GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:58:40

Sequence gi568815596r:189957261_190162596 : 205336 bp : 37.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    154    149    6                               1.05
 1.02 Term -   7419   7148  272  1  2   47   48   223 0.805   8.86
 1.01 Init -   7461   7443   19  0  1   50   63    12 0.321  -4.87
 1.00 Prom -  14211  14172   40                              -3.45

 2.02 PlyA -  14492  14487    6                               1.05
 2.01 Sngl -  15983  14727 1257  2  0   34   32   354 0.938  20.00
 2.00 Prom -  33785  33746   40                              -5.25

 3.02 PlyA -  34720  34715    6                               1.05
 3.01 Sngl -  41038  40712  327  1  0   87   48   160 0.612   7.66
 3.00 Prom -  48690  48651   40                              -5.85

 4.02 PlyA -  50998  50993    6                               1.05
 4.01 Sngl -  58497  57757  741  0  0   -1   48   451 0.960  28.15
 4.00 Prom -  60502  60463   40                              -6.25

 5.04 PlyA -  60764  60759    6                               1.05
 5.03 Term -  61775  61539  237  2  0   68   49   165 0.822   5.78
 5.02 Intr -  64376  64267  110  0  2   28  115    40 0.136  -0.22
 5.01 Init -  75887  75872   16  2  1   83  101     5 0.285   1.87
 5.00 Prom -  76345  76306   40                              -5.75

 6.02 PlyA -  76720  76715    6                               1.05
 6.01 Sngl -  81884  81600  285  2  0   85   46   577 0.983  46.49
 6.00 Prom -  83392  83353   40                              -1.35

 7.05 PlyA -  84007  84002    6                               1.05
 7.04 Term -  87381  87227  155  1  2   65   43   168 0.920   7.10
 7.03 Intr -  87616  87507  110  0  2   65   84    72 0.916   3.51
 7.02 Intr -  88515  88409  107  0  2   31   62    92 0.933  -1.01
 7.01 Init -  89424  89299  126  0  0   69  101    92 0.648   8.81
 7.00 Prom -  95658  95619   40                              -6.05

 8.04 PlyA -  95710  95705    6                               1.05
 8.03 Term - 100378  99998  381  1  0  101   50   211 0.963  12.45
 8.02 Intr - 103175 102802  374  0  2   93  119   192 0.966  16.66
 8.01 Init - 105336 104964  373  0  1   52   84   399 0.940  33.07
 8.00 Prom - 105502 105463   40                              -2.25

 9.00 Prom + 113885 113924   40                              -6.25
 9.01 Init + 123044 123113   70  1  1   84  103    20 0.683   4.36
 9.02 Term + 128543 128715  173  0  2   71   32   125 0.654   2.21
 9.03 PlyA + 130537 130542    6                               1.05

10.03 PlyA - 131507 131502    6                               1.05
10.02 Term - 135673 135657   17  2  2   90   42    31 0.335  -3.88
10.01 Init - 136717 136657   61  1  1   78  105    42 0.523   6.36
10.00 Prom - 137572 137533   40                              -1.05

11.00 Prom + 144439 144478   40                              -4.85
11.01 Sngl + 160862 161905 1044  1  0   57   37   282 0.941  16.88
11.02 PlyA + 164349 164354    6                               1.05

12.00 Prom + 179928 179967   40                              -7.25
12.01 Init + 182780 182821   42  1  0   94   52    44 0.397   1.87
12.02 Intr + 182867 182897   31  1  1   84  105    24 0.824   0.49
12.03 Term + 182944 183221  278  2  2   87   48   163 0.920   6.84
12.04 PlyA + 185593 185598    6                               1.05

13.02 PlyA - 186472 186467    6                               1.05
13.01 Term - 190926 190621  306  0  0    1   31   246 0.571   4.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_1|96_aa
MFETNIGSHIHNIKVQGEAASADVEATSYPEDLAKIIDEGGYTKQQIFNINKKYFYWKKM
PSRTFKAIEAKSVLGNKAFKDRLTLFLRANAAGDLS

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_1|291_bp
atgtttgagactaacataggaagccatatccataacataaaagtacaaggtgaagcagct
agtgctgatgtagaagctacaagttatccagaagatctagctaagatcattgatgaaggt
ggctacactaaacaacagattttcaatatcaacaaaaaatacttctattggaagaagatg
ccatctaggacttttaaagctatagaagcgaagtcagtgcttggaaacaaggctttcaag
gataggctgactctctttttaagggctaatgcagctggtgatttaagttga

