GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:41:07

Sequence gi568815581r:66112136_66329379 : 217244 bp : 41.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1151   1146    6                               1.05
 1.03 Term -   3898   3809   90  1  0   58   55    97 0.081   0.14
 1.02 Intr -  17688  17611   78  0  0  123   50   110 0.894   9.53
 1.01 Init -  23054  23004   51  2  0   54   92    21 0.277   0.31
 1.00 Prom -  23318  23279   40                              -7.25

 2.00 Prom +  23536  23575   40                              -5.85
 2.01 Init +  24853  24909   57  0  0   76   94    31 0.031   3.86
 2.02 Intr +  42892  42960   69  0  0  118   74    47 0.038   4.76
 2.03 Term +  44580  45302  723  2  0  -12   42   406 0.791  18.49
 2.04 PlyA +  45530  45535    6                               1.05

 3.00 Prom +  45708  45747   40                              -4.95
 3.01 Sngl +  46970  47542  573  1  0   70   37   171 0.775   6.14
 3.02 PlyA +  47737  47742    6                               1.05

 4.00 Prom +  48352  48391   40                              -3.75
 4.01 Init +  52909  53084  176  0  2   38   44   114 0.157   0.87
 4.02 Term +  57739  57916  178  1  1   92   34   116 0.383   2.78
 4.03 PlyA +  58882  58887    6                               1.05

 5.00 Prom +  62812  62851   40                              -3.45
 5.01 Init +  80054  80136   83  1  2   95   43   110 0.016   5.69
 5.02 Intr +  85460  86050  591  2  0   -8   63   624 0.029  41.08
 5.03 Intr +  86188  86544  357  1  0  -11   32   339 0.259  11.85
 5.04 Term +  91874  92075  202  2  1   32   55   156 0.326   2.58
 5.05 PlyA +  93004  93009    6                               1.05

 6.00 Prom +  96002  96041   40                              -5.75
 6.01 Init +  96277  96417  141  0  0   66   41   180 0.899  11.28
 6.02 Intr +  97444  97523   80  0  2   86   63    23 0.804  -2.97
 6.03 Term +  98152  98356  205  1  1   55   38   143 0.809   1.86
 6.04 PlyA +  98528  98533    6                               1.05

 7.09 PlyA -  99447  99442    6                               1.05
 7.08 Term - 100053  99998   56  1  2   88   45    48 0.764  -2.76
 7.07 Intr - 102515 102318  198  0  0   82  110   128 0.928  12.80
 7.06 Intr - 104832 104653  180  1  0   22   86   138 0.950   5.92
 7.05 Intr - 108607 108419  189  2  0   30   98   195 0.679  13.34
 7.04 Intr - 111639 111563   77  2  2  105   99   112 0.773  12.24
 7.03 Intr - 113989 113893   97  2  1   58   86    69 0.994   1.85
 7.02 Intr - 116061 115885  177  1  0  101  113   142 0.996  16.97
 7.01 Init - 117244 117181   64  1  1   68   83    13 0.944  -0.12
 7.00 Prom - 119578 119539   40                              -6.45

 8.04 PlyA - 120877 120872    6                               1.05
 8.03 Term - 136532 136285  248  0  2   97   54   220 0.066  14.47
 8.02 Intr - 155876 155547  330  0  0   24   64   178 0.286   3.68
 8.01 Init - 157657 157537  121  1  1   68   74   103 0.784   7.30
 8.00 Prom - 165793 165754   40                              -6.05

 9.03 PlyA - 167602 167597    6                               1.05
 9.02 Term - 168890 168662  229  1  1   43   41   154 0.149   1.32
 9.01 Init - 190404 190145  260  0  2   52   21   416 0.288  25.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  71172  71059  114  1  0   67  110   119 0.887  11.50
S.002 Init -  73998  73989   10  0  1   86  111     0 0.857   2.85
S.003 Init -  81847  81800   48  1  0  102  110     7 0.823   5.30
S.004 Init - 146449 146327  123  1  0   56   91   118 0.941   9.12
S.005 Init + 190717 190889  173  0  2  107   82   209 0.994  21.16
S.006 Intr + 192365 192432   68  2  2  105   70    48 0.828   2.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_1|72_aa
MPLHYLGFIGARIRGNIEVYSKKSPVSLDDSDIEARLNSWNLGKCGNLAIVLSVAFILGL
IETCFNLHFGAY

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_1|219_bp
atgcctctccattacttgggcttcattggagcacgtattaggggtaacatagaagtttat
tcgaaaaaatctcctgtttctttggatgatagtgacattgaagctcgccttaatagttgg
aatcttgggaaatgtggaaacctggccattgtactcagtgtggccttcattttggggctg
attgagacctgctttaaccttcatttcggggcttattga

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_2|282_aa
MAQRKEQNKSPETNPKEMKDDTTRRSSSDASTLILDFSASRTHENFVKHTQVSIAKLIKR
KKGYQRLKINLMKLSVKTRLEKKNEKEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLEN
TLQDIIQANFPNLARQTNIQIQEIQRALQRHSSRRATPRHIIVRFTKVAMKEKMLRAARE
KGHVTHKGKPIRLTSDLLAETLQARREWGPIFNILKEKNFQSRISYPAKLSFISEGEIKS
FTDEQMLRDFVTTRPALQELLKETLNMETKNQYQPLQKHTKL

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_2|849_bp
atggcccaaagaaaggaacaaaataaatctccagaaaccaaccctaaagaaatgaaggat
gatacaacaagaaggtcctcatcagatgccagcaccttgattctggatttctcagcctcc
agaactcacgagaacttcgtgaagcatacgcaagtatcaatagccaaattgatcaagcgg
aagaaaggatatcagagattaaagatcaacttaatgaaattaagtgtgaagacaagatta
gagaaaaagaatgaaaaggaacaaagtctccaagaaatatgggactatgtgaaaagacca
aatttacgtctgattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaac
actcttcaggatattatccaggcaaacttccccaacctggcaagacaaaccaatattcaa
attcaggaaatacagagagcactacaaagacactcctcaagaagagcaaccccaagacac
ataattgtcagattcaccaaggttgcaatgaaggaaaaaatgttaagggcagccagagag
aaaggtcacgttacccacaaagggaagcccatcagactaacatcggatctcttggcagaa
accctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaatttt
caatccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatcc
tttacagacgagcaaatgttgagagattttgtcaccaccaggcctgccttacaagagctc
ctgaaggaaacactaaatatggaaacgaaaaaccagtaccagccactgcaaaaacatacc
aaattataa

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_3|190_aa
MDKFLDTYTLPRLNQEEVKTLNRPITSSEIEAVINSLPTKKSPGPDGFTAEFYHRCKEEL
LPFLLKLFQTIEKEGLLPNSFYEARVILIPKPGRDTTKKENFRPISLMNIDAKIVNKILA
NRIQQHIKKFIHHNQVGFITGMQGWFNICKSINVIHHINRTNDKNHMIISIDAEKAFNKN
STPLHAKNSQ

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_3|573_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaagaagtcaaaacc
ctgaatagaccaataacaagttctgaaattgaggcagtaattaatagcctaccaaccaaa
aaaagcccaggtccagatggattcacagccgaattctaccataggtgcaaagaggagctg
ttaccattccttctgaaactattccaaacaatagaaaaagagggactcctccctaactca
ttttacgaggccagagttatcctgataccaaaacctggcagagacacaaccaaaaaagaa
aatttcagaccaatatccctgatgaacatcgatgcaaaaatcgtcaataaaatactggca
aaccgaatccaacagcacatcaaaaagtttatccaccacaatcaagttggcttcatcact
gggatgcaaggctggttcaacatatgcaaatcaataaatgtaatccatcacataaataga
accaatgacaaaaaccacatgattatctcaatagatgcagaaaaggccttcaataaaaat
tcaacaccccttcatgctaaaaactctcaataa

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_4|117_aa
MQVSTEERSPMWQSQFLCTSTQALVPIPTPHPHRDREQATSSPSGQSGFAMAKQKIRIWS
EVQAQLNWVFCLGPQKAAIMIGPDLGSHLEAQLGKDSLPDLCGCQQHSVPYGYLIHV

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_4|354_bp
atgcaagtaagcacagaagaaaggtctcccatgtggcagagccagtttctatgcaccagc
acccaagccctagtccccattcctaccccacatccccaccgagacagagaacaggccacc
agctctccatctggtcagtcaggttttgcaatggccaagcagaagattcggatctggtca
gaagtccaggcacagctgaactgggtcttctgtttagggccacaaaaggctgcaatcatg
attggaccagacctgggttctcatctagaggctcaactagggaaggattcacttcccgac
ttgtgtggatgtcagcagcattccgttccttatggctatctgattcatgtatga

