GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:57:31

Sequence gi568815590f:11443225_11664105 : 220881 bp : 48.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    230    445  216  1  0   53   35   129 0.458   2.80
 1.02 Intr +   1050   1247  198  2  0   78   60    71 0.760   2.85
 1.03 Intr +   2116   2251  136  0  1  109  -20    99 0.254   1.34
 1.04 Intr +   6561   6630   70  1  1   64   75    92 0.358   3.74
 1.05 Intr +  14695  14880  186  1  0   58   86   102 0.394   5.80
 1.06 Intr +  20409  20548  140  0  2   79   61    91 0.896   5.61
 1.07 Intr +  23094  23240  147  1  0   41   58    85 0.528   1.01
 1.08 Intr +  47186  47236   51  0  0   77   81    42 0.002   1.28
 1.09 Intr +  59712  59879  168  1  0   37   88    98 0.060   4.62
 1.10 Intr +  61625  61685   61  0  1   47   47    94 0.084  -1.01
 1.11 Intr +  65926  66129  204  1  0  103   41    71 0.096   2.22
 1.12 Intr + 100000 100123  124  1  1  106  105   136 0.114  17.69
 1.13 Intr + 102828 102879   52  2  1   76  116    92 0.999   9.28
 1.14 Intr + 104808 104901   94  1  1   87   60   179 0.999  14.02
 1.15 Intr + 105800 105898   99  2  0   95  100    98 0.997  10.93
 1.16 Intr + 106935 107038  104  0  2  113  102    12 0.967   4.92
 1.17 Intr + 111519 111649  131  1  2   82   21   193 0.359  12.41
 1.18 Intr + 112167 112260   94  2  1  102   92    35 0.357   4.84
 1.19 Intr + 113434 113613  180  2  0   57   26   364 0.834  26.94
 1.20 Intr + 114738 114814   77  1  2   65   77    58 0.576   1.63
 1.21 Intr + 117806 117856   51  1  0  115   68     7 0.572   0.50
 1.22 Intr + 118078 118228  151  0  1   94   98   271 0.984  28.44
 1.23 Intr + 119755 119886  132  2  0   86   96   173 0.982  18.52
 1.24 Term + 120679 120884  206  2  2  120   42   632 0.994  59.33
 1.25 PlyA + 121355 121360    6                               1.05

 2.11 PlyA - 121767 121762    6                              -0.45
 2.10 Term - 122508 122401  108  0  0   86   39    38 0.172  -2.79
 2.09 Intr - 123903 123816   88  2  1   97   80    31 0.556   3.17
 2.08 Intr - 124126 123977  150  0  0   65   90    89 0.441   6.08
 2.07 Intr - 124688 124565  124  0  1   45   66    50 0.204  -1.86
 2.06 Intr - 137456 137289  168  0  0   81   96    34 0.204   3.42
 2.05 Intr - 139994 139929   66  0  0  123   68    40 0.416   4.38
 2.04 Intr - 145471 145373   99  2  0   99   33    58 0.412   1.48
 2.03 Intr - 148489 148411   79  1  1   97   94    27 0.656   3.32
 2.02 Intr - 150413 150250  164  0  2   24   45   154 0.465   4.39
 2.01 Init - 152897 152795  103  2  1   99   49    87 0.758   6.30
 2.00 Prom - 154668 154629   40                              -5.56

 3.00 Prom + 167639 167678   40                              -0.36
 3.01 Init + 170629 170635    7  0  1   85   63    10 0.594  -1.33
 3.02 Intr + 174031 174225  195  2  0   88   44   119 0.829   6.89
 3.03 Term + 182801 182949  149  0  2   76   44   151 0.873   7.56
 3.04 PlyA + 184140 184145    6                               1.05