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_2|418_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLK
TSTRQGCPLSPLLFNIVLEVLARAIRQEKEIKDIQLGKEEVKLSLFADDMIVYLEKPIIS
APNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQITSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRISIMKMAILPKVIYRFNAIPIKLPM
TFFAELEKTTSKFIWNQKRARIAKTILSQKNRAGCIMLPDFKLYYKTTAIKTAWYWYQNR
DIDQWNRTEPSEIIPHIYNHLIFDKPDKNKKRGKDSLFNKWCWENWLAICRKLKLDPFFT
PYTKINSRWIKDLNVRHKTIKTLEENLGNTIQDIGMGKDFMSKHQKQWQQKPKLTNGI

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_2|1257_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagccctttatgcta
aaaactctcaataaattaggtattgatgggatgtatctcaaaataataagagctatttat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actagcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaatcaggcaagagaaagaaataaaggatattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaagcccatcatctca
gccccaaatctccttaagctgataagcaactttagcaaggtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcacg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagag
gacacaaacaaatggaagaatattccatgctcatggataggaagaatcagtatcatgaaa
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttctttgcagaattggaaaaaactacttcaaagttcatatggaaccaaaaaagagcc
cgcattgccaagacaatcctaagccaaaagaacagagctggatgcatcatgctacctgac
ttcaaactatactacaagactacagcaatcaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaaccgaacagaaccctcagaaataataccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagaaaaggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttctttaca
ccttatacaaaaattaattcaagatggattaaagacttaaatgttagacataaaaccata
aaaaccctagaagaaaacctaggcaatactattcaggacataggaatgggcaaggacttc
atgtcaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaa

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_3|108_aa
MQLPFGWTEQHVETDTMDFCSKNYHRNIPGKLREFTDSLKEVHTTGNSVRQTKNCDFPKY
ERGKSYLQKHILTGELEKSRLWEDLSFPRAETDLAQNIKVKAAVGRGL

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_3|327_bp
atgcagctcccatttggatggacagaacagcatgtggagactgacaccatggacttttgc
tccaagaactaccacaggaacataccaggaaaactgagagaattcacagattctttgaaa
gaagtgcacaccactggaaattctgtaagacagacaaaaaactgtgactttccaaagtat
gaaagggggaaatcttacctccaaaaacacatactcactggggaactggaaaaatccaga
ttatgggaggacttaagctttcctagagctgaaacagatttagcacaaaatataaaagta
aaagcagcagtgggaagaggcttgtag

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_4|246_aa
MHSQRDGLKLELIHKREAECKSLKNLQPDHAVEKKNPFSGKEFKLAAEICMSNEEPSVNS
QDDGENVSRESQRLSQQPLLSQAQRPTGKQCFHGLSPGLCCCSVQPRDLAPCIPTMAKRG
QCTAEAVVSEGISPKPWWLTCGVGPMSAQKPRIEVWEPPYRFQRMYGNAWMSRQKFAAGV
ETSRRTSAKAVQKGNVGLEPPQRVLTGALPSGAVRRGPPSSRPQDDRSTDSLHVHVEKLQ
TLNASL

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_4|741_bp
atgcattcacaaagagatggtttgaaactggaacttatacataaaagggaagcagagtgt
aaaagtttgaaaaatttgcagcctgaccatgcagtagaaaagaaaaacccattttccgga
aaagaattcaagctggctgcagaaatttgcatgagtaatgaggagccaagtgttaatagc
caagatgatggagaaaatgtctccagggaatctcagaggctttcacagcagcctctccta
tcacaggcccagaggcctacagggaaacaatgttttcatgggctgagcccagggctttgc
tgctgctctgtgcagcctcgggacttggcaccctgcatcccaaccatggctaaaaggggc
caatgtacagctgaggctgttgtttcagagggtataagccccaaaccttggtggcttaca
tgtggtgttgggcccatgagtgcacagaagccaagaattgaggtttgggaacctccatat
agatttcaaaggatgtatggaaatgcctggatgtccaggcagaagtttgctgcaggggtg
gaaacttcacggagaacctctgctaaggcagtgcagaagggaaatgtgggtttggagccc
ccacagagagtcctcactggggccctgcctagtggagctgtaagaagagggccaccatcc
tccagaccccaggatgacagatcaaccgacagcttgcatgtgcatgtggaaaagctacag
acactcaatgccagcctgtga

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_5|120_aa
MAGDKFIGSGFPRKAWAQLKSLDSEGTYSWRLSANCTPCNQMNANSGTTWPENTPYDPSQ
SETIVVSSHQLCPIAESSRQPHLNSEQRQWPSHLENPKASSACPGFLSAGPSRITGYMKQ