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_5|410_aa
MATFPAAATTGAPGWGRRLPRGHFSTHREEEPGPDGAPGKSLPLPVFAGSREPGLGEVCL
DARAGSTEGGGPSPVLLSVVDHFNRIGKVGIQKCVIGLFWGSWQKKVLDVLNSFAVPFDE
DDKDNSMWFLDHDYLENMYGMFKKVNARERIVGWYHTGLKIHKNGITINELMKRYYPNSV
LIIIDVNPKDLGLPTEAYISVEEIQDDGTPTLKTFEHVTSEIGAESYLEKVATGKLRINH
QIIYELQDVFNLLPDVSLQEPIKAFYLRTNDQMVVVYLASLIHSVGLTDPFCGRPAQPHQ
QQDCQPGWRQERRAGEKREQKDRKADKGKDKDKEKSDVKKEQKNHCLKEKYRFRQDSLPD
DPRVLGLELTPPVARQYSPQDLSEIPRHADFRCDPAHFQLWWSQGETPST

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_5|1233_bp
atggcgacgttcccggcggcggcgaccaccggcgccccaggctgggggcggagacttccg
cgcgggcatttctccacccacagggaagaagagcctgggcctgatggagccccagggaaa
tcactaccgctgccggtgtttgcaggtagcagggagccaggcctgggcgaggtgtgtctc
gatgccagagctggtagtacagaaggtggtgggccatccccggtgctgctcagcgtggtg
gatcatttcaaccgaatcggcaaggttggaatccagaaatgcgtcattggtctgttttgg
gggtcatggcaaaagaaagtacttgatgtattgaacagttttgcagttccttttgatgaa
gatgacaaagacaattctatgtggtttttagaccatgattatttggaaaacatgtatgga
atgtttaagaaagtcaatgccagagaaagaatagttggctggtaccacacaggcctgaaa
atacacaagaatggcattaccatcaatgaactcatgaaaagatactatcctaactcggta
ttgatcattattgacgtgaatccaaaggacctagggctgcccacagaagcatacatttca
gtggaagaaatccaagatgatggaactccaaccttgaaaacatttgaacatgtgaccagt
gaaattggagcagagagctacctggaaaaagtagccacaggcaagctgcgcatcaaccac
cagatcatctacgagctgcaggacgtcttcaacctgctgccagatgttagcctgcaggag
cctattaaagccttttacctgaggaccaatgaccagatggtggtagtgtacttggcctca
ctgatccattctgtgggcctcactgatccattctgtggtcgccctgcacaacctcatcaa
caacaagattgccaaccaggatggagacaagaaagaagggcaggagaaaaaagagagcaa
aaagatagaaaagctgacaaggggaaagataaagataaggaaaagagtgatgtaaagaaa
gagcagaaaaaccactgtcttaaagagaagtaccggttcaggcaggattcattaccggat
gatccaagagtcctcggacttgaattaacaccaccagttgccaggcagtactcaccacaa
gacttgagtgagatcccgcgccatgccgacttcaggtgtgacccagcacatttccagctg
tggtggtcacagggagagactccttctacttga

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_6|141_aa
MKVFVTPPEEPLRPTEEPAKDEENTKWMVVEEEDEYQLQFEGQLQHQSQCSDYVWAREDI
LNAYCPPSMSRAVRLSKGNLELLNESLEGRGATLVSVKGGGAEKHLGEKIWSTSHGIGLS
SEKEAWVGKSYGECRLWRSDG

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_6|426_bp
atgaaggtctttgtcacaccaccagaagagccactgagaccaacagaagagccagccaag
gatgaggagaatacgaaatggatggtggtggaggaagaagatgagtatcagttgcagttc
gaaggccaactgcagcatcagagccaatgcagtgactatgtgtgggcaagagaagacatt
ctaaatgcttactgccctccttccatgtctagagctgttaggttaagtaaagggaatttg
gagcttttgaatgaaagcctagaagggaggggagccactctggtttctgtaaaaggagga
ggagcagagaagcatcttggagaaaagatctggtccacatcacacggaatcgggttaagt
tctgagaaagaggcatgggtggggaaatcctatggagaatgcagattgtggagaagtgat
gggtag

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_7|345_aa
MISPVLILFSSFLCHVAIAGRTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGG
MRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTTFEYPNTISFSCNTGFYLNGAD
SAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAM
FGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSL
DGPEEIECTKLGNWSAMPSCKASCKVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFC
KNKEKKCSYTEDAQCIDGTIEVPKCFKEHSSLAFWKTDASDVKPC

