GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:18:27

Sequence gi568815585f:31852580_32052978 : 200399 bp : 39.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  11184  11223   40                              -3.65
 1.01 Init +  21388  21439   52  0  1   66   70    35 0.096   0.87
 1.02 Intr +  25638  25773  136  1  1   73   72    77 0.268   3.31
 1.03 Intr +  35711  35829  119  2  2   59   34   153 0.073   6.19
 1.04 Intr +  46033  46325  293  2  2    4   53   213 0.261   5.33
 1.05 Intr +  46369  46549  181  0  1   45  -11   117 0.009  -3.98
 1.06 Term +  60113  60246  134  0  2  129   48    99 0.493   7.27
 1.07 PlyA +  62036  62041    6                               1.05

 2.05 PlyA -  62367  62362    6                               1.05
 2.04 Term -  78507  78389  119  1  2   73   41    80 0.800  -0.48
 2.03 Intr -  80966  80909   58  2  1   61   86    85 0.848   3.14
 2.02 Intr -  84036  83858  179  1  2    3   49   196 0.537   5.92
 2.01 Init -  96549  96468   82  0  1   64   70    42 0.080   1.18
 2.00 Prom -  97251  97212   40                              -5.95

 3.00 Prom +  99540  99579   40                              -9.75
 3.01 Init + 100001 100358  358  1  1   77  -12   330 0.818  19.21
 3.02 Intr + 100433 100792  360  0  0   40   12   603 0.009  42.17
 3.03 Term + 104859 105190  332  1  2   59   39   170 0.014   3.03
 3.04 PlyA + 105732 105737    6                               1.05

 4.00 Prom + 117011 117050   40                              -4.65
 4.01 Init + 126111 126243  133  2  1   59   68   114 0.670   6.85
 4.02 Intr + 133651 133789  139  2  1   63   82    86 0.725   4.10
 4.03 Intr + 141902 142178  277  2  1   83   33   168 0.783   7.40
 4.04 Intr + 144035 144129   95  1  2   28  115   112 0.909   5.74
 4.05 Intr + 145582 145719  138  1  0   33   50   145 0.451   3.86
 4.06 Term + 146005 146131  127  1  1   45   51   102 0.598  -1.03
 4.07 PlyA + 148539 148544    6                               1.05

 5.07 PlyA - 148871 148866    6                               1.05
 5.06 Term - 165832 165688  145  0  1  114   37    72 0.382   1.10
 5.05 Intr - 166832 166610  223  0  1   44   93   106 0.226   2.96
 5.04 Intr - 174674 174624   51  0  0  122   98     6 0.581   2.96
 5.03 Intr - 178627 178400  228  2  0   68   15   211 0.687   8.72
 5.02 Intr - 179003 178872  132  0  0   64  101   135 0.964  12.10
 5.01 Intr - 182421 182323   99  1  0   73   87    52 0.450   2.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100433 100824  392  0  2   40   47   596 0.984  44.86
S.002 Sngl + 104900 105190  291  1  0   69   39   193 0.881   7.90
S.003 Sngl - 115608 115393  216  0  0   96   40   153 0.969   6.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:31852580_32052978|GENSCAN_predicted_peptide_1|304_aa
MRKVSAKKIHPEFDEDKELGLINLVPSFHLSCYPFHKGCPFVSHDQDGNTSNESFTVSGM
SPWAEDRGPVLPLVETQQDYREVAQYGHFNCQCRFTGTSTGPDGVESSRKNVQGRELPWS
WGRDSRWHPFCDKAILELLGDRHILTVPKGAACGEEVEIQNPKQSLCTEADGRTHCRSFT
LECAAKGLEVEAPAKRGSRKLLDAAGNSHSPHTGSACARAGTLRPTSLHPILLLPATWMV
ERAQLPMFLSQWTVRKPLTNFVGHGNINPGVGSQMTQVPRFGALSSVYVDTVTSFASLNP
FDLC

>gi568815585f:31852580_32052978|GENSCAN_predicted_CDS_1|915_bp
atgaggaaagtctcagctaaaaaaatccacccagagtttgatgaggataaagagctaggc
ctcattaaccttgtgccatcatttcatctgtcctgttacccgtttcataaaggatgtcct
tttgtgtcccatgatcaagatggaaacacctctaatgagagcttcacagttagtggaatg
agcccctgggctgaagacagaggtccagtcttgccacttgttgaaactcaacaagactac
agagaagtggcacaatacggccacttcaactgccaatgccgcttcactggcactagcact
ggaccagatggtgtggagagcagcaggaagaatgtccagggtagagagctgccctggagt
tggggccgagatagcagatggcaccctttctgtgacaaggctattctagagttgctgggt
gaccgacacatcctgacagtgcccaaaggggctgcttgtggagaggaggttgaaattcaa
aatccaaagcagagtctctgcactgaggcagatggaagaactcactgtagaagcttcacg
ctggagtgtgcagccaagggcttagaggtcgaggcacctgcgaaacgtggaagccggaag
ctccttgatgctgctgggaactcacattctcctcacactggaagtgcttgtgccagggca
gggaccctaagacctacctctctccatcccatcctacttctgccagccacatggatggtg
gagagagcccagctgcccatgttcctctctcagtggactgtgagaaaaccactcacaaat
tttgtgggccatgggaacataaatccaggtgtgggtagccagatgactcaagtccccaga
tttggtgctctctcctctgtttatgtggacacagtgactagttttgcctctctcaatcct
tttgacctctgctga