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_5|363_bp
atggctggggataaattcattggctctggcttcccaagaaaagcatgggctcagctcaaa
agcttagattctgaaggcacttacagctggaggctatcagctaactgcactccttgcaat
caaatgaatgcaaacagcggtaccacctggccagaaaatacaccctatgacccatcccaa
tcagagacaattgtggtgtccagccatcagctctgcccgattgcagaatccagccggcag
ccccacctaaactcagagcaaagacagtggcccagccatctagagaacccaaaagcaagc
tctgcctgcccagggttcttatcagctggcccatccagaatcacaggctacatgaaacag
tga

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_6|94_aa
MEITPLHSSLGDRARLCLKKQTKKEEEEEEEEEEEEEEEEEEEEEEEEEKKERKKKKKEE
EEEEEEEEEEEEEEEEEEEEERKKERKKEGGLYK

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_6|285_bp
atggagatcacaccactgcactccagcctgggggacagagcaagactctgtctcaaaaaa
caaacaaaaaaagaagaggaagaagaggaagaagaggaagaagaggaagaagaggaagaa
gaggaagaggaagaggaagaagaagagaagaaagaaaggaagaagaagaagaaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaaagaaagaaagaaagaaagaaagagggaggactctacaaataa

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_7|165_aa
MVTDIMNNPLISSLYLEWKDAGASDALSIRLLEWKDVKFQLNERGSIEAAEQRQPAGPTS
MAPHKIRPTGLEIPPSHWCLWAGNRPVPPWDKAPRKRDKAAIFAVSQPSLVISPGRSSRS
GPPVTPHQSYRASSSLATPWTEPLRATKSLFATASAVELPLTPLD

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_7|498_bp
atggtcacagatattatgaataatcctctcatttcaagtctatatttagaatggaaagat
gctggtgcctctgacgcactgagcatcagacttctagaatggaaagatgtcaaatttcag
ttaaatgaaagaggctcaattgaggctgctgagcagcgacagcctgcaggccccacttcc
atggcacctcacaagataagacccactggcttggaaattccacccagccactggtgcctt
tgggccggcaacagacctgtacctccctgggacaaagctcccagaaaaagggacaaagct
gccatctttgctgtttcacagccttccctggtaatatctccaggtaggtcctccaggtct
gggcctccagtcaccccccaccagagctatcgagccagtagcagcttggcaactccctgg
acagagcctctcagggcaactaaaagcctctttgctactgcctctgcagtagaactgccc
ttgacacccttggactaa

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_8|375_aa
MQKLQLCVYIYLFMLIVAGPVDLNENSEQKENVEKEGLCNACTWRQNTKSSRIEAIKIQI
LSKLRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIIT
MPTESDFLMQVDGKPKCCFFKFSSKIQYNKVVKAQLWIYLRPVETPTTVFVQILRLIKPM
KDGTRYTGIRSLKLDMNPGTGIWQSIDVKTVLQNWLKQPESNLGIEIKALDENGHDLAVT
FPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIA
PKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPINMLYFNGKEQII
YGKIPAMVVDRCGCS

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_8|1128_bp
atgcaaaaactgcaactctgtgtttatatttacctgtttatgctgattgttgctggtcca
gtggatctaaatgagaacagtgagcaaaaagaaaatgtggaaaaagaggggctgtgtaat
gcatgtacttggagacaaaacactaaatcttcaagaatagaagccattaagatacaaatc
ctcagtaaacttcgtctggaaacagctcctaacatcagcaaagatgttataagacaactt
ttacccaaagctcctccactccgggaactgattgatcagtatgatgtccagagggatgac
agcagcgatggctctttggaagatgacgattatcacgctacaacggaaacaatcattacc
atgcctacagagtctgattttctaatgcaagtggatggaaaacccaaatgttgcttcttt
aaatttagctctaaaatacaatacaataaagtagtaaaggcccaactatggatatatttg
agacccgtcgagactcctacaacagtgtttgtgcaaatcctgagactcatcaaacctatg
aaagacggtacaaggtatactggaatccgatctctgaaacttgacatgaacccaggcact
ggtatttggcagagcattgatgtgaagacagtgttgcaaaattggctcaaacaacctgaa
tccaacttaggcattgaaataaaagctttagatgagaatggtcatgatcttgctgtaacc
ttcccaggaccaggagaagatgggctgaatccgtttttagaggtcaaggtaacagacaca
ccaaaaagatccagaagggattttggtcttgactgtgatgagcactcaacagaatcacga
tgctgtcgttaccctctaactgtggattttgaagcttttggatgggattggattatcgct
cctaaaagatataaggccaattactgctctggagagtgtgaatttgtatttttacaaaaa
tatcctcatactcatctggtacaccaagcaaaccccagaggttcagcaggcccttgctgt
actcccacaaagatgtctccaattaatatgctatattttaatggcaaagaacaaataata
tatgggaaaattccagcgatggtagtagaccgctgtgggtgctcatga

