GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:31:21

Sequence gi568815596f:87967865_88210509 : 242645 bp : 43.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4691   4750   60  1  0   94   22   142 0.581   7.45
 1.02 Term +   4774   5253  480  0  0    5   42   314 0.648  13.30
 1.03 PlyA +   5830   5835    6                              -0.45

 2.11 PlyA -   6604   6599    6                               1.05
 2.10 Term -   8990   8910   81  2  0  114   48    57 0.543   1.99
 2.09 Intr -  21972  21832  141  0  0   55   94    25 0.291   0.35
 2.08 Intr -  24994  24860  135  1  0   69   94    55 0.708   4.96
 2.07 Intr -  32420  32375   46  1  1  131   96    16 0.544   5.11
 2.06 Intr -  36464  36440   25  0  1   87   82    -4 0.218  -4.02
 2.05 Intr -  49324  49103  222  2  0   51  109   113 0.395   7.80
 2.04 Intr -  60721  60006  716  0  2   87   85   294 0.219  20.08
 2.03 Intr -  65069  65044   26  2  2   96   77    15 0.015  -1.98
 2.02 Intr -  87698  87525  174  2  0   87   36    59 0.174   0.74
 2.01 Init -  88916  88863   54  2  0   79   88    58 0.612   4.18
 2.00 Prom -  92150  92111   40                              -3.76

 3.00 Prom +  95987  96026   40                              -4.86
 3.01 Init + 100016 100137  122  1  2   79   80   161 0.833  14.06
 3.02 Intr + 116452 116628  177  1  0   98   94   222 0.983  22.83
 3.03 Intr + 119998 120211  214  1  1   91   54   407 0.998  36.32
 3.04 Intr + 123148 123278  131  0  2   91   89   122 0.997  12.09
 3.05 Intr + 128731 128920  190  1  1   77   81   316 0.991  29.39
 3.06 Intr + 135194 135286   93  1  0   81   94    30 0.861   3.06
 3.07 Intr + 138461 138624  164  1  2   84   42   240 0.827  17.77
 3.08 Intr + 140507 140735  229  2  1  101   65   140 0.487  10.87
 3.09 Term + 142490 142648  159  1  0  109   55   256 0.995  22.34
 3.10 PlyA + 142899 142904    6                               1.05

 4.05 PlyA - 143603 143598    6                               1.05
 4.04 Term - 148837 148694  144  1  0   44   48    89 0.048  -1.59
 4.03 Intr - 156722 156630   93  2  0  106  101   145 0.959  17.76
 4.02 Intr - 158484 158312  173  1  2   24   97   221 0.897  16.26
 4.01 Init - 160153 160087   67  1  1  104  109    94 0.978  14.33
 4.00 Prom - 160544 160505   40                              -3.46

 5.04 PlyA - 160912 160907    6                               1.05
 5.03 Term - 163444 163271  174  1  0   75   33    81 0.005  -0.94
 5.02 Intr - 182512 181991  522  1  0   73  -43   222 0.210   0.75
 5.01 Init - 182768 182610  159  2  0   60   91    71 0.534   4.42
 5.00 Prom - 183516 183477   40                              -2.96

 6.00 Prom + 194827 194866   40                              -3.76
 6.01 Init + 196780 196851   72  0  0   70   46   101 0.483   3.27
 6.02 Intr + 200824 200887   64  0  1   76   52    66 0.592   0.09
 6.03 Intr + 202423 202592  170  2  2  107   54    58 0.587   3.97
 6.04 Intr + 205275 205509  235  2  1   97  101   197 0.908  19.16
 6.05 Intr + 206775 206969  195  1  0   86   75   213 0.987  19.19
 6.06 Intr + 207385 207537  153  2  0   70   85   170 0.998  14.94
 6.07 Intr + 210919 211149  231  2  0  108  110   239 0.972  25.84
 6.08 Intr + 214835 214983  149  0  2   73   96   140 0.975  13.25
 6.09 Intr + 215084 215209  126  1  0   64   86   134 0.988  11.68
 6.10 Intr + 217464 217615  152  2  2   60   92   260 0.986  22.56
 6.11 Term + 218034 218259  226  0  1   88   38   257 0.792  16.95
 6.12 PlyA + 218741 218746    6                               1.05

