Result of FASTA (omim) for pF1KB5866
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5866, 491 aa
  1>>>pF1KB5866 491 - 491 aa - 491 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7783+/-0.000321; mu= 17.7889+/- 0.020
 mean_var=97.8636+/-19.338, 0's: 0 Z-trim(117.9): 85  B-trim: 23 in 1/53
 Lambda= 0.129647
 statistics sampled from 30220 (30305) to 30220 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.355), width:  16
 Scan time:  9.950

The best scores are:                                      opt bits E(85289)
NP_005132 (OMIM: 134830,202400,616004) fibrinogen  ( 491) 3434 652.5 7.9e-187
NP_001171670 (OMIM: 134830,202400,616004) fibrinog ( 432) 2653 506.4 6.8e-143
NP_000500 (OMIM: 134850,202400,616004) fibrinogen  ( 437)  560 114.9 4.8e-25
NP_068656 (OMIM: 134850,202400,616004) fibrinogen  ( 453)  560 114.9 4.9e-25
XP_016868722 (OMIM: 605776) PREDICTED: fibrinogen- ( 282)  338 73.2 1.1e-12
XP_016868721 (OMIM: 605776) PREDICTED: fibrinogen- ( 312)  338 73.2 1.2e-12
NP_963847 (OMIM: 605776) fibrinogen-like protein 1 ( 312)  338 73.2 1.2e-12
NP_963846 (OMIM: 605776) fibrinogen-like protein 1 ( 312)  338 73.2 1.2e-12
NP_671736 (OMIM: 605776) fibrinogen-like protein 1 ( 312)  338 73.2 1.2e-12
NP_004458 (OMIM: 605776) fibrinogen-like protein 1 ( 312)  338 73.2 1.2e-12
NP_036230 (OMIM: 605001) angiopoietin-related prot ( 493)  302 66.7 1.8e-10
NP_006673 (OMIM: 605351) fibroleukin precursor [Ho ( 439)  287 63.8 1.1e-09
NP_001138578 (OMIM: 613357) fibrinogen C domain-co ( 461)  272 61.0 8.2e-09
NP_116232 (OMIM: 613357) fibrinogen C domain-conta ( 461)  272 61.0 8.2e-09
NP_000499 (OMIM: 105200,134820,202400,616004) fibr ( 866)  275 61.8 8.9e-09
XP_016868807 (OMIM: 601922) PREDICTED: angiopoieti ( 443)  271 60.8   9e-09
NP_001112360 (OMIM: 601922) angiopoietin-2 isoform ( 444)  271 60.8 9.1e-09
NP_001112359 (OMIM: 601922) angiopoietin-2 isoform ( 495)  271 60.9 9.8e-09
NP_001138 (OMIM: 601922) angiopoietin-2 isoform a  ( 496)  271 60.9 9.8e-09
NP_001309738 (OMIM: 603705) angiopoietin-4 isoform ( 410)  257 58.2 5.2e-08
XP_011527541 (OMIM: 603705) PREDICTED: angiopoieti ( 451)  257 58.2 5.6e-08
NP_057069 (OMIM: 603705) angiopoietin-4 isoform 1  ( 503)  257 58.3 6.1e-08
NP_647475 (OMIM: 605910,615881) angiopoietin-relat ( 406)  254 57.6 7.7e-08
XP_005272541 (OMIM: 605910,615881) PREDICTED: angi ( 424)  249 56.7 1.5e-07
XP_011526649 (OMIM: 609336) PREDICTED: angiopoieti ( 470)  248 56.6 1.9e-07
NP_001308340 (OMIM: 609336) angiopoietin-related p ( 470)  248 56.6 1.9e-07
XP_016882836 (OMIM: 609336) PREDICTED: angiopoieti ( 470)  248 56.6 1.9e-07
XP_011526652 (OMIM: 609336) PREDICTED: angiopoieti ( 470)  248 56.6 1.9e-07
NP_114123 (OMIM: 609336) angiopoietin-related prot ( 470)  248 56.6 1.9e-07
XP_011526651 (OMIM: 609336) PREDICTED: angiopoieti ( 537)  248 56.6 2.1e-07
XP_011526650 (OMIM: 609336) PREDICTED: angiopoieti ( 537)  248 56.6 2.1e-07
XP_005260148 (OMIM: 609336) PREDICTED: angiopoieti ( 551)  248 56.6 2.1e-07
XP_016872955 (OMIM: 607666) PREDICTED: angiopoieti ( 248)  242 55.2 2.5e-07
NP_001300980 (OMIM: 601667) angiopoietin-1 isoform ( 298)  242 55.3 2.9e-07
NP_775628 (OMIM: 604973,613860) ficolin-3 isoform  ( 288)  240 54.9 3.6e-07
NP_003656 (OMIM: 604973,613860) ficolin-3 isoform  ( 299)  240 54.9 3.7e-07
NP_001186788 (OMIM: 601667) angiopoietin-1 isoform ( 497)  242 55.4 4.2e-07
NP_001137 (OMIM: 601667) angiopoietin-1 isoform 1  ( 498)  242 55.4 4.2e-07
NP_002395 (OMIM: 600596) microfibril-associated gl ( 255)  238 54.5 4.3e-07
NP_001185624 (OMIM: 600596) microfibril-associated ( 279)  238 54.5 4.6e-07
XP_006717078 (OMIM: 601624) PREDICTED: ficolin-2 i ( 264)  236 54.1 5.7e-07
NP_056652 (OMIM: 601624) ficolin-2 isoform b precu ( 275)  236 54.1 5.9e-07
XP_011516694 (OMIM: 601624) PREDICTED: ficolin-2 i ( 302)  236 54.1 6.3e-07
NP_004099 (OMIM: 601624) ficolin-2 isoform a precu ( 313)  236 54.2 6.5e-07
NP_001994 (OMIM: 601252) ficolin-1 precursor [Homo ( 326)  231 53.2 1.3e-06
XP_005245634 (OMIM: 603874) PREDICTED: angiopoieti ( 491)  233 53.8 1.3e-06
NP_004664 (OMIM: 603874) angiopoietin-related prot ( 491)  233 53.8 1.3e-06
NP_835228 (OMIM: 607666) angiopoietin-related prot ( 388)  216 50.5   1e-05
NP_001315564 (OMIM: 601995) tenascin-R isoform 2 [ (1025)  219 51.4 1.4e-05
XP_011508251 (OMIM: 601995) PREDICTED: tenascin-R  (1199)  219 51.5 1.6e-05