 4.00 Prom + 187162 187201   40                              -6.96
 4.01 Init + 189087 189165   79  2  1   61  105    52 0.608   5.49
 4.02 Intr + 189995 190103  109  0  1   83   89   -10 0.374  -2.06
 4.03 Intr + 195506 195644  139  2  1   92   54    82 0.256   5.67
 4.04 Intr + 207925 208037  113  0  2   81   90   101 0.429   8.78
 4.05 Intr + 214845 214878   34  0  1  111  113    -6 0.235   2.43
 4.06 Intr + 214918 215012   95  0  2   60  100    41 0.194   1.26
 4.07 Intr + 216411 216530  120  0  0   50   44   131 0.211   4.51
 4.08 Intr + 218072 218157   86  2  2   46   84    55 0.071   0.36
 4.09 Intr + 219699 219758   60  1  0   88   78    39 0.034   1.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100123  123  1  0   83  105   142 0.878  15.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:11443225_11664105|GENSCAN_predicted_peptide_1|1023_aa
AGPIPPTLGSSTTPHHSSTFHTEPAPHSSALHSHTPATVPHGATRPAPSTRRGRSRAEEW
SPEWQAAGVDSRVGGPAGLQPQFLGEGLQAPEVVIGWCGCSRPLFCTHFFHVDLGHRHST
VCPGSRTCEGTGGAGGGLVLSSSSRFYIQVLLYAPSFFLQEQHLTSPLQRQKQINLQLWR
EEGGPQRLLGGAFANHELTPLAAGGARHQLLEGQDTAAPFVSRAQGPVNSRCSVCADDAD
AVKSANKVQPESFTAPDDISPADLPQLHGDAQGTSPAREPLGIYCQLPPLDQDALEGTSG
HTEEMGAWSMPPVGEDGRPRTSTQNPSPDTASRELGDEVQPWLPGSSGRAANPRERMSGL
SRGGELCVAEETHSHVQVLTEAAASHCGVRKSPLAKRLLFSTTMGYKDVPLGSFSSLLSA
GLFAQIDTWDAEPGPEGGFYDKKHQNEDISVAMFQARGLHRTKSWQSSLSVAAVGAANLT
APEGMSSGPQLGFQHQLMPARSQPGLGLGSPGTLPSTIHRAVALDRMGLVSSKKPDKEKP
IKEKDKGQWSPLKVSAQDKDAPPLPPLVVFNHLTPPPPDEHLDEDKHFVVALYDYTAMND
RDLQMLKGEKLQVLKGTGDWWLARSLVTGREGYVPSNFVARVESLEMERWFFRSQGRKEA
ERQLLAPINKAGSFLIRESETNKGAFSLSVKDVTTQGELIKHYKIRCLDEGGYYISPRIT
FPSLQALNPWAQDEWEIPRQSLRLVRKLGSGQFGEVWMGYYKNNMKVAIKTLKEGTMSPE
AFLGEANVMKALQHERLVRLYAVVTKEPIYIVTEYMARGCLLDFLKTDEGSRLSLPRLID
MSAQTLGHSCVERERGGGGAQIAEGMAYIERMNSIHRDLRAANILVSEALCCKIADFGLA
RIIDSEYTAQEGAKFPIKWTAPEAIHFGVFTIKADVWSFGVLLMEVVTYGRVPYPGMSNP
EVIRNLERGYRMPRPDTCPPELYRGVIAECWRSRPEERPTFEFLQSVLEDFYTATERQYE
LQP