 7.04 PlyA - 219774 219769    6                               1.05
 7.03 Term - 224493 224437   57  0  0   76   49    54 0.033  -2.01
 7.02 Intr - 226914 226809  106  2  1  111   92    16 0.052   4.52
 7.01 Init - 237134 237061   74  2  2   63   92    19 0.046   0.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  60755  60748    8  2  2   76   99    11 0.906   0.72


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_1|179_aa
MGRAGTMAVAAEVAGAGRLAGAVGGGMARASSGNGSEEAWGALRAPQQQLRELCPGVNNQ
PYLCESGHCCRETGCCTYYYELWWFWLLWTVLILFSCCWAFRHRRAKLRLQQQQRQREIN
LLAYHGACHGAGPFPTGSLLDLRLLSTFKPPAYEDVVHRPGTTPRPPPPRLILSPQAAP

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_1|540_bp
atgggccgggcagggaccatggcagtggcagcagaggtggcaggggcggggcggctggcg
ggggctgtaggtggaggtatggctcgggccagcagcgggaacggcagcgaggaggcctgg
ggggcacttcgggcgccgcaacagcagcttcgagagctgtgcccaggagtgaacaaccag
ccctacctctgtgagagtggtcactgctgcagggagactggctgctgcacctactactat
gagctctggtggttctggctgctctggactgtcctcatcctctttagctgctgttgggcc
ttccgccaccgacgagctaaactcaggctgcaacaacagcagcggcagcgtgaaatcaac
ttgttggcctatcatggggcatgccatggggctggtcctttccctaccggttcactgctt
gaccttcgcctcctcagcaccttcaagcccccagcctacgaggatgtggttcaccgccca
ggcaccaccccccgccccccgcctccgcgccttatactgtcgccccaggccgccccttga

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_2|539_aa
MDLARWLTPVIPALWEAEDRPRAPSPPGAPRVCEMADQGAARVPRTPHRPPPPERDARAS
EWSAEGRGARLAEEAEKWVLAVLARKSRFVNLMKHSKKTYDSFQDELEDYIKVQKARGLE
PKTCFRKMKGDYLETCGYKGEVNSRPTYRMFDQRLPSETIQTYPRSCNIPQTVENRLPQW
LPAHDSRLRLDSLSYCQFTRDCFSEKPVPLNFNQQEYICGSHGVEHRVYKHFSSDNSTST
HQASHKQIHQKRKRHPEEGREKSEEERSKHKRKKSCEEIDLDKHKSIQRKKTEVEIETVH
VSTEKLKNRKEKKSRDVVSKKEERRPPVRAEEEEPQLPRTESASRHLDRRPPTPWLRPAA
LVPIALYGLPFQHRGRYKAALSLPLILISDSSPMLSSAIRFKIDGMWLKLPDPLTEFSSS
QVGKVFIPGLPAPSLTMSNTMPQPSTSLDGVSAPKPLSKLLGSLDEVLLLFPVPELRDSS
KLHDSLYNEDCTFQQLGTYIDSIRDPVHNRVTLLSVLYYKNNKTPTSQNCKWFMAPHID