>>NP_005132 (OMIM: 134830,202400,616004) fibrinogen beta  (491 aa)
 initn: 3434 init1: 3434 opt: 3434  Z-score: 3475.2  bits: 652.5 E(85289): 7.9e-187
Smith-Waterman score: 3434; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491)

               10        20        30        40        50        60
pF1KB5 MKRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEGFFSARGHRPLDKKREEAPSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MKRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEGFFSARGHRPLDKKREEAPSLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 PAPPPISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQEALLQQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PAPPPISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQEALLQQE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 LYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 QGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 VQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 RKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKM
              430       440       450       460       470       480

              490 
pF1KB5 SMKIRPFFPQQ
       :::::::::::
NP_005 SMKIRPFFPQQ
              490 

>>NP_001171670 (OMIM: 134830,202400,616004) fibrinogen b  (432 aa)
 initn: 2649 init1: 2649 opt: 2653  Z-score: 2686.4  bits: 506.4 E(85289): 6.8e-143
Smith-Waterman score: 2884; 88.0% identity (88.0% similar) in 491 aa overlap (1-491:1-432)

               10        20        30        40        50        60
pF1KB5 MKRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEGFFSARGHRPLDKKREEAPSLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
NP_001 MKRMVSWSFHKLKTMKHLLLLLLCVFLVKSQGVNDNEEGFFSARGHRPLDKKREEA----
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KB5 PAPPPISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQEALLQQE
                                                              :::::
NP_001 -------------------------------------------------------LLQQE
                                                                60 

