgcctcattctctgcactccatgccaactgatggtcag
ctagacggcacgtatccaccgcccgtccatgatgacaatgtgtctatggcttcatctggg
gccacccaagctgaacttatgaccttaaccattgtgaaaggtgcccagggcttcggcttc
actattgccgacagtcctacaggacagcgggtgaaacaaatacttgacattcagggatgc
cctggcctgtgtgaaggcgacctcattgttgagatcaaccagcagaatgtacagaacctg
agccatacagaagtagtggatatacttaaggactgtcccattggaagtgaaacttctttg
attatccatcgaggaggtgtttttccttcaaggaagtatcacattgttgattccttgttt
ggaaacggacagcaaacaccaggcatttgtgagcagcactctacaaagtcttag

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_2|971_aa
MLIEPALHPRDEADLIVEDKLFDVLLDSVCQYFIEDFRIESGSSAAGLLEFAGGPLQTLF
AWVSPADAAEQQSLLPVPSSGSFIPEGHLQMPAIALLYEVSVSSYWEGASSTAVTHSKGL
QTFAKCKKLVTFQEGMRCPEQSYPKVQQVLENGVSKRVDSEVPCFNSSGNTINETEREQG
YPGLELSSAPSRPNRHLQNSPPQINRIYILLSTTLHCTYSKIDHTLGSKALLSKCKITEI
ITDSQTTVLSELRIKKLTQKPLSYMETEQLLNDYWVHNEMKAEIKMFFETNENKDTTYQN
LWDTFKAVCRGKFIALNAHKRKQERSKIDTLMSQLKELEKQEQTHSKVSRRPIPSSEIEA
IINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKP
GRDTTEKENFRPISLMNIDAKILNKILANRIQQHIKKLLHHDQVGFIPGMQGWFNICKSI
NVIQHINRTSDKNHTIISIDAEKAFNKIQQLFMLKTLNKLGTNGMYLKIVRAIYDKPTAN
IILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIQGIQLGKEEVKLSLF
ADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINLQKSQAFLYTNNRQTESQIMSELPFT
TASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWRNIPCSWVGRINIVKMAILPK
VTYRFNAIPIKLPMTFFTELEKTILKFRWNQKRAHIAKTILSQKNKAGGIRLPDFKLFYK
ATVTKTARYWYENRDIDQWNRTEPLEIMPHIYNHLIFDKPDKNKQWGKDSLFNKWCWENW
LAICRKLKLDPFLTSYTKINSRWIEDLNVRPKTIETLEENLGNTIQDIGMGEDFMTETPK
AMATKAQIDKWDLIKLKSLCTAKETTIRVNRQPTEWEKLFIVYPSDKGLISRIYKELKQI
YKKKSNHPIEK