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_2|1620_bp
atggacctggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggacagg
cctcgcgcgcccagcccgccgggcgcgccccgagtgtgcgaaatggccgaccagggcgcg
gcccgagtcccgcgcacccctcaccggccgccgcccccggaaagagacgccagggcttcc
gagtggagtgcggagggaaggggcgctcggcttgcggaggaagccgagaaatgggttctt
gctgtgttggccagaaaatcccgttttgtcaacctaatgaagcattcaaagaagacatat
gactcttttcaagatgaacttgaagattatattaaagtacagaaagccagaggcttagag
ccaaagacttgtttcagaaagatgaaaggggactatttggaaacctgtgggtacaaagga
gaggttaattccagacccacgtatagaatgtttgaccagagactcccatctgaaaccatc
cagacctacccaagatcatgcaatattccacaaacagtggaaaatcggttgcctcagtgg
ttaccagcccatgacagcagattgagactagactctctgagctactgtcagttcacgagg
gactgtttctcagaaaaaccagtacccctgaactttaatcaacaagaatatatttgtggc
tcacatggtgtagaacatagagtttacaagcacttctcctcagataacagtaccagtact
catcaagccagtcacaaacagatacatcagaagaggaaaaggcacccagaggaaggcaga
gaaaaatcagaggaggagcggtctaagcataagagaaaaaaaagctgcgaggaaattgac
ttagacaaacacaagagcatccaaagaaagaaaacagaggtggaaatagaaaccgtacat
gtcagtacagaaaagcttaagaatcgaaaggagaaaaaaagccgagatgtagtctctaag
aaagaggaacgtcgcccgccggtgagggcggaggaggaagaaccgcagctcccgaggaca
gaatccgcttcaaggcaccttgaccgtcgcccacccacaccctggctgcggcccgccgcc
ctggtccccatcgcgctgtacggtcttcccttccaacaccgagggcgttacaaggccgcc
ctgtccctgccactcattcttattagtgactcctcccccatgctttcctcagctattaga
tttaaaatagatggaatgtggctcaagctgcctgacccgctgacagagttctcttcctcc
caggtgggaaaggtttttattcctggactgccagctccctctctgacgatgtccaacaca
atgcctcagcccagtacttcacttgatggcgttagtgctccaaagcctcttagtaaactc
cttggatcattggacgaggttcttctgttgttcccagttccagaactgagggattcttca
aaacttcatgattctctctataatgaggattgtactttccaacagcttggaacttacatt
gattctatcagagatcctgtccataacagagtcaccctactttctgtcctgtactacaag
aacaacaaaactccaactagtcagaattgcaagtggtttatggccccccatatagattga

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_3|492_aa
MENVEVFTAEGKGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRC
GQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRVEREGTGLTEGC
LVSVDDLQNHVEHFGEEEQKDLRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLS
DQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGKIELRALGKISEGEELTVSYIDFLNV
SEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGVKDNPKPSQEVVKEMIQFSKDTLEKIDK
ARSEGLYHEVVKLCRECLEKQEPVFADTNIYMLRMLSIVSEVLSYLQAFEEASFYARRMV
DGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHPITKDLE
ASSVLRLVFPSWPELSEDGSAMRVQTEMELRMFRQNEFMYYKMREAALNNQPMQVMAEPS
NEPSPALFHKKQ

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_3|1479_bp
atggagaacgtggaggtcttcaccgctgagggcaaaggaaggggtctgaaggccaccaag
gagttctgggctgcagatatcatctttgctgagcgggcttattccgcagtggtttttgac
agccttgttaattttgtgtgccacacctgcttcaagaggcaggagaagctccatcgctgt
gggcagtgcaagtttgcccattactgcgaccgcacctgccagaaggatgcttggctgaac
cacaagaatgaatgttcggccatcaagagatatgggaaggtgcccaatgagaacatcagg
ctggcggcgcgcatcatgtggcgggtggagagagaaggcaccgggctcacggagggctgc
ctggtgtccgtggacgacttgcagaaccacgtggagcactttggggaggaggagcagaag
gacctgcgggtggacgtggacacattcttgcagtactggccgccgcagagccagcagttc
agcatgcagtacatctcgcacatcttcggagtgattaactgcaacggttttactctcagt
gatcagagaggcctgcaggccgtgggcgtaggcatcttccccaacctgggcctggtgaac
catgactgttggcccaactgtactgtcatatttaacaatggcaaaattgagctccgggcc
ctaggcaagatctcagaaggagaggagctgactgtgtcctatattgacttcctcaacgtt
agtgaagaacgcaagaggcagctgaagaagcagtactactttgactgcacatgtgaacac
tgccagaaaaaactgaaggatgacctcttcctgggggtgaaagacaaccccaagccctct
caggaagtggtgaaggagatgatacaattctccaaggatacattggaaaagatagacaag
gctcgttccgagggtttgtatcatgaggttgtgaaattatgccgggagtgcctggagaag
caggagccagtgtttgctgacaccaacatctacatgctgcggatgctgagcattgtttcg
gaggtcctttcctacctccaggcctttgaggaggcctcgttctatgccaggaggatggtg
gacggctatatgaagctctaccaccccaacaatgcccaactgggcatggccgtgatgcgg
gcagggctgaccaactggcatgctggtaacattgaggtggggcacgggatgatctgcaaa
gcctatgccattctcctggtgacacacggaccctcccaccccatcactaaggacttagag
gcaagtagcgtcttgaggctggtgttcccttcctggcctgagctttctgaggatgggagt
gccatgcgggtgcagacggagatggagctacgcatgttccgccagaacgaattcatgtac
tacaagatgcgcgaggctgccctgaacaaccagcccatgcaggtcatggccgagcccagc
aatgagccatccccagctctgttccacaagaagcaatga

