GENSCAN 1.0	Date run:  5-Nov-116	Time: 16:08:07

Sequence gi568815578f:18042661_18287456 : 244796 bp : 43.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   2978   2973    6                               1.05
 1.02 Term -  14217  13649  569  1  2   68   41   509 0.662  38.78
 1.01 Init -  14974  14875  100  1  1  104   99   121 0.977  15.24
 1.00 Prom -  26443  26404   40                              -3.76

 2.00 Prom +  67692  67731   40                              -2.86
 2.01 Init +  83366  84492 1127  1  2   60   41   339 0.070  20.07
 2.02 Intr +  95157  95391  235  0  1   59   67   216 0.048  14.29
 2.03 Term +  99548  99697  150  1  0   88   38   119 0.324   4.81
 2.04 PlyA +  99816  99821    6                               1.05

 3.00 Prom +  99828  99867   40                             -13.15
 3.01 Init + 100001 100259  259  1  1   66   72   327 0.980  26.20
 3.02 Intr + 102573 102691  119  1  2  126   89    16 0.975   5.68
 3.03 Intr + 108161 108282  122  1  2  119   63    42 0.759   4.09
 3.04 Intr + 116424 116605  182  0  2   32   79    90 0.729   2.01
 3.05 Intr + 119163 119579  417  1  0   74   95   172 0.669  10.50
 3.06 Intr + 119717 120285  569  0  2   96   68   422 0.847  33.50
 3.07 Intr + 139050 139186  137  2  2   82   76   122 0.968   9.77
 3.08 Intr + 140529 140638  110  0  2   61   84    42 0.918   1.03
 3.09 Intr + 141942 142132  191  1  2   84  111    95 0.999  10.70
 3.10 Term + 144626 144799  174  1  0   71   44   110 0.799   2.66
 3.11 PlyA + 145353 145358    6                               1.05

 4.00 Prom + 169616 169655   40                               0.24
 4.01 Init + 173882 173956   75  1  0    7  115    59 0.276   1.59
 4.02 Term + 177413 177853  441  1  0   57   42   217 0.535   9.26
 4.03 PlyA + 178005 178010    6                               1.05

 5.00 Prom + 179637 179676   40                              -5.66
 5.01 Init + 179766 179770    5  2  2   49  105     0 0.315  -2.73
 5.02 Intr + 184093 184265  173  1  2   10   75   121 0.680   2.59
 5.03 Intr + 184450 184575  126  2  0   96   44    52 0.717   2.25
 5.04 Term + 185053 185411  359  2  2  -36   45   279 0.888   5.87
 5.05 PlyA + 185645 185650    6                               1.05

 6.00 Prom + 186310 186349   40                              -0.16
 6.01 Sngl + 204829 205737  909  0  0   86   39   231 0.984  14.30
 6.02 PlyA + 207763 207768    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_1|222_aa
MPKVFLVKRRSLGVSVRSWDELPDEKRADTYIPVGLGRLLHDPPEDCRSDGGSSSGSGSS
SAGEPGGAESSSSPHAPESETPEPGDAEGPDGHLATKQRPVARSKIKVLCRLCPRRHLHH
ALASGSRGRRPSLPRPPAQPGTRAPSAPAAPLLHLPLGGGQGASARPPARRVAAAQGRPV
PGVGSVLPVAPPDAECCLWNCRKGTGITAFRQQPