GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:39:45

Sequence gi568815593f:173044546_173263918 : 219373 bp : 45.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -     12      7    6                               1.05
 1.05 Term -  11294  11190  105  2  0   43   42   160 0.812   5.31
 1.04 Intr -  12316  12150  167  2  2  127   23    59 0.680   2.98
 1.03 Intr -  34542  34448   95  2  2   52   86    77 0.319   3.51
 1.02 Intr -  41360  41224  137  2  2   24   91   132 0.350   6.47
 1.01 Init -  43665  43648   18  0  0   62   89    31 0.405   0.65
 1.00 Prom -  44002  43963   40                              -9.85

 2.00 Prom +  44214  44253   40                              -4.96
 2.01 Init +  45779  46856 1078  1  1   69   67   688 0.091  59.36
 2.02 Intr +  64079  64273  195  0  0   33   95   129 0.942   7.49
 2.03 Intr +  65977  66166  190  2  1   92   99    86 0.414   8.74
 2.04 Intr +  67761  67834   74  0  2   79   52    66 0.343   1.15
 2.05 Intr +  78535  78657  123  2  0   90  103    72 0.613   9.46
 2.06 Term +  89085  89200  116  1  2  100   37    15 0.184  -3.67
 2.07 PlyA +  89547  89552    6                              -0.45

 3.00 Prom +  93053  93092   40                              -3.36
 3.01 Init + 100001 100084   84  1  0  115   84   115 0.939  14.62
 3.02 Intr + 102321 102413   93  2  0   70   94    27 0.714   1.66
 3.03 Intr + 109777 109868   92  0  2   74   96    73 0.975   5.49
 3.04 Intr + 115388 115506  119  2  2   97   71   156 0.999  14.91
 3.05 Term + 119180 119376  197  0  2   94   50   290 0.982  23.37
 3.06 PlyA + 119791 119796    6                               1.05

 4.05 PlyA - 119808 119803    6                               1.05
 4.04 Term - 130922 130808  115  1  1   40   43    97 0.299  -1.56
 4.03 Intr - 133058 132951  108  1  0   66   99    45 0.494   2.80
 4.02 Intr - 139433 139279  155  2  2   83  102    67 0.172   6.47
 4.01 Init - 149152 149078   75  1  0   80   79    31 0.021   2.49
 4.00 Prom - 160636 160597   40                              -5.36

 5.03 PlyA - 161173 161168    6                              -0.45
 5.02 Term - 161391 161241  151  2  1   84   43   141 0.944   6.58
 5.01 Init - 164241 164171   71  0  2   49   78    63 0.707   1.92
 5.00 Prom - 164405 164366   40                              -2.16

 6.00 Prom + 168181 168220   40                              -7.76
 6.01 Sngl + 169154 169336  183  1  0   97   48   215 0.488  11.66
 6.02 PlyA + 169730 169735    6                               1.05

 7.09 PlyA - 174016 174011    6                               1.05
 7.08 Term - 181473 181291  183  0  0   62   36   226 0.987  12.34
 7.07 Intr - 184434 184042  393  0  0   32   65   135 0.278   0.45
 7.06 Intr - 185419 185217  203  2  2   98   60   116 0.941   8.80
 7.05 Intr - 187086 186919  168  1  0  -21   65   140 0.079   0.72
 7.04 Intr - 188664 188041  624  1  0  103   23  1145 0.124 101.72
 7.03 Intr - 190680 190205  476  2  2   80  100   362 0.041  29.31
 7.02 Intr - 208058 207965   94  0  1  140  100    20 0.518   7.42
 7.01 Intr - 213977 213841  137  1  2  107   95    43 0.354   7.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  62392  62440   49  0  1   77   58    66 0.879   1.61
S.002 Term - 188664 188024  641  1  2  103   50  1143 0.826 106.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_1|173_aa
MEEELQTPFLLVGTQTDLRDDPSTIEKLAKNKQKPITPETAKKLTHDLKAISLSLCDLMP
SSYNWYVVIIIALILSPDSYEKEGRLPAAAAPGSEAAGKGRAARQDGRPALPIPGLAYCP
PASPIYRRPALLCNRPGPGHGFRGTGINQTACTFEERDPYTTVQPECHYYRSA