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_4|158_aa
MSFSGKYQLQSQENFEAFMKAIGLPEELIQKGKDIKGVSEIVQNGKHFKFTITAGSKVIQ
NEFTVGEECELETMTGEKVKTVVQLEGDNKLVTTFKNIKSVTELNGDIITNSPAGASYWL
NEKEEVSLSDTKQGREEWRRPVGEMEKNQHNGNSFSCK

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_4|477_bp
atgagtttctccggcaagtaccaactgcagagccaggaaaactttgaagccttcatgaag
gcaatcggtctgccggaagagctcatccagaaggggaaggatatcaagggggtgtcggaa
atcgtgcagaatgggaagcacttcaagttcaccatcaccgctgggtccaaagtgatccaa
aacgaattcacggtgggggaggaatgtgagctggagacaatgacaggggagaaagtcaag
acagtggttcagttggaaggtgacaataaactggtgacaactttcaaaaacatcaagtct
gtgaccgaactcaacggcgacataatcaccaattctcctgctggtgcttcttattggtta
aatgagaaagaagaagtcagcctttctgacacaaagcagggcagagaagagtggagaagg
cctgtgggagaaatggagaaaaaccagcacaatgggaactccttcagttgcaagtga

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_5|284_aa
MSELPFTIASKRIKYLGIQLTTDVKDLFKENYKPLLNEIKEDTNKWKNILCSQNWEKTTL
KFIWNQKRARIAKSILSQKNKAGGISLPDFKLYYKATVTKTAWYWYQNRDIDQWNGTEPS
EIMPHIYNYLIFDKPDKNKKWGKDSLFNKWCWENWLAMCRKLKLDPFLTPYTKINSRWIK
DLNVRPKTIKTLEENLGNTIQDVGMVKDFMSKTPKAMATKAKIDKWDTPGKVHLVPTSPE
ASGVGADLLYGEAFMTLLPTPLRRSQKAAVWGMILDICDQGERA

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_5|855_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaacggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattctatgctcacagaattgggaaaaaactacttta
aagttcatatggaaccaaaaaagagcccgcattgccaagtcaatcctaagccaaaagaac
aaagctggaggcatctcgctacctgacttcaaactgtactacaaggctacagtaaccaaa
acagcatggtactggtaccaaaacagagatatagaccaatggaatggaacagagccctca
gaaataatgccacatatctacaactatctgatctttgacaaacctgacaaaaacaagaaa
tggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatgtgtaga
aagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatggattaaa
gacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaataccatt
caggacgtgggcatggtcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatacaccaggaaaggtgcacctggtccctacttcacctgag
gcctccggggttggtgctgacttgctctatggagaagctttcatgacgctccttcccact
cccctccgtagatcccagaaagcagcagtgtggggcatgatacttgacatttgcgatcaa
ggggagagggcctag

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_6|590_aa
MAMRIVEALITGVLGPVLLLGEWTNHKGLQARVSVAEGLWERSVEGPSHCEAENPSSGPD
RKPHRTVRDADSGVRTFAARAALLRTGPRAPRPAPRAPRPAPASRIMWYVSTRGVAPRVN
FEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELLPKDELN
DLIDRAFSRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKH
VTVVVGTSGDTGSAAIESVQGAKNMDIIVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGN
SDELDEPIKTVFADVAFVKKHNLMSLNSINWSRVLVQMAHHFFAYFQCTPSLDTHPLPLV
EVVVPTGAAGNLAAGYIAQKIGLPIRLVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAM
DIQVPYNMERVFWLLSGSDSQVTRALMEQFERTQSVNLPKELHSKLSEAVTSVSVSDEAI
TQTMGRCWDENQYLLCPHSAVAVNYHYQQIDRQQPSTPRCCLAPASAAKFPEAVLAAGLT
PETPAEIVALEHKETRCTLMRRGDNWMLMLRDTIEDLSRQWRSHALNTSQ

