GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:06:34

Sequence gi568815589r:36239755_36476129 : 236375 bp : 42.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    103     98    6                               1.05
 1.05 Term -    738    341  398  1  2   31   38   156 0.009  -0.85
 1.04 Intr -   6728   6277  452  1  2   64   84   503 0.858  39.52
 1.03 Intr -   9643   9438  206  1  2   70   86   182 0.840  13.28
 1.02 Intr -  19258  18828  431  2  2   92   81   307 0.070  22.91
 1.01 Init -  25469  25220  250  2  1   63   39   340 0.071  24.27
 1.00 Prom -  45947  45908   40                              -4.15

 2.05 PlyA -  45973  45968    6                              -0.45
 2.04 Term -  46744  46448  297  1  0    5   48   240 0.423   5.98
 2.03 Intr -  52972  52875   98  2  2   42   81   150 0.851   8.51
 2.02 Intr -  54397  54256  142  1  1   72   70    66 0.664   2.21
 2.01 Init -  54886  54788   99  1  0   87   53    66 0.693   3.32
 2.00 Prom -  60556  60517   40                              -5.35

 3.02 PlyA -  62008  62003    6                               1.05
 3.01 Sngl -  64216  63743  474  1  0   52   42   645 0.824  52.16
 3.00 Prom -  73317  73278   40                              -2.05

 4.03 PlyA -  74576  74571    6                              -0.45
 4.02 Term -  78550  78308  243  1  0   88   49   161 0.462   7.12
 4.01 Init -  79257  79192   66  0  0   81  116   -12 0.265   2.02
 4.00 Prom -  79842  79803   40                              -8.25

 5.00 Prom +  81575  81614   40                              -1.35
 5.01 Init +  85369  85490  122  0  2   69   41   192 0.672  10.33
 5.02 Term +  87105  87549  445  0  1   20   48   269 0.897   9.82
 5.03 PlyA +  89052  89057    6                               1.05

 6.13 PlyA -  90324  90319    6                               1.05
 6.12 Term - 100060  99931  130  0  1   90   43    37 0.057  -3.93
 6.11 Intr - 105199 105078  122  1  2   72   78   160 0.267  11.77
 6.10 Intr - 111445 111361   85  0  1   76   88    91 0.981   6.80
 6.09 Intr - 113094 112988  107  0  2   89   81    24 0.986  -0.11
 6.08 Intr - 113577 113416  162  0  0   92   86    75 0.983   6.95
 6.07 Intr - 116719 116549  171  1  0  107   86    23 0.895   3.22
 6.06 Intr - 118188 118021  168  0  0   77  100    11 0.544   0.42
 6.05 Intr - 130178 129965  214  1  1   67   87   191 0.591  14.70
 6.04 Intr - 136373 136180  194  2  2   68   96   114 0.450   7.57
 6.03 Intr - 151161 151059  103  2  1   41   41   101 0.002  -0.04
 6.02 Intr - 156863 156704  160  0  1   81   56   100 0.002   4.22
 6.01 Init - 167992 167866  127  1  1   66   44   105 0.176   4.27
 6.00 Prom - 173654 173615   40                              -6.75

 7.06 PlyA - 175053 175048    6                               1.05
 7.05 Term - 176085 175861  225  0  0   38   36   221 0.741   7.70
 7.04 Intr - 184929 184859   71  1  2  139  100    58 0.710  10.08
 7.03 Intr - 198636 198507  130  0  1   17   47   156 0.191   3.75
 7.02 Intr - 230617 230467  151  0  1   80   65   176 0.611  13.74
 7.01 Init - 231039 230969   71  0  2   74   71    76 0.567   5.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -    470    153  318  2  0   71   38   209 0.850   9.92
S.002 Sngl -  25469  25170  300  2  0   63   48   384 0.878  27.44
S.003 Term + 160736 161031  296  0  2   44   48   251 0.889  11.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_1|578_aa
MEENRRTQRLVFISIRTNPGTCRAGTTASLQPDREQQWAPRWIRSTADTLPDPEGWKSAA
GLRLRQTAVVDNERKLSLSGNKHGLGTGWEFPVVEAAAELIIKMREALPCLGHQFTLHQC
LLAVTARVNVRDRCGVAALHDSIVAVLVYEITEGTRGARNPSLGARPKQLPSGKTRASVR
VSPVEEDASGREHKLAGQPRSSSSAAEAMEDGPLVSTLPAPQNTAGKELYFKNLSKRNKQ
IMEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPEFFELDVVVLGSHLIDDYGNTYR
MIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALAL
ATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRIL
LAGCPSYDKLLSAKNKDYMSIIRMWLGMQGWFNVYKSVNVMDHINRIKNHMIISVDAEKA
LNKIQHPFMIKTLSKISIQGTYLNVIKAIYDKPTANVILNGEKLKAFPLRIGTRQGCPLS
PLLFNMVLEVLARAIRQEKKRASKSVKRKSNRHSLLTI

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_1|1737_bp
atggaagagaaccgtagaacccagcgactagtgttcatctcaattaggacgaacccaggc
acttgccgtgcaggaacaacggcaagccttcagcccgatcgggagcagcagtgggcgcct
cgctggatcaggagcacagcagacaccctgccagatccggaggggtggaagtcagcggcg
ggtctgcgactgcggcaaacagcagtggtggacaacgagcgaaagcttagcttgagcggt
aacaaacacggcctcgggactggctgggagttccctgtagtggaggccgccgctgaactg
attataaagatgagagaggctctgccatgccttggtcatcaattcacactccaccagtgt
cttctagcagtcacggcaagggttaacgtcagggaccgctgtggggtggccgcgctacac
gacagtatagttgcggtcctggtttatgaaataactgagggaacaagaggcgcaagaaat
ccctccttgggtgcaagaccaaaacaactacccagcgggaagactcgggcttcagtgcgt
gtgtcgccagtggaggaggacgcttcggggcgggagcacaagctggcaggacagccccgc
agcagctccagcgcggcagaggccatggaagatggtccgctggtcagcaccctgcctgcg
cctcaaaataccgccgggaaggaactctattttaagaacctctcaaaacgaaacaagcaa
atcatggagaagaatggaaataaccgaaagctgcgggtttgtgttgctacttgtaaccgt
gcagattattctaaacttgccccgatcatgtttggcattaaaaccgaacctgagttcttt
gaacttgatgttgtggtacttggctctcacctgatagatgactatggaaatacatatcga
atgattgaacaagatgactttgacattaacaccaggctacacacaattgtgaggggagaa
gatgaggcagccatggtggagtcagtaggcctggccctagtgaagctgccagatgtcctt
aatcgcctgaagcctgatatcatgattgttcatggagacaggtttgatgccctggctctg
gccacatctgctgccttgatgaacatccgaatccttcacattgaaggtggggaagtcagt
gggaccattgatgactctatcagacatgccataacaaaactggctcattatcatgtgtgc
tgcacccgcagtgcagagcagcacctgatatccatgtgtgaggaccatgatcgcatcctt
ttggcaggctgcccttcctatgacaaacttctctcagccaagaacaaagactacatgagc
atcattcgcatgtggctagggatgcagggatggtttaatgtatacaagtcagtaaatgtg
atggaccacataaacagaattaaaaatcacatgatcatttcagtagatgcagaaaaagca
ttaaacaaaatccagcatccctttatgattaaaactctcagcaaaatcagcatacaaggg
acataccttaatgtaataaaagccatctatgacaaacccacagctaatgtaatactgaat
ggggaaaagttgaaagcattccctctgagaattggaacaagacaaggatgcccactctca
ccactcctcttcaacatggtactggaagtcttagccagagcaatcagacaagagaagaaa
agggcatccaaatcagtaaagaggaagtcaaaccgtcactctttgctgacaatatga

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_2|211_aa
MPGHQLLLTTPQGPCAALASPVMGSTYQHPASLGCPGHLKESGPPAALEGGSGKASFTLQ
GACLLNRKAGGFLRLQSEPAEGKPREERKTLNMQKVKEIIDRAKSPLKEEDAKPKPNPDQ
GHNSSILWRLREVRLSIEENLEANRGWFIRLKERSQLYNIKVQGEAASADVEAAASYPED
LAKITDEGGCAKQQIFNVDKTNSFLLDEEAM

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_2|636_bp
atgcccggtcaccagctgctcttaaccacccctcagggaccttgtgctgctcttgcttct
ccagtcatgggctctacctaccagcatccggcctccctgggctgcccaggtcatttgaag
gaatctgggcctccagcagcacttgagggtggctctgggaaagcatccttcactctgcag
ggcgcctgcttgctgaacaggaaagccgggggctttctgaggctgcagtcagaacctgct
gaggggaagcctcgggaagaaaggaaaacactgaacatgcaaaaggtgaaggaaataatt
gaccgagccaagtcccccttgaaggaggaggatgcgaagccaaagcctaatccagaccaa
ggccataactcttcaattctgtggaggctgagagaggtgaggttatctatagaagaaaac
ttggaagctaacagaggctggttcatcagattgaaggaaagaagccagctctataacata
aaagtgcaaggtgaagcagcaagtgctgatgtagaagctgcagcaagttatccagaagat
ctggctaagatcactgacgaaggcggctgcgctaaacaacagattttcaatgtagataaa
acaaacagctttctcttggatgaagaggccatgtag

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_3|157_aa
MSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIK
STNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRP
AKVARKKVEEEDEEDEEEEEKEKDEEDEQRNCLSVSL

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_3|474_bp
atgtccagtaaagagaaatttaaatttggtgaaatggcaaaggcggatgaagtgtgctat
gatcgggaaatgaaggattatggaccagctaagggaggcaagaagaaggatcctaatgcc
cccaaaaggccaccatctggattcttcctgttctgttcagaattccgccccaagatcaaa
tccacaaaccccggcatctctattggagacgtggcaaaaaagttgggtgagatgtggaat
aacttaaatgacagtgaaaagcagccttacgtcactaaggcggcaaagctgaaggagaag
tatgagaaggatgttgttgactgtaagttgaaaggaaagttttatggcgcaaagcgtcct
gctaaagttgcccggaaaaaggtggaagaggaagatgaagaagacgaggaggaagaagag
aaggagaaggacgaggaggatgaacaaagaaactgtttatctgtctccttgtga

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_4|102_aa
MLRQKQTNKQTNQAFLTKSNQKQHWILGKMKNEVHASLTMPLCNKHQLYRRRNLRLCPHC
SYLPTLSISPYSTDWLGETEGYIPGAVNLMVKPSRSSRAASC

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_4|309_bp
atgctcaggcaaaaacaaacaaacaaacaaacaaaccaggcttttctcacaaaatcaaat
cagaagcagcactggattctaggaaaaatgaaaaatgaagtgcatgcttcacttactatg
cccctgtgtaataaacatcagctttaccgaagaagaaacctgaggctgtgtccacactgc
agttatcttcctacactctccatttctccttattctacagattggctgggggaaactgaa
ggatatattcctggtgcagtaaacctgatggtcaaaccttcccggagctccagggcagcc
agctgctag

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_5|188_aa
MDADLAPLPRASADRVIMSCADSPEAELALQISSRERAPVRLVESTPFHPGKGKNENLAS
SQQEEGVERLAPWLIRFRKGFLEEGIPELSQGRRQRREEEDFQAEGNVGPSVSRGTGNRL
TLPECSMPGKGVLAAKAGAIIRSRLRRLLLRRGASNKIGLCPVAGESHLRVWSYGWESGV
KGPRSGCI

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_5|567_bp
atggacgctgacctggccccactcccgagggcctcagcggatagagtcattatgagctgc
gccgatagcccggaagcggaactagcgttgcagatcagcagcagggagcgagcccctgtg
aggttagtggaaagcacacctttccacccagggaagggaaaaaatgagaacttggcaagc
tcacaacaggaggagggtgtagagcgtcttgctccctggcttataagattcaggaaaggt
ttcctggaggaggggataccagaattgagtcaggggagaagacagaggagggaggaagag
gacttccaggcagaggggaatgtggggcccagtgtgtctcggggaactgggaacaggctg
acgctgccagagtgtagtatgccgggcaagggagtcctggcagccaaggctggagccatc
atcaggagcaggttaagaaggctcttgttgcgaaggggagcatctaataagattggactt
tgtcctgtggcaggggagagccatttaagggtttggagctatgggtgggagtcgggggta
aaggggccacgatcaggttgtatttga

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_6|580_aa
MKLLEHTVELKVLSVLRNRTSKSVASKSIGYSRPSSGGLLPQVFSPGPALKNAIRDFEYP
CSTLSKSFQRTLLPENKSQGNRFVLGPVIELFSKERISELTPAEKVTNRYLGNRKDVVFL
GCAVLPPTVFSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHH
FSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPP
NVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQ
QVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHP
PHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFL
THDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGP
TFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLQI
VLAQFAELMLQKCIGIQNDQPKKHKFSLGVPHHMYIRTIH

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_6|1743_bp
atgaagctgctggagcatacagttgagctcaaggtgctgtctgttctccggaacagaaca
agcaagagtgtggcttcaaagagtataggttacagcaggccatctagtggaggcctgttg
cctcaggtgttctctcctggaccagctttgaagaatgccatccgggactttgagtacccc
tgctccacactgtcaaaatcctttcagagaactctgctcccagaaaacaaaagccaagga
aacagatttgttttaggcccagtgatagaactcttctcaaaggaaaggatttcggaatta
acaccagcagaaaaagttaccaataggtatttgggaaacaggaaggacgtggtgttcttg
ggctgtgctgttttgcctccaacagtttttagtgaagatagtccaagtcctaagagacag
cgcctctctcattcagtctttgattatacatcagcatcaccagctccctcaccaccaatg
cgaccatgggagatgacatcaaataggcagcccccttcagttcgaccaagccaacatcac
ttctcaggggaacgatgcaacacacctgcacgcaacagaagaagtcctcctgtcaggcgc
cagagaggaagaagggatcgtctgtctcgacataattccattagtcaagatgaaaactat
caccatctcccttacgcacagcagcaagcaatagaggagcctcgagccttccaccctccg
aatgtatctccccgtctgctacatcctgctgctcatccaccccagcagaatgcagtcatg
gttgacatacatgatcagctccatcaaggaacagtccctgtttcttacacagtaacaaca
gtggcaccacatgggattccactctgcacaggccagcacatccctgcttgtagtacacag
caggtcccaggatgctctgtggttttcagtggacagcacctccctgtctgtagtgtgcct
cctccaatgcttcaggcatgttcagttcagcacttaccagtaccatatgctgcattccca
ccccttatttctagtgatccatttcttatacatcctcctcacctttctccccatcatcct
cctcatttgccaccaccaggccagtttgtccctttccaaacacagcaatcacgatcgcct
ctgcaaaggatagaaaatgaagtggaactcttaggagaacatcttccagtaggaggtttt
acttaccctccatcagcccaccccccaacattacctccatcagctcccttgcagttctta
acacatgatcctttgcatcaggaggtgtcctttggagtaccttatcctccatttatgcct
cggaggcttacaggacgtagtagataccgatcccagcagccaataccacctcccccttat
catcccagcttactgccatatgtgttatcaatgcttccagtgccacctgcagtgggccca
actttcagctttgaattagatgtagaagatggagaagtagaaaattacgaggccctgtta
aacctggcagagcgactgggagaggcaaagcctcgtggactgactaaagcagatattgaa
caacttccttcttatcggttcaatcctaacaaccaccagtcagaacagactttgcaaatc
gtacttgcccaatttgccgagctgatgcttcagaagtgcatcgggattcagaatgaccaa
cctaagaagcacaaatttagtttgggtgttcctcatcacatgtatatacggactatccat
tga

>gi568815589r:36239755_36476129|GENSCAN_predicted_peptide_7|215_aa
MGAAAWKWGLDVGEGVLVRAEKVRNHSDTVWMGAKHYGLGLMVCGPEVDQGDLVKMPISG
KASGDGEESFEYQEKVYEFVLGCIQSLPGLHAAHGSRVGQAYLEYRIYLLRILDYFEGSV
GASFQCQSIHHDHICHDDSDKLTRGSESVHVTTSLPAQPAFEKTSALNKTTKDPHRVHFI
PLLPPSEQMPQLRDRDTDHITGLFADTPQYQPGPQ

>gi568815589r:36239755_36476129|GENSCAN_predicted_CDS_7|648_bp
atgggggctgctgcatggaagtgggggctagatgttggtgaaggtgtccttgttcgagca
gagaaggtaagaaaccactcagacactgtgtggatgggtgcgaagcattatggattgggg
cttatggtttgtggccctgaggtagaccagggggatcttgttaaaatgccgatttctggc
aaggcatcaggtgatggtgaagaaagttttgagtaccaggagaaagtttatgaatttgtg
ttgggctgcattcaaagccttcctgggctgcatgcagcccatgggtcacgggttggacaa
gcttatttagagtatcggatctaccttttgagaatcttggactactttgaaggtagtgtt
ggtgcttcttttcagtgccagtccatccatcacgaccacatttgtcatgatgacagtgac
aagctaaccagaggttctgagtctgtccatgttacaacttcactgccagcacaaccagca
tttgagaaaaccagtgcactaaacaaaactaccaaggaccctcacagggtccacttcatt
cccctgctacctccatcggagcagatgccacagctgagagaccgggatactgatcacatt
acaggactctttgcagacactccccagtaccagcccggaccccagtag