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_1|522_bp
atggaagaagagctgcagactcctttcttgcttgttgggacccaaactgatctcagagat
gacccctctactattgagaaacttgccaagaacaaacagaagcctatcactccagagact
gctaaaaagctgacccatgacctgaaggccatcagtctctccttatgtgacctcatgccg
tcgtcctacaactggtatgtagtcataatcattgccctaattctctcccctgattcctat
gagaaagaaggccgactgccggcagcagcggccccgggctcggaggcagcggggaagggc
cgggcggcccggcaggacggacgcccggcgctgcccatccccggcctagcctactgcccg
cccgcgagtcccatctaccgccgccccgcgcttttatgtaaccgtcccgggccggggcac
ggattccgaggcacagggatcaatcagactgcgtgcacctttgaagagagagacccgtat
acgactgtacaaccagaatgccactactacagaagcgcctag

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_2|591_aa
MNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGALTSNWEQWDTYCEDLTKYTKLTSCD
IWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQSVSDSLYYPDSLFSVKQNPL
PSSFPGKKITSRAAAPVCSSKTLQAEVPLSDCVQKASKPTSSTQIMVKTNMYHNEKVNFH
VECKDYVKKAKVKINPVQQSRPLLSQIHTDAAKENTCYCGAVAKRQEKKGMEPLQGHATP
ALPFKETQELLLSPLPQEGPGSLAAGESSSLSASTSVSDSSQKKEEHNYSLFVSDNLGEQ
PTKCSPEEDEEDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPG
YENDSVEDLKEVTSISSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWNRDTLPSNMYQKN
GLHHGKYAVKKSRRTDVEDLTPNPKKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRK
EKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQNPRDERGPN
MGQKLEILIKDTLGLPVAGQTSEFVNQVLEKTAEGNPTGGLVGLRIPTSKV

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_2|1776_bp
atgaactaccaacagaatcctagagacaactttctttctttggaggactgcaaagacatt
gaaaatctggagtctttcacagatgtcctggataatgagggtgctttaacctcaaactgg
gaacagtgggatacatactgtgaagacctaacgaaatataccaaactaaccagctgtgac
atctggggaacaaaagaagtggattacttgggtcttgatgacttttctagtccttaccaa
gatgaagaggttataagtaaaactccaactttagctcaacttaatagtgaggactcacag
tctgtttctgattccctttattaccccgattcacttttcagtgtcaaacaaaatccctta
ccctcttcattccctggtaaaaagatcacaagcagagcagctgctcctgtgtgttcttct
aagactctgcaggctgaggtccctttgtcagactgtgtccaaaaagcaagtaaacccact
tcaagcacacaaatcatggtgaagaccaacatgtatcataatgaaaaggtgaactttcat
gttgaatgtaaagactatgtaaaaaaggcaaaggtaaagatcaacccagtgcaacagagc
cggcccttgttgagccagattcacacagatgcagcaaaggagaacacctgctactgtggt
gcagtggcaaagagacaagagaaaaaagggatggagcctcttcaaggtcatgccactccc
gctttgccttttaaagaaacccaggaactattactaagtcccctgccccaggaaggtcct
gggtcacttgcagcaggagagagcagcagtctttctgccagtacatcagtctcagattca
tcccagaaaaaagaagagcacaattattctctttttgtctccgacaacttgggtgaacag
ccaactaaatgcagtcctgaagaagatgaggaggacgaggaggatgttgatgatgaggac
catgatgaaggattcggcagtgagcatgaactgtctgaaaatgaggaggaggaagaagag
gaagaggattatgaagatgacaaggatgatgatattagtgatactttctctgaaccaggc
tatgaaaatgattctgtagaagacctgaaggaggtgacttcaatatcttcacggaagaga
ggtaaaagaagatacttctgggagtatagtgaacaacttacaccatcacagcaagagagg
atgctgagaccatctgagtggaaccgagatactttgccaagtaatatgtatcagaaaaat
ggcttacatcatggaaaatatgcagtaaagaagtcacggagaactgatgtagaagacctg
actccaaatcctaaaaaactcctccagataggcaatgaacttcggaaactgaataaggtg
attagtgacctgactccagtcagtgagcttcccttaacagcccgaccaaggtcaaggaag
gaaaaaaataagctggcttccagagcttgtcggttaaagaagaaagcccagtatgaagct
aataaagtgaaattatggggcctcaacacagaatatgataatttattgtttgtaatcaac
tccatcaagcaagagattgtaaaccgggtacagaatccaagagatgagagaggacccaac
atggggcagaagcttgaaatcctcattaaagatactctcggtctaccagttgctgggcaa
acctcagaatttgttaaccaagtgttagagaagactgcagaagggaatcccactggaggc
cttgtaggattaaggataccaacatcaaaggtgtaa

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_3|194_aa
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQD
LEQLAKEQDKESEKQLLLQEVENHKKQMLRKTTKESLAQTSSTITESLMGISRMMAQQVQ
QSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLA
TVLYIVKKRLFPFL

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_3|585_bp
atggcggctccccaagacgtccacgtccggatctgtaaccaagagattgtcaaatttgac
ctggaggtgaaggcgcttattcaggatatccgtgattgttcaggacccttaagtgctctt
actgaactgaatactaaagtaaaagagaaatttcaacagttgcgtcacagaatacaggac
ctggagcagttggctaaagagcaagacaaagaatcagagaaacaacttctactccaggaa
gtggagaatcacaaaaagcagatgctcaggaaaaccaccaaagagagcctggcccagaca
tccagtaccatcactgagagcctcatggggatcagcaggatgatggcccagcaggtccag
cagagcgaggaggccatgcagtctctagtcacttcttcacgaacgatcctggatgcaaat
gaagaatttaagtccatgtcgggcaccatccagctgggccggaagcttatcacaaaatac
aatcgccgggagctgacggacaagcttctcatcttccttgcgctagccctgtttcttgct
acggtcctctatattgtgaaaaagcggctctttccatttttgtga

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_4|150_aa
MDTDVDLHSIGGMSKDLQPRFKTTTGGHWRILKEAMACASEREGLTQGTNLNEESPAALG
PVRSCQNDPSKAQGGPSHQWPFHMDLLQMTSLAEGPGGRDMTPFSQPSSQSVRNWVALQE
VSRQRALPPELYPLSDQQRHEILIGARTLL

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_4|453_bp
atggacacagacgtagacctgcactccataggaggaatgtcaaaggatttgcagccacgt
tttaaaaccaccacaggaggccactggagaattctcaaggaggccatggcatgtgcctct
gaaagagaggggctgacgcagggcaccaacttgaatgaggaaagtccggctgcattgggc
ccagtcagaagctgccagaatgacccaagcaaggcacagggaggcccaagccaccagtgg
cctttccacatggacttgctgcaaatgaccagtctggctgagggccctgggggccgggac
atgacacccttctctcagccctcatcacagtctgtgaggaactgggtggccctgcaggag
gtcagccgccagcgagcattaccgcctgagctctacccactgtcggatcagcagcggcat
gagattctcataggagcgagaaccctattgtga

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_5|73_aa
MEQLEEDLRREFKTEGAARAKALRNRRGFVLSCASEERHPLRGHWMPHAFDVKVPFENGP
TLYQQVPETPPGY

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_5|222_bp
atggagcagctggaggaagatctgagaagagagtttaagacagagggagcagctcgtgca
aaggccctgagaaacaggagaggtttcgtcctgagctgtgcaagtgaggagcgtcaccct
ctgagagggcactggatgccacacgctttcgatgtcaaggtcccttttgaaaatggccct
actctgtaccaacaagttccagagacaccaccaggctactaa

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_6|60_aa
MPEPAPDAVGSCAAPASPTSAAPCSTAPGPIDCPRAEECRRKHHGTGRQLRLRPGSRTTE

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_6|183_bp
atgcctgagcctgcccctgacgccgtgggctcctgcgcggccccagcctccccgacgagc
gccgccccctgctccacggcgcccggtcccatcgactgcccaagggctgaggagtgccgg
cgcaagcaccacgggactggcaggcagctccgcctgcggcccgggtccaggaccactgag
tga

>gi568815593f:173044546_173263918|GENSCAN_predicted_peptide_7|759_aa
XKLPNQPPTWVTPADKATPLQGWCLHGNMKTQGYPCVPEKHQTRGHGEAPRAAKEREAEK
KWAGEPLSGAPRYGGRSSATCCPDTSRAGRRVRGRAAAPCREAARGRGQRRFLPPTWRCE
TGAATMFPSPALTPTPFSVKDILNLEQQQRSLAAAGELSARLEATLAPSSCMLAAFKPEA
YAGPEAAAPGLPELRAELGRAPSPAKCASAFPAAPAFYPRAYSDPDPAKDPRAEKKELCA
LQKAVELEKTEADNAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVL
KLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSA
PYAPAYGVGLNPYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPSPAQPATAAANNNFVNF
GVGDLNAVQSPGIPQSNSGVSTLHACFQMEKPRTQALGKRSQAPQMPPDATSGPHQLPVG
LSAEAGPQRGVLRMVLTSSCDRETEEVTWVVKIIQSLSGNGSWETHRTHTGESVPEARAR
HTVDVSPVKMQTEWLQAALSRTQTLASGDARKPQVSPLTRKHHAVPRGSSTVFPAAPAPR
ILREAFRAQAQRFYAAGNSLVASKPCRLPYQAELLEKGACGLPLIYHSQSLSRARHCSEL
FTSEPIESLFIPLGYREETDEGFILNPERRSTLPRVTQLVNSEDKRALAKLVEAIRTNYN
DKYDEIHRHWGGSVLGPKSVVHIAKLEKAKAKELATKLG

>gi568815593f:173044546_173263918|GENSCAN_predicted_CDS_7|2280_bp
nngaaattaccaaatcagcctccaacctgggtaacaccagctgataaagcgactcctttg
caaggctggtgtctgcatgggaacatgaaaacccaaggctatccctgtgtgccggaaaag
catcagaccagaggccatggagaagccccacgagcagcgaaggaaagagaagcagaaaaa
aagtgggcaggtgaacctttgtcaggggcaccccgctacggaggaaggtcaagcgctacc
tgctgcccggacacatccagagctggccgacgggtgcgcgggcgggcggcggcaccatgc
agggaagctgccaggggccgtgggcagcgccgctttctgccgcccacctggcgctgtgag
actggcgctgccaccatgttccccagccctgctctcacgcccacgcccttctcagtcaaa
gacatcctaaacctggaacagcagcagcgcagcctggctgccgccggagagctctctgcc
cgcctggaggcgaccctggcgccctcctcctgcatgctggccgccttcaagccagaggcc
tacgctgggcccgaggcggctgcgccgggcctcccagagctgcgcgcagagctgggccgc
gcgccttcaccggccaagtgtgcgtctgcctttcccgccgcccccgccttctatccacgt
gcctacagcgaccccgacccagccaaggaccctagagccgaaaagaaagagctgtgcgcg
ctgcagaaggcggtggagctggagaagacagaggcggacaacgcggagcggccccgggcg
cgacggcggaggaagccgcgcgtgctcttctcgcaggcgcaggtctatgagctggagcgg
cgcttcaagcagcagcggtacctgtcggcccccgaacgcgaccagctggccagcgtgctg
aaactcacgtccacgcaggtcaagatctggttccagaaccggcgctacaagtgcaagcgg
cagcggcaggaccagactctggagctggtggggctgcccccgccgccgccgccgcctgcc
cgcaggatcgcggtgccagtgctggtgcgcgatggcaagccatgcctaggggactcggcg
ccctacgcgcctgcctacggcgtgggcctcaatccctacggttataacgcctaccccgcc
tatccgggttacggcggcgcggcctgcagccctggctacagctgcactgccgcttacccc
gccgggccttccccagcgcagccggccactgccgccgccaacaacaacttcgtgaacttc
ggcgtcggggacttgaatgcggttcagagccccgggattccgcagagcaactcgggagtg
tccacgctgcatgcctgtttccagatggaaaagccaagaacccaagcccttggcaagcgt
tctcaggctcctcagatgcccccagatgccacgtcggggcctcatcagctgcccgtggga
ctgagtgccgaggctggaccccagagaggtgtcctgcggatggtgctcacctccagctgt
gaccgggaaactgaggaggttacgtgggtggtcaagatcatccagtctctaagcgggaac
gggagctgggaaacacacaggacacatactggggagagtgttcctgaagccagagcccgc
cacactgtggatgtctctccagtaaagatgcagacagaatggctccaggccgcgctgagc
agaacccagactcttgccagtggggacgcgcggaagccgcaggtttcaccgctgactcgg
aaacatcacgcggtcccgcgcgggagtagcaccgtcttccccgcagcgcccgcccctcgc
atcctccgggaagcattccgagctcaggcccagcgcttctacgccgcaggcaacagcctt
gtggcctctaagccttgccgactcccctaccaggctgagctcctggagaaaggggcctgt
ggcctgcctttaatttatcactcacagagtttatcgcgtgccaggcactgttctgagctc
tttacaagtgaacccattgaatccctttttatacctctgggttatcgtgaggaaacagat
gaaggattcattttaaacccagaaagaaggagtacgttgcccagggtcacacagctggtt
aactcagaagacaaaagagctttggctaagctggtggaagctatcaggaccaattacaac
gacaaatatgatgagatccaccgtcactggggaggcagtgtcctgggtcccaagtctgtg
gttcacatcgccaagcttgaaaaggcaaaggctaaagaacttgccaccaaactgggttaa