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_7|1038_bp
atgatttctccagtgctcatcttgttctcgagttttctctgccatgttgctattgcagga
cggacctgtcccaagccagatgatttaccattttccacagtggtcccgttaaaaacattc
tatgagccaggagaagagattacgtattcctgcaagccgggctatgtgtcccgaggaggg
atgagaaagtttatctgccctctcacaggactgtggcccatcaacactctgaaatgtaca
cccagagtatgtccttttgctggaatcttagaaaatggagccgtacgctatacgactttt
gaatatcccaacacgatcagtttttcttgtaacactgggttttatctgaatggcgctgat
tctgccaagtgcactgaggaaggaaaatggagcccggagcttcctgtctgtgctcccatc
atctgccctccaccatccatacctacgtttgcaacacttcgtgtttataagccatcagct
ggaaacaattccctctatcgggacacagcagtttttgaatgtttgccacaacatgcgatg
tttggaaatgatacaattacctgcacgacacatggaaattggactaaattaccagaatgc
agggaagtaaaatgcccattcccatcaagaccagacaatggatttgtgaactatcctgca
aaaccaacactttattacaaggataaagccacatttggctgccatgatggatattctctg
gatggcccggaagaaatagaatgtaccaaactgggaaactggtctgccatgccaagttgt
aaagcatcttgtaaagtacctgtgaaaaaagccactgtggtgtaccaaggagagagagta
aagattcaggaaaaatttaagaatggaatgctacatggtgataaagtttctttcttctgc
aaaaataaggaaaagaagtgtagctatacagaggatgctcagtgtatagatggcactatc
gaagtccccaaatgcttcaaggaacacagttctctggctttttggaaaactgatgcatcc
gatgtaaagccatgctaa

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_8|232_aa
MTLKEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGVNEENLYGAIIVTPRAAKPD
IQRPCLGRDQSLSVASWNPRINLRDAGIMDEGLSSAPAPLFSHPSTNQARPCLASKIRQT
ENVQGDMAIDSWATFLRPQEPRDFLTKWRRIFSWRWRFAMLPRLYLYFPKRILLAEVNFQ
LASVAREMALSNDITSLIASLISQLIAISGALTVSGTGLRAGDAASKDRVSP

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_8|699_bp
atgactcttaaggagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcaccgggttggg
gtcaatgaagagaacctctatggggctatcattgtcacccccagagcagcaaagcctgac
atacagagaccatgtcttggcagggaccagagcttatccgtagcatcctggaacccaagg
atcaacttgagagatgctgggatcatggacgaaggccttagctcagcccctgccccactt
ttctcccatccaagtactaaccaggcccgaccctgcctagcttccaagatcagacagacg
gagaatgttcagggtgacatggccatagacagctgggccacttttctaaggccacaggag
cccagggactttctgaccaagtggaggaggattttttcgtggagatggaggtttgccatg
ttgcccaggctgtatctgtattttccaaagagaattttattagcggaagtgaacttccag
ttggcaagtgttgccagggaaatggctctgagcaacgacattacttccctcattgcttcc
cttatcagtcagttaatagctatttctggagcactgactgtgtcaggcactggtctacgt
gctggggatgcagccagtaaagacagagtcagcccttga

>gi568815581r:66112136_66329379|GENSCAN_predicted_peptide_9|162_aa
MPRARGREDERRGRAGRARAGVRRGCGGGGAERTGPSAEEAASALRCWEHWARGGGGGGG
GGGGGGGGGRGRAGPSGDAGEEAGSGGVTRGDASPMDQTGLTANLQAMVAASSVGSQDIG
VKTVPVRGPHLDPVLQAGGPLEKGLPSAPKGKENARCHHGCN

>gi568815581r:66112136_66329379|GENSCAN_predicted_CDS_9|489_bp
atgccccgagcgcgaggccgcgaggacgagcggcgggggcgcgcgggccgggcgcgcgcg
ggggtgcggcgagggtgcggcggcggcggcgctgagcggaccggaccgagtgcggaggag
gcagcgagtgccttgcggtgctgggaacactgggcaaggggaggcggcggcggcggcggc
ggcggcggcggcggcggcggcggcggccgggggagggccggcccgagtggggatgcgggg
gaggaggccgggagtggcggggtcacccggggggatgcttcgcccatggaccaaacaggc
ctaacagcaaacctgcaggcaatggttgctgcttcaagtgtgggaagccaggacattgga
gtgaagactgtcccagtcaggggaccccacctagaccctgtcctgcaagcaggagggcca
ttggaaaagggattaccttcagctccaaagggaaaggagaatgcccgatgccatcatggc
tgtaactag