>gi568815585f:31852580_32052978|GENSCAN_predicted_peptide_2|145_aa
MQKGPNPNTGIKKTSWKRGCQVDPQSQGAGLPHTEGLDKTKNLEILPMLSDAADVLQALL
SEPSRRKCSKNTFSSFAVESHVALIVENRSSCYVTNAYGPLLYAKEVISVQQLNCMQLIP
KHCPPPVVSQSVPEFTLPPPPGILC

>gi568815585f:31852580_32052978|GENSCAN_predicted_CDS_2|438_bp
atgcagaaaggacccaacccaaacactggcatcaagaaaacttcctggaagaggggatgt
caagttgacccccaaagccaaggtgccggcttaccacacaccgaagggctggacaaaacg
aaaaacctggagattcttcccatgctttctgatgccgctgacgttcttcaggctcttcta
tccgaaccctccagaaggaagtgcagcaagaataccttcagtagctttgcagttgaatct
catgttgcactgattgttgagaataggtcttcatgctacgtaaccaacgcatatggacca
cttttatatgctaaagaagtcatctctgttcagcaactcaattgcatgcagttaataccc
aaacactgcccacccccagttgtttctcagtctgtgcctgagttcacgttgccacctcct
cctggaatcctttgctaa

>gi568815585f:31852580_32052978|GENSCAN_predicted_peptide_3|349_aa
MATNFLVGEKIWFHKFKYGDAERRFYEQMNGPVAGASLQEASMILHDIARARENIPKSLA
GSLGPGASSGPSGDHSELVVRIASLEVDNQRDLAERAGEELARPLGHSPADPAHVSHAPT
TMRQHSCGITNEERLQQYAEKKAKKPALVAKSSILLDFKPWDDETDTAHLEACVRFIQPD
GLVRGASKLVPVGYGIWKLQIQRVVEDKVGTDLLEEEITKFEECMQSVDIAAFNKIWPEC
IPTCTNRCVGGREMGKNDFLQEATENENSKSAQIGVVEGEKENSMPEITCLAEREREEEE
EGGGGGGEEGGRGKGKGKGEREKEGRRKKRKRKKRKEGRRGRRRKKQQK

>gi568815585f:31852580_32052978|GENSCAN_predicted_CDS_3|1050_bp
atggctacaaactttctagtaggtgagaagatctggttccacaagttcaaatatggcgat
gcagaaaggagattctacgaacagatgaacgggcctgtggccggcgcctccctccaggag
gccagcatgatcctccatgatattgccagagccagagagaacatcccgaaatccctggcc
ggaagcttaggcccaggggcgtctagcggccccagcggagaccacagcgagctcgtcgtc
cggatcgccagtctggaagtggacaaccagagagacctggctgaacgtgctggagaagag
cttgcccggccactgggccacagccccgcagacccagcacatgtctcccatgcgccaacg
acaatgaggcaacacagctgcggcattaccaatgaggagcggctgcagcagtacgcggag
aagaaggccaagaagcccgcgctggtggccaagtcctccatcctgctggacttcaagcct
tgggacgatgagacggacacggcccacctggaggcctgtgtgcgcttcatccagccggac
gggctggtgcggggggcctccaagctggtgcccgtgggctacggtatctggaagctgcag
attcagcgtgtggtggaggacaaggtggggacagacttgctggaggaggagatcaccaag
tttgaagagtgtatgcagagtgtcgacatcgcagctttcaacaagatctggcctgagtgc
attcccacatgcacaaacaggtgtgtgggaggaagggaaatgggcaagaatgatttcctt
caagaggctactgagaatgaaaactcaaaatctgcacaaataggggtggtggaaggagag
aaagaaaactccatgccagaaataacatgcttagcagagagagagagagaagaagaagaa
gaaggaggaggaggaggaggagaagaggggggaagggggaaggggaaggggaagggagag
agagagaaggaaggaaggagaaagaaaagaaagagaaagaaaagaaaagaaggaagaaga
ggaaggaggagaaaaaaacagcagaaataa