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_2|2916_bp
atgttgattgaaccagccttgcatcccagggatgaagccgacttgatcgtggaggataag
ctttttgacgtgctgctggattcggtttgccagtattttattgaggattttcgaattgag
tcaggatcctctgctgcaggtctcctggagtttgctggaggtccactccagaccctgttt
gcctgggtatcaccagcagatgctgcagaacagcaaagtttgttgcctgttccttcctct
ggaagcttcatcccagaggggcacctgcagatgccagccatagctctcctgtatgaggtg
tctgtcagctcctactgggagggggcatccagtacagcagtgacacacagtaaaggcttg
caaacatttgccaaatgcaaaaaattagtaacatttcaagaaggcatgagatgtccagaa
cagagctatccaaaggtgcagcaagttttagaaaatggggttagcaagagagtggattct
gaggttccttgttttaattcttcaggaaatacgatcaatgagacagaaagagaacaagga
tatccaggacttgaactcagctctgcaccaagcagacctaatagacatctacagaactct
ccaccccaaatcaacagaatatacattcttctcagcaccacattgcattgcacttattcc
aaaattgaccacacacttggaagtaaagcactcctcagcaaatgtaaaataacagaaatt
ataacagactctcagaccacagtgctatcagaactcaggattaagaaactcactcaaaaa
ccgctcagctacatggaaactgaacagctcctgaatgactactgggtacataatgaaatg
aaggcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccagaat
ctctgggatacatttaaagcagtgtgtagagggaaatttatagcactaaatgcccacaag
agaaagcaggaaagatctaaaattgacaccctaatgtcacaattaaaagagctagagaag
caagagcaaacacattcaaaagttagcagaagaccaataccaagttctgaaattgaggca
ataattaatagcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattc
taccagaggtacaaggaggagctggtaccattccttctgaaactattccaatcaatagaa
aaagagggaatccttcctaactcattttatgaggccagcatcattctgataccaaagcct
ggcagagacacaacagaaaaagagaattttagaccaatatccctgatgaacatcgatgca
aaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaagaagcttctccac
catgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaatcaata
aatgtaattcagcatataaacagaaccagtgacaaaaaccatacgattatctcaatagat
gcggaaaaggccttcaacaaaattcaacagctgttcatgctaaaaactctcaataaacta
ggtaccaatgggatgtatctcaaaatagtaagagctatttatgacaaacccacagccaat
atcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacaggga
tgccctctctcaccactcctattcaacatagtattggaagttctggccagggcaatcagg
caggagaaagaaatacagggtattcaattaggaaaagaggaagtcaaattgtccctgttt
gcagatgacatgattgtatacttagaaaaccccattgtctcagcccaaaacctccttaag
ctgataagcaacttcagcaaagtctcaggatacaaaatcaatctgcaaaaatcacaagca
ttcttatacaccaataacagacaaacagagagtcaaatcatgagtgaactcccattcaca
actgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctc
ttcaaggagaactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggagg
aacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaag
gtaacttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactattttaaagttcagatggaaccaaaaaagagcccacattgccaagacaatc
ctaagtcaaaagaacaaagctggaggcatcagactacctgacttcaaactattttacaag
gctacagtaacaaaaacagcacggtactggtacgaaaacagagatatagaccaatggaac
agaacagagcccctggaaataatgccacacatctacaaccatctgatctttgacaaacct
gacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactgg
ctagccatatgtagaaagctgaaactggaccccttccttacatcttatacaaaaattaat
tcaagatggattgaagacttaaatgttagacctaaaaccatagaaaccctagaagaaaac
ctaggcaataccattcaggacataggcatgggcgaagactttatgactgaaacaccaaaa
gcaatggcaacaaaagcccaaattgacaaatgggatctaattaaactaaagagcttgtgc
actgcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaacttttt
atagtctacccatctgacaaaggcctaatatccagaatctacaaagaacttaaacaaatt
tacaagaaaaaatcaaaccaccccatcgaaaagtag

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_3|380_aa
MRRNQRKKAENSKNQNASSPPKDHNSSPAREQNWTENEFDKLTEVGFRSDGENGTKLENT
LQDIIQENFPNLARQANIQIQEIQTMPQRYSSRRATSGHITIRFTKVEMREKMLRAAKEK
EIQTAIREYYKHLYTNKLENLEETDKFLDTCTLPSLNQEEFESLNRSITSSEIEAVIDYQ
PKRVQDQMDSQPNFTRGMQDWFNICKSINVIHHISRTNDKKHMIISIDAEKAFDKIQDVL
MLKTLNKLGIDGTYIKIMRVIYDKHTVNIILNGKKLEVLPWKTGTRQGCPLSPLLFNIVL
EVLARAIRQEKETKGIQIGREEVKLSLLADDMMVYLENPMVSAQNLLKLISNFSKVSGYK
INVQKSQAFLYTNNKQTAKS