>gi568815590f:11443225_11664105|GENSCAN_predicted_CDS_1|3072_bp
gcaggacccatcccgccgactctgggcagctccacaactcctcaccactcgagcacattc
cacaccgagccagctcctcacagcagcgccctgcacagccacaccccagccactgtgccc
catggagccacccggccagcgcccagcacaagaagaggccgctcacgtgcagaagagtgg
tccccggagtggcaggcagctggggtggacagcagggtaggagggcctgcgggtctccag
cctcagtttctcggtgagggccttcaggctccggaggtggtcatcgggtggtgcggctgc
tcccgccccctcttctgcacccacttcttccacgtggatctggggcacagacattctaca
gtctgccctggcagccggacatgcgagggcacggggggcgcagggggaggcttggtcctg
tcctccagcagccgtttctacatccaggtcttactctacgctcctagcttcttcctccaa
gaacaacaccttacctcacctcttcagagacagaagcaaataaacctgcagctgtggagg
gaagaaggcggcccacagcggctccttggaggagccttcgccaaccatgagctaactcct
ctggctgctggaggagccagacatcagctccttgaggggcaggacactgctgcacctttt
gtgtcccgagcacagggccctgtaaacagcagatgttcagtgtgtgctgatgacgctgat
gcggtgaagtcagcgaacaaagtccagccagagtcgttcacagctccagatgacatctcc
ccagcagacctcccacagcttcatggggatgcccaagggacaagccctgcgagggagccc
ttgggcatctactgccagcttccacctttggatcaggatgccctggagggaacttccggc
cacactgaagaaatgggggcttggtccatgcccccagtgggagaagacggcagaccccga
acctccacccagaatccgagcccggacacggccagcagggagctaggagatgaagtccag
ccctggctgcccggctcctctgggagggcagcgaacccgcgggagcgcatgagcggcctc
tcccgggggggcgagctgtgtgtggccgaagaaacacattcacatgtacaagtcctcacg
gaagctgctgccagccactgtggggttcgcaagtccccactcgcaaaacggctactgttt
tccacaaccatgggatacaaggatgtccccttgggctccttctcatctctactctctgct
ggcctctttgcacagattgatacctgggatgctgagccaggaccagagggaggattttac
gacaagaaacaccaaaatgaggacatctctgtggccatgtttcaggcaagggggttacac
cgcacgaaaagttggcaatcctctctctcggtggctgctgtgggagcagctaacctcaca
gcacccgaagggatgtcatcgggaccccagctcggtttccagcatcagctgatgccagca
agaagccagccaggcctggggcttggcagcccagggactttaccatccaccatccacagg
gctgttgccctggacaggatggggctggtaagtagcaaaaagccggacaaggaaaagccg
atcaaagagaaggacaagggccaatggagccccctgaaggtcagcgcccaagacaaggac
gccccgccactgccgcccctggttgtcttcaaccaccttactcctccaccgcccgatgaa
cacctggatgaagacaagcatttcgtggtggctctgtatgactacaccgctatgaatgat
cgggacctgcagatgctgaagggggagaagctacaggtcctgaagggaactggagactgg
tggctggccaggtcactcgtcacaggaagagaaggctatgtgcccagtaactttgtggcc
cgagtggagagcctggaaatggaaaggtggttctttagatcacagggtcggaaggaggct
gagaggcagcttcttgctccaatcaacaaggccggctcctttcttatcagagagagtgaa
accaacaaaggtgccttctccctgtctgtgaaggatgtcaccacccagggggagctgatc
aagcactataagatccgctgcctggatgaagggggctactacatctccccccggatcacc
ttcccctcgctccaggccctgaatccctgggcccaggatgaatgggagatcccccggcag
tctctcaggctggtcaggaaactcgggtctggacaattcggcgaagtctggatgggttac
tacaaaaacaacatgaaggtggccattaagacgctgaaggagggaaccatgtctccagaa
gcctttctgggtgaggccaacgtgatgaaggctctgcagcacgagcggctggtccgactc
tacgcagtggtcaccaaggagcccatctacattgtcaccgagtacatggccagaggatgc
ctgctggatttcctgaagacagatgaagggagcagattgtcactcccaaggctgattgac
atgtcggcgcagacccttggacacagctgtgtggagcgagaacgaggagggggaggggca
cagattgctgaagggatggcatacattgagcgcatgaattccatccaccgcgacctgcgg
gcggccaacatcctggtgtctgaggccttgtgctgcaaaattgctgattttggcttggct
cgaatcatcgacagtgaatacacggcccaagagggggccaagttccccatcaagtggaca
gccccggaagccatccacttcggggtcttcaccatcaaagcagacgtgtggtcgtttgga
gtcctcctgatggaagttgtcacttatgggcgggtgccatacccagggatgagcaacccc
gaggtcatccgcaacctggagcgcggctaccgcatgccgcgccccgacacctgcccgccc
gagctgtaccgcggcgtcatcgccgagtgctggcgcagccggcccgaggagcggcccacc
ttcgagttcctgcagtcggtgctggaggacttctacacggccaccgagcggcagtacgag
ctgcagccctag

>gi568815590f:11443225_11664105|GENSCAN_predicted_peptide_2|382_aa
MEKASSMYEWLLTPPPPPPPSSSSSSPPSQVVFSGRKDSSFPVLPTEDTAALRGCDVLRD
TTLQLRHRPRSPNLRGLTNKEVRSAEETQAGVLLPLLISKGPPALCLASQPLCRLDGSPI
WAAILKLWMCIKEPPSPTPAFYLQGQRIGTHSAGKAPEWPLMQPDPGASAECVCRGKEMA
ANIDPAVEILMSSSDQEEEIKTSSTHPDGLPPPSMGLEAGAWALVQASLQCRCQHCAHCT
DEETEAQRNEAKSPRSNIRGEEVPDFERHVYVPNKNTPGYRFSSGHHSGKCDPSWRNSPS
SFKISSLTFPRKTKPEERLPLAYQSWKKPQASAGRGVSGPEHQPGPQCLPTVSGGCEGQE
LAERSLVAWSLSVSSSAETASW