>gi568815585f:31852580_32052978|GENSCAN_predicted_peptide_4|302_aa
MGKELKGHPNQATGNLDSNHGSASKCHYDVGQIADPVVQFSSSGEKIIKARWDAYSKRGH
LNKQALNLENAYESVLGYVPKTDSEVTCPARVLIGPFYRALIGPFYKPLASHRPLIGAFY
NPSYRVLIGAFYKPLASHRVLIGAFNRALIVAFYKPLASHRALIGAFYNPSYRVLIGAFY
NPLCPKLLNVGLRDAHTGRADGKWIGMGDLVTVGRTVPENGVWNYVKKWNLAALPRIREK
GGETEGGKPDKNADKDNESRKSHKAKMKVLIQMGFYLEATGKNPFPDSFRVLEESISLQL
WD

>gi568815585f:31852580_32052978|GENSCAN_predicted_CDS_4|909_bp
atgggtaaagaattgaaggggcatccaaaccaagcaacaggaaatctggattctaatcat
ggttctgcctcaaaatgtcattatgacgtagggcaaatcgcagaccctgtggtccagttt
tcctcatctggagaaaagataattaaggccaggtgggatgcatacagtaaaagagggcac
ctgaacaaacaagcattgaatttggagaatgcctacgagtctgtgctgggctacgttccc
aagacagactcagaagttacctgccctgccagagtgctgattggtccattttacagagca
ctgattggtccattttacaaacctctagctagccacagaccgctgattggtgcattttac
aatcctagctacagagtgctgattggtgcattttacaaacctctagctagccacagagtg
ctgattggtgcatttaacagagcactgattgttgcgttttacaaacctctagctagccac
agagcactgattggtgcgttttacaatcctagctacagagtgctgattggcgcattttac
aatcctctttgtccaaaactgctaaatgttggattgagggatgctcacactggaagagca
gatggaaagtggatagggatgggagacctggtgactgtggggcgcactgttccagagaat
ggtgtttggaactatgttaagaaatggaatctggcagcattgcctaggattagagaaaag
ggtggggagactgaaggagggaagccagataagaatgcagataaagataatgagagcagg
aagtcccacaaggccaaaatgaaggttttgatccagatgggcttttacctggaggctacg
gggaagaatccatttccagactctttcagggtgttggaggaatccatatccttacagttg
tgggactga

>gi568815585f:31852580_32052978|GENSCAN_predicted_peptide_5|292_aa
XEETESDYLTVRSHASAGARDLKPIWPCHFYILGLASYLLDADLPAALGGGGRAAFISGL
SSPETPAAGRPPARLQPARLPVSGPGVLWLLLPLVSVPEINTTAARCGKQSCSLASGCSD
VLKNPIRQPRCSKETQQEDACLGFFFPAFHTHGEDLCLTQLCVPYISVAHNTWYELRNLQ
QYASKGAPPTSDCHWKKEKDSGCPEKKWQGPGVIMKRRRQSTSREPRTETQYDTKSSDKT
AAGTWDDPASYMAPDRKSHFSAIKSTKPPLSPLLTLFLPPAQDCHSYGSLAS

>gi568815585f:31852580_32052978|GENSCAN_predicted_CDS_5|879_bp
natgaggaaactgagagtgattacttaactgtccgaagccatgcaagtgcaggagcaaga
gatctgaagcccatttggccctgccatttttacattctaggacttgcttcttatttgctg
gacgctgatctccctgcagccctcggaggcggcggccgcgctgctttcatttcggggctg
tcatcaccagaaacgccggctgccggccgcccaccagctcggctccagccagcaaggctt
cccgtgagcggcccgggtgtgctctggctgctgcttccccttgtgtctgtccctgaaata
aacacaactgcagcacgctgcggtaagcaaagctgcagccttgcatctggttgcagcgac
gttttgaaaaaccccatccgtcagcctcgttgcagtaaagagactcaacaagaggacgct
tgtctgggctttttcttccctgccttccacacgcatggtgaagacctgtgtcttactcag
ctttgtgttccttacatctctgtagcacacaatacttggtatgaacttaggaacctccaa
caatatgcatccaagggggctcccccaacttctgactgtcactggaagaaagaaaaagac
tctgggtgtccagaaaaaaagtggcagggacctggagtgattatgaaaaggagaagacag
agtacaagcagagaacccaggacagaaactcaatatgatacaaagtcaagcgacaaaaca
gcagcagggacctgggacgaccctgcctcctacatggcaccggataggaagtcccatttt
tctgccatcaaatccacaaagccacctttgtcccctctcctgaccctgtttctgcctcct
gcccaagattgtcactcctatgggtctctggcatcttaa