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_3|1143_bp
atgaggagaaaccagcgcaaaaaggctgaaaattccaaaaaccagaatgcctcttctcct
ccaaaggatcacaactcctcaccagcaagggaacaaaactggacagagaatgagtttgac
aaattgacagaagtaggcttcagaagtgatggggagaatgggaccaagttggaaaacact
cttcaggatattatccaggagaacttccccaacttagcaagacaagccaacattcaaatt
caggaaatacagacaatgccacaaagatattcctcaagaagagcaacctcaggacacata
accatcaggtttaccaaggttgaaatgagggaaaaaatgttaagggcagccaaagagaaa
gaaatacaaactgccatcagagaatactataaacacctctacacaaataaactagaaaat
ctagaagaaacggataaattcctggacacatgcactctcccgagtctaaaccaggaagaa
ttcgaatccttgaatagatcaataacaagttctgaaattgaggcagtaatagactaccaa
ccaaaaagagtccaggaccagatggattcacagccgaattttaccagagggatgcaagac
tggttcaacatttgcaaatcaataaatgtaatccatcacataagccgaaccaatgacaaa
aaacacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaagacgtcctc
atgctaaaaactctcaataaactaggtattgatggaacatatatcaaaataatgcgagtt
atttatgacaaacacacagtcaatatcatactgaatgggaaaaaactggaagtactccct
tggaaaactggcacaagacaaggatgccctctctcaccactcttattcaacatagtactg
gaagttctggccagggcaatcaggcaagagaaagaaacaaagggtattcaaataggaaga
gaggaagtcaaattgtctcttcttgcagatgacatgatggtatatttagaaaaccccatg
gtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtgcaaaaatcacaagcattcctatacaccaataacaaacagacagccaaatca
tga

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_4|271_aa
MNLPHIYPVGYGDFAKLSHINRRTQFENPVLEAKRKLQQHNMPHTELGTKPLQAPGFRVD
SSSWTLPRPKSIRPRAAPERSRSVNDLSYYQRDPAGRPWLFEKPLFTRDASQLKGTFLST
TLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETAEDLHEVTRVHMVNLECH
HLTYYFAGKSNSVRELPAGQGIPSVNRLGSAPMWQELTEVKEVKLEPNITLAGGRMHRSI
LQKSQPLDASQLPFTRQAATANIKKHTIATS

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_4|816_bp
atgaatttacctcacatttatcctgttggatatggggactttgcaaagctcagccacata
aatagaagaacacagtttgaaaatcctgtcctggaagcaaaaaggaagctacagcaacat
aacatgccccacacagaacttggaacaaagcccctgcaggccccaggtttccgagtagac
agctcctcatggacattacctaggcccaaatccatccgcccccgtgctgccccggagagg
tcgcgcagcgtgaatgacttgtcttactatcagcgcgacccagcagggaggccctggctg
ttcgaaaaaccactcttcacccgggatgcatcccagttgaagggaacattcctcagcacc
accctaaaaaagagcaacatgggctttggatttaccatcattggtggagacgagcctgat
gagtttctgcaggtgaaaagtgtgattccggatgggcctgcagcacaggatggaaaaatg
gaaacagctgaggatttgcatgaagtgacaagagtacacatggtaaatcttgagtgtcat
catctaacttactactttgctggaaaatcaaactctgtaagagagctgcctgctgggcaa
ggaatacccagtgtcaacagactgggcagtgctccaatgtggcaggagctgacagaggtg
aaagaggtcaagcttgagccaaatattacactggccggaggaagaatgcacagatccatc
ctacaaaagagccagccactggatgccagccagttaccattcaccagacaagcagccaca
gccaacataaaaaagcatacaattgcaaccagttaa

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_5|270_aa
MAVCTINHVMKHPGPTRWLLKTAERQNLVLSGQGHLVGHPAAILAKWVLLGRKLVVEHHE
GINISGNFWRNKLKYLAFLCKQMSTNPSQGPPAPPFLGPQRIFWWPCRTKWGQAALDHLM
VFYGISLPYDKVVRLKPTRKFASLGCLAHEVGWKYQVVTATMGEKRKEKAKMHYRKKKQL
MRLQKQATKNVEKTNDKYTEVLRPRDSLFETRKDCLFLMLGLAYPSAIATLGYGGAYPSC
ITALGCGGSKGSNIGAMGSLGLKLGAREGP