>gi568815590f:11443225_11664105|GENSCAN_predicted_CDS_2|1149_bp
atggagaaggcttccagcatgtatgagtggttgctaacaccaccaccaccaccaccacca
tcatcatcatcatcatcaccaccatctcaagtggtcttcagtgggaggaaggacagctcc
ttccctgtgttaccgaccgaggacacagcagccctgcgaggctgtgatgtgctcagggac
accacattgcagctgcgacacaggccccggtctcctaatctgcgtgggctgaccaacaag
gaggtccgctccgcagaggagactcaggctggtgtccttctgcccctgctcatctccaag
ggcccccctgccctttgcttggcatctcagcccttgtgtcgcctggatggttccccaatc
tgggctgccatcttgaaactctggatgtgcatcaaagagcccccatctccaacaccggcc
ttctacctccaggggcagaggattggaacacactcagcagggaaagctcccgagtggccg
ctcatgcagcctgaccctggagcatctgcagaatgtgtgtgcagaggaaaagaaatggca
gcaaatatcgatcctgcagtggagattcttatgagcagttctgaccaagaagaggagatc
aaaacctcctccacacatccagatgggttgcctcctccttctatgggcctggaggcagga
gcatgggcattagtccaggcaagcctacaatgcaggtgtcagcattgtgcccattgcaca
gatgaggaaaccgaggctcagagaaatgaagcaaagtctccgaggtcaaacatccgggga
gaggaagtgcctgattttgaaagacatgtttatgtcccgaacaagaacacaccaggatac
aggttcagctccgggcaccattcgggcaagtgcgacccctcgtggagaaactctccctca
tccttcaagatctccagcctcacctttcccaggaaaaccaagccggaggagaggttgcca
cttgcataccagagctggaaaaagccacaggcatctgctggtcgtggagtttcaggacct
gaacatcagcctggcccccagtgcttgcccacggtcagtgggggctgtgagggccaagaa
ctggctgagaggagcctggtggcatggagtctgtccgtttcatcatctgcagaaacagct
tcgtggtag

>gi568815590f:11443225_11664105|GENSCAN_predicted_peptide_3|116_aa
MADWTFQLAAIRISPSHIYGAPTKSGLWWGRQELQKIQRRKSRVPPTQSSPSTKRIKQVP
EIPSPKHASCLQNGAAVGRQESMPGKHVACGPQQMMMTLIITDNDAIDDNDDMDNH

>gi568815590f:11443225_11664105|GENSCAN_predicted_CDS_3|351_bp
atggcggactggaccttccagctggctgccattcgcattagcccctcacatatctatgga
gctcctactaagagcggtctctggtggggccgtcaggagctgcagaagattcagagaagg
aaaagtcgtgtcccacccacccagagctctccatctaccaaaaggataaagcaggtcccc
gaaatccccagcccaaagcatgcttcctgcctgcagaatggcgctgctgtggggaggcaa
gagagcatgcctggaaagcacgtggcatgtgggccacagcaaatgatgatgacattgatc
attactgacaatgatgccatcgatgataatgatgacatggataatcattga

>gi568815590f:11443225_11664105|GENSCAN_predicted_peptide_4|279_aa
MAPNLNLQLLVGCGHLNPNSAFGIFKAKPGLCASGSPATGGKAWTCLSLLLSELGVGKTA
EMCSNHIQGLNFSQNYVNLYNQIGFPKILVLAKPSWDKEASYAYFLICNSPSQTHRSRYA
RDVPVVTTGSSWDTGASGQYLPSNSSRRCLPGSSGKRKRPGSLIRSCLVMCDKVEGMPGF
QAAPTREEKRSTFLISPEAPAGTIGRLPLLLPSGKHGGLSPQGTFGEVTGDSNALVSIKS
FSDLHKSTQIPDSPDKEKSHKAPRFIGLMDSTSTIVVRX

>gi568815590f:11443225_11664105|GENSCAN_predicted_CDS_4|837_bp
atggctccaaatctcaacctccaactgcttgtcggatgtggccacctgaatcccaacagc
gcctttggtatctttaaagcaaagcctgggctgtgtgcgtcaggctctccagccactggg
ggcaaggcctggacctgcctatctctcctgctctctgaactcggtgttgggaagacagcg
gagatgtgctcaaatcacatccaggggctcaacttctcacaaaactatgtgaatttatac
aatcaaattggattccccaagatacttgtgctggctaaaccttcatgggacaaagaagcc
tcatatgcttatttcctcatctgtaatagccccagccagacacatcgatcccgctacgcc
agggatgtacccgtggtgaccacaggtagctcctgggacaccggagcctctggccaatat
ttacccagtaattcaagcagaagatgcctgcctgggtcttctgggaagagaaagaggcca
ggcagcctgattcggagctgccttgtcatgtgtgataaagtggaaggaatgccaggtttc
caggcagccccaaccagggaggagaaaagaagcaccttcctcatctccccagaagcacca
gctggcaccataggccgcctgcccctgctgctgcccagtggaaagcacggtggactttct
ccccagggcacctttggggaagtgacaggagactccaatgcactggtatccatcaaatcc
ttctctgatttacacaaatctacacaaatacctgattcccccgataaggaaaagtcccac
aaggcccccaggtttattggcctcatggactcaactagtaccattgtagtcagagnn