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_6|1773_bp
atggcgatgcgaattgtggaggctttaatcactggtgtgctgggaccagttctgctgctg
ggagaatggactaatcacaaaggcctgcaggcccgtgtaagtgtggcagagggcttgtgg
gagaggtccgtggaaggtccttcccactgcgaagctgagaaccctagctccggccccgac
cggaagccccaccgcaccgtcagggacgcggactcgggagtgcgcacattcgcagcccgg
gcagccctgctgcgcaccgggcctcgcgccccgcgccccgcgccccgcgccccgcgcccc
gcaccggcctccaggatcatgtggtatgtcagcaccaggggcgtagccccacgggtcaac
tttgagggggccctcttctctggctatgcacctgacgggggcctctttatgcctgaagag
ctcccacagttggacagagggaccctgtgccagtggagcacactctcctatcctggcctg
gtgaaggagctgtgtgccctcttcattggctctgagctccttccaaaagatgaattaaat
gatctgatcgaccgagccttcagcagattccgtcacagagaagtggtccatctgtccagg
ttgaggaatgggctgaacgtgttggagctgtggcatggcgtcacatatgcatttaaggac
ctgtccctgtcctgcacaacacagttcctgcagtacttcctggagaagagggagaagcac
gtcactgtggttgtaggaacatctggggacacaggaagtgctgccattgagagtgttcaa
ggggcaaagaacatggacattatcgttctgctgcccaaaggtcactgcacaaagattcag
gagctccagatgacaacggtgctgaagcagaacgtacatgtgtttggagtggagggaaac
agcgatgagctcgatgagccgatcaagactgtgtttgccgatgtggcttttgtcaagaag
cacaatctgatgagcctgaattcgatcaactggtcccgggtcctggtgcagatggcccat
cacttctttgcttacttccagtgtacgccatccttggacacacatcccctacccctggtg
gaggtggttgtgccaacaggggctgccggtaaccttgcagctgggtacattgctcaaaag
ataggcctgcccatccgtctggtcgtggcagtgaaccgcaatgacatcatccacaggact
gtccagcagggagacttctctctctctgaggctgttaaatcaaccttggcatcagctatg
gacattcaggtgccctacaacatggagagggtgttctggctgctctctggctctgacagc
caggtgacaagagccctcatggagcagtttgaaaggacccaaagtgtgaatctgcccaag
gaactgcacagcaagctttcagaggcagtgacatccgtgtcagtgtcggatgaagccatc
acccagaccatgggccgctgctgggatgagaaccagtacttgctgtgcccccactcagcg
gtggccgtgaactaccattaccagcagatagacaggcagcagcccagcactccccggtgc
tgcctcgcccctgcctctgcagccaagttcccggaagctgtcctggctgctggcctgacc
cctgagactcccgcggagatcgtagccctggagcacaaggagacacgctgcaccctgatg
cggagaggtgacaactggatgctgatgcttcgggacaccattgaggaccttagccgacag
tggaggagtcatgccctcaacacctcccagtag

>gi568815596f:87967865_88210509|GENSCAN_predicted_peptide_7|78_aa
MVCLIEKIWNQPKSPSINEWIKKLRRQGGCRGYKLHWLSPQWQEAPMVLNEFSLSQGQNQ
ASKEKQTEGTHIRQAGNK

>gi568815596f:87967865_88210509|GENSCAN_predicted_CDS_7|237_bp
atggtgtgccttattgaaaaaatatggaaccagccaaaaagcccatcaatcaatgagtgg
ataaagaaactacggcgacaaggtggctgcaggggctacaagttgcactggctttcaccc
cagtggcaagaggcacctatggtcctgaatgagttttccctatctcagggccagaaccag
gccagtaaggagaagcagacagaagggacacatatacgacaagctggcaacaagtga