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_5|813_bp
atggccgtgtgcaccatcaatcatgtcatgaagcacccaggacctacaaggtggctgctg
aagacagcagaaagacagaacctggtgctcagtggccaaggccatcttgtgggccacccg
gcagccatcttggccaagtgggttctgctgggaaggaaactggtggttgagcaccacgag
ggcatcaacatttctggcaatttctggagaaacaaattaaagtatctggccttcctctgc
aagcagatgagcaccaacccttcccaaggcccacccgccccgccattcctgggcccccag
cgcatcttttggtggccttgcagaaccaagtggggccaggctgccctggaccaccttatg
gtgttttatgggatctcactgccctatgacaaggttgtacgactgaagcctacaagaaag
tttgcctccttggggtgcctggctcacgaggttggctggaaataccaggtagtgacagcc
accatgggggagaagaggaaggagaaggccaagatgcactacaggaagaaaaagcagctc
atgcggctgcagaaacaggccacaaagaacgtggagaagacaaatgacaaatacacagag
gtcctaagaccgagggactccctgtttgagaccagaaaagactgtttattcctcatgctt
ggcctggcctacccttctgccattgcgaccttgggatatgggggagcctacccttcctgc
atcaccgccctgggatgtgggggatccaagggcagcaatataggtgccatgggcagcctg
ggacttaagctgggggcaagggaagggccttag

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_6|61_aa
MKAPFKLTSNAGEDLTKTFLLCPNHLTERQDTPVSESYASSLLDHRDVCSASEDLLLVDP
L

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_6|186_bp
atgaaagctcctttcaagctaacttccaatgcaggagaggatttaactaaaacctttctt
ctctgtcctaatcatctaacagagaggcaagacacccctgtgtcagaaagctatgcttca
tcccttcttgatcatcgagatgtgtgttctgcaagtgaagatctgctgctggtagatcct
ttataa

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_7|71_aa
MVKASDFYLPHTLSLDPMSSSFTIPSSPTIAAIMVTTTTDDDDDDDDDDDDDNSGATVTV
LVIIIAVPTLY

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_7|216_bp
atggtgaaggcaagtgatttttacctgccgcacactctaagtttggacccaatgtcttca
tcattcactattccatcaagtcctactattgctgctattatggttactaccactaccgat
gatgatgatgatgacgatgatgatgatgatgatgataacagtggagcaacagtaacagta
ctagtaataatcatagcagtacctactctttattga

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_8|101_aa
MWKQLWNWITGRGWNSLEDSEEDRKTWESLELPRDLLNGFDQKPDNDRDNKVQAEVVSDR
DEELVGNWRVKMTLVMFYQRDCRHFGPALEICGALKLREMI

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_8|306_bp
atgtggaagcaactttggaattggataacaggcagaggttggaacagtttggaggactca
gaagaagataggaaaacgtgggaaagtttggaacttcctagagacttgttgaatggcttt
gaccaaaagcctgataatgacagggacaataaggtccaggctgaggtggtctcagataga
gatgaggaacttgttgggaactggagagtaaagatgactcttgttatgttttaccaaaga
gactgccggcattttggccctgccctagagatttgtggagccttgaagttgagagagatg
atttag

>gi568815591f:78251903_78458611|GENSCAN_predicted_peptide_9|56_aa
MKRWGKIQALEIHVLWRKSISVPCKAELQVQQVFRDEDLDVEDSSMNFLNILFDKP

>gi568815591f:78251903_78458611|GENSCAN_predicted_CDS_9|171_bp
atgaaaagatggggcaaaatccaggctttagaaattcatgttttgtggagaaaatccatt
tctgtgccttgcaaagcagaactacaggtgcagcaagtattccgggatgaggacctggat
gtggaggactctagcatgaattttttaaatatactttttgacaaaccgtga