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_9|80_aa
MPLMTSYSSGGDRLVNRYVNIEGGASQQQGLRDEVTGAIKYYSGNYEHEGHGKGSACTRN
YLKDCLVSCTSGAEIAKKQT

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_9|243_bp
atgcccctgatgacctcatattccagtgggggagacagacttgtaaacagatatgttaac
atagaaggtggtgcctctcagcagcaaggcttaagagatgaagtaactggtgcaataaaa
tattatagtggaaattatgagcacgaaggccatgggaaaggttctgcttgcactagaaac
tacctaaaagactgtcttgtttcttgtaccagtggggctgaaatagccaaaaaacaaacc
taa

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_10|25_aa
MCLVTRQMRTEGRPFLAQVGAIDSL

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_10|78_bp
atgtgcttggtcacaagacagatgaggacagagggtaggcccttcttggcccaagttgga
gcaatcgactcgctgtaa

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_11|347_aa
MDKFLDTYTLPRLNQEKVESLTRPITGSEIEAIINSLPTKKSPRPDRFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFNEASIILIAKPGRDTTKKENFRPISLMNIDAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHMIISIDAEKACDKI
QQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPFSPFLF
NILLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDRIVYLENSIVSARNLLKLIGNFSKV
SGYKINVQKSQAFLYSNNRQTESQIMSELPFTIASKRTPGFLVFMPV

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_11|1044_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaaaaagttgaatct
cttactagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccaagaccagacagattcacagccgaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
tttaatgaggccagcatcatcctgatagcaaagcctggcagagacacaacaaaaaaagag
aattttagaccaatatccctgatgaacatcgatgcgaaaatcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatatgcaaatcaataaacgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctgtgacaaaatt
caacagcccttcatgctaaaaactctcaataaattaggtattgatgggacttatctcaaa
ataatcagagctatttatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaacaggcacaagacagggatgccctttctcaccattcctattc
aacatactgttggaagttctggccagggcaatcaggcaggagaaagaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacaggattgtatatcta
gaaaactccattgtctcagcccgaaatctccttaagctgataggcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcacaagcattcttatacagcaataacagacaa
acagagagccaaatcatgagtgaactcccattcacgattgcttcaaagagaacaccaggg
ttcttggtcttcatgccagtttag

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_12|116_aa
MKGLQTPCKSEIRWVSHPGHTDIRGYTPLLAAFMGCCWVSVAFPDTRCKLSVDLPFWGLE
DSGPLLTAPLGSAPVGSQCGGSHTTFPFCTALGEVLHKGSIPAAHYCLDIQASSEI

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_12|351_bp
atgaaggggctacagaccccatgcaagtctgaaatccgatgggtctcacatccaggtcac
actgatataagaggttatactcccctcctggctgctttcatgggctgctgttgggtgtct
gtggcttttccagatacacggtgcaagctctctgtggatctaccattctggggtctagag
gacagtggtcctcttctcacagctccactaggcagtgccccagtgggatctcagtgtggg
ggctcccacaccacatttcccttctgcactgccctaggagaggttctccacaagggctcc
attcctgcagcacactactgcttggacatccaggcatcttctgaaatctag

>gi568815596r:189957261_190162596|GENSCAN_predicted_peptide_13|101_aa
QTRDILSVIKAIYDKATANIILNGEKLKALPLRTGRRQGCPPSPLVFNTVLEVLARAIRQ
EKEIKGIHVGKEEVKLSLFADDMIVYLENPKDSSRKLLEQK

>gi568815596r:189957261_190162596|GENSCAN_predicted_CDS_13|306_bp
caaacaagggacatcctcagtgtaataaaagccatctatgacaaagccacagccaacata
atactgaatggggaaaagttgaaagcattacctctgagaactggaagaagacaaggatgc
ccaccctcaccactcgtcttcaacacagtactggaagtcctagccagagcaatcagacaa
gagaaagaaataaagggcatccacgttggtaaagaggaagtcaaactgtcactgtttgct
gatgatatgatcgtttaccttgaaaaccctaaggactcctccagaaagctcctagaacaa
aaataa