              130       140       150       160       170       180
pF1KB5 RPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQ
              70        80        90       100       110       120 

              190       200       210       220       230       240
pF1KB5 LYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPCTVSCNIPVVSGKE
             130       140       150       160       170       180 

              250       260       270       280       290       300
pF1KB5 CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYK
             190       200       210       220       230       240 

              310       320       330       340       350       360
pF1KB5 QGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFT
             250       260       270       280       290       300 

              370       380       390       400       410       420
pF1KB5 VQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDP
             310       320       330       340       350       360 

              430       440       450       460       470       480
pF1KB5 RKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKM
             370       380       390       400       410       420 

              490 
pF1KB5 SMKIRPFFPQQ
       :::::::::::
NP_001 SMKIRPFFPQQ
             430  

>>NP_000500 (OMIM: 134850,202400,616004) fibrinogen gamm  (437 aa)
 initn: 806 init1: 295 opt: 560  Z-score: 570.7  bits: 114.9 E(85289): 4.8e-25
Smith-Waterman score: 827; 33.2% identity (64.2% similar) in 400 aa overlap (95-487:34-415)

           70        80        90       100       110       120    
pF1KB5 PISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQEALLQQERPIR
                                     :   :  .:  ::: : . . :   .  . 
NP_000 SLHPRNLILYFYALLFLSSTCVAYVATRDNCCILDERFGSYCPTTCGIADFLSTYQTKVD
            10        20        30        40        50        60   

          130       140       150       160       170       180    
pF1KB5 NSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLYID
       .... :.. .. : . .:   : .  ..  ..  ...  .  ....  : .. .. .  .
NP_000 KDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYE
            70        80        90       100       110       120   

          190       200       210       220        230       240   
pF1KB5 ETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQME-YCRTPCTVSCNIPVVSGKECEE
        .. ..  ...: :. : ..  .:: .:.  : ::.:  :. ::  . .:  ..::.:..
NP_000 ASILTH-DSSIRYLQEIYNSNNQKIVNLKEKV-AQLEAQCQEPCKDTVQIHDITGKDCQD
            130       140       150        160       170       180 

           250       260       270       280       290       300   
pF1KB5 IIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGF
       :  ::.. : .:.:.: .. . . :::...  ..::::.:.: :::::: ..:  ::.::
NP_000 IANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGF
             190       200       210       220       230       240 

           310       320       330         340       350       360 
pF1KB5 GNVATNTDGKNYCGLPGEYWLGNDKISQLTRMG--PTELLIEMEDWKGDKVKAHYGGFTV
       :... .  : .      :.::::.::  .. ..  :  : .:.:::.:    : :. : :
NP_000 GHLSPT--GTT------EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKV
               250             260       270       280       290   

             370        380       390          400       410       
pF1KB5 QNEANKYQISVNKYRG-TAGNALMDGASQLMGEN---RTMTIHNGMFFSTYDRDNDGWLT
         ::.::...   . :  ::.:. :: .  .:..   . .: :::: :::.: ::: .  
NP_000 GPEADKYRLTYAYFAGGDAGDAF-DGFD--FGDDPSDKFFTSHNGMQFSTWDNDNDKF--
           300       310        320         330       340          

       420       430       440       450       460       470       
pF1KB5 SDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSM
          . .:...::.:::.:.:::.. :: :: :: :.   . .: :.:..: .::  ::::
NP_000 ---EGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSM
         350       360       370       380       390       400     

       480       490                   
pF1KB5 RKMSMKIRPFFPQQ                  
       .: .::: ::                      
NP_000 KKTTMKIIPFNRLTIGEGQQHHLGGAKQAGDV
         410       420       430       

>>NP_068656 (OMIM: 134850,202400,616004) fibrinogen gamm  (453 aa)
 initn: 779 init1: 295 opt: 560  Z-score: 570.4  bits: 114.9 E(85289): 4.9e-25
Smith-Waterman score: 827; 33.2% identity (64.2% similar) in 400 aa overlap (95-487:34-415)

           70        80        90       100       110       120    
pF1KB5 PISGGGYRARPAKAAATQKKVERKAPDAGGCLHADPDLGVLCPTGCQLQEALLQQERPIR
                                     :   :  .:  ::: : . . :   .  . 
NP_068 SLHPRNLILYFYALLFLSSTCVAYVATRDNCCILDERFGSYCPTTCGIADFLSTYQTKVD
            10        20        30        40        50        60   

          130       140       150       160       170       180    
pF1KB5 NSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLYID
       .... :.. .. : . .:   : .  ..  ..  ...  .  ....  : .. .. .  .
NP_068 KDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYE
            70        80        90       100       110       120   

          190       200       210       220        230       240   
pF1KB5 ETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQME-YCRTPCTVSCNIPVVSGKECEE
        .. ..  ...: :. : ..  .:: .:.  : ::.:  :. ::  . .:  ..::.:..
NP_068 ASILTH-DSSIRYLQEIYNSNNQKIVNLKEKV-AQLEAQCQEPCKDTVQIHDITGKDCQD
            130       140       150        160       170       180 

           250       260       270       280       290       300   
pF1KB5 IIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWDPYKQGF
       :  ::.. : .:.:.: .. . . :::...  ..::::.:.: :::::: ..:  ::.::
NP_068 IANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGF
             190       200       210       220       230       240 

           310       320       330         340       350       360 
pF1KB5 GNVATNTDGKNYCGLPGEYWLGNDKISQLTRMG--PTELLIEMEDWKGDKVKAHYGGFTV
       :... .  : .      :.::::.::  .. ..  :  : .:.:::.:    : :. : :
NP_068 GHLSPT--GTT------EFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKV
               250             260       270       280       290   

             370        380       390          400       410       
pF1KB5 QNEANKYQISVNKYRG-TAGNALMDGASQLMGEN---RTMTIHNGMFFSTYDRDNDGWLT
         ::.::...   . :  ::.:. :: .  .:..   . .: :::: :::.: ::: .  
NP_068 GPEADKYRLTYAYFAGGDAGDAF-DGFD--FGDDPSDKFFTSHNGMQFSTWDNDNDKF--
           300       310        320         330       340          

       420       430       440       450       460       470       
pF1KB5 SDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSM
          . .:...::.:::.:.:::.. :: :: :: :.   . .: :.:..: .::  ::::
NP_068 ---EGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYSM
         350       360       370       380       390       400     

       480       490                                   
pF1KB5 RKMSMKIRPFFPQQ                                  
       .: .::: ::                                      
NP_068 KKTTMKIIPFNRLTIGEGQQHHLGGAKQVRPEHPAETEYDSLYPEDDL
         410       420       430       440       450   

>>XP_016868722 (OMIM: 605776) PREDICTED: fibrinogen-like  (282 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.8  bits: 73.2 E(85289): 1.1e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:7-279)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
XP_016                         MRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
                                       10        20        30      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
XP_016 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         40           50        60        70        80         90  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
XP_016 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            100       110                120       130       140   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
XP_016 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           150       160       170       180          190       200

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
XP_016 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              210            220       230       240               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
XP_016 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     250       260       270       280  

>>XP_016868721 (OMIM: 605776) PREDICTED: fibrinogen-like  (312 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.2  bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:37-309)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
XP_016 FILVTTALTMGREISALEDCAQEQMRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
         10        20        30        40        50        60      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
XP_016 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         70           80        90       100       110        120  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
XP_016 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            130       140                150       160       170   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
XP_016 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           180       190       200       210          220       230

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
XP_016 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              240            250       260       270               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
XP_016 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     280       290       300       310  

>>NP_963847 (OMIM: 605776) fibrinogen-like protein 1 pre  (312 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.2  bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:37-309)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
NP_963 FILVTTALTMGREISALEDCAQEQMRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
         10        20        30        40        50        60      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
NP_963 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         70           80        90       100       110        120  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
NP_963 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            130       140                150       160       170   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
NP_963 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           180       190       200       210          220       230

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
NP_963 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              240            250       260       270               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
NP_963 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     280       290       300       310  

>>NP_963846 (OMIM: 605776) fibrinogen-like protein 1 pre  (312 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.2  bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:37-309)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
NP_963 FILVTTALTMGREISALEDCAQEQMRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
         10        20        30        40        50        60      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
NP_963 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         70           80        90       100       110        120  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
NP_963 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            130       140                150       160       170   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
NP_963 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           180       190       200       210          220       230

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
NP_963 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              240            250       260       270               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
NP_963 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     280       290       300       310  

>>NP_671736 (OMIM: 605776) fibrinogen-like protein 1 pre  (312 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.2  bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:37-309)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
NP_671 FILVTTALTMGREISALEDCAQEQMRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
         10        20        30        40        50        60      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
NP_671 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         70           80        90       100       110        120  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
NP_671 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            130       140                150       160       170   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
NP_671 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           180       190       200       210          220       230

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
NP_671 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              240            250       260       270               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
NP_671 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     280       290       300       310  

>>NP_004458 (OMIM: 605776) fibrinogen-like protein 1 pre  (312 aa)
 initn: 575 init1: 162 opt: 338  Z-score: 348.2  bits: 73.2 E(85289): 1.2e-12
Smith-Waterman score: 657; 39.0% identity (65.7% similar) in 300 aa overlap (195-489:37-309)

          170       180       190       200       210       220    
pF1KB5 NENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCR
                                     .:.:.. ... . ::..: ..  .:.    
NP_004 FILVTTALTMGREISALEDCAQEQMRLRAQVRLLETRVKQQQVKIKQLLQENEVQFLDKG
         10        20        30        40        50        60      

          230       240          250       260       270       280 
pF1KB5 TPCTVSCNIPVVSGKE---CEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTV
          ::   : . : ..   : ::.  : . : .: :.: .:   . ::::: ...:::::
NP_004 DENTV---IDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDM-SDGGGWTV
         70           80        90       100       110        120  

             290       300       310       320       330       340 
pF1KB5 IQNRQDGSVDFGRKWDPYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELL
       :: :.::: .:.: :  :..:::         :.    ::::::: ..  :: .    : 
NP_004 IQRRSDGSENFNRGWKDYENGFG---------NFVQKHGEYWLGNKNLHFLTTQEDYTLK
            130       140                150       160       170   

             350       360       370       380       390       400 
pF1KB5 IEMEDWKGDKVKAHYGGFTVQNEANKYQISVNKYRGTAGNALMDGASQLMGENRTMTIHN
       :.. :.. ..  :.: .: : .: : :......: ::::..:   :...  : .  . :.
NP_004 IDLADFEKNSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSL---AGNFHPEVQWWASHQ
           180       190       200       210          220       230

             410       420       430       440       450       460 
pF1KB5 GMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGQYTWDMAKHGT
        : :::.:::.:..     . .:..:: .:::.::::.:: :: :: .: ::   ::  :
NP_004 RMKFSTWDRDHDNY-----EGNCAEEDQSGWWFNRCHSANLNGVYY-SGPYT---AK--T
              240            250       260       270               

             470       480         490  
pF1KB5 DDGVVWMNWKGSWYSMRKMSMKIRP--FFPQQ 
       :.:.::..:.: :::.... :::::  :.:   
NP_004 DNGIVWYTWHGWWYSLKSVVMKIRPNDFIPNVI
     280       290       300       310  




491 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 16:33:04 2016 done: Sat Nov  5 16:33:06 2016
 Total Scan time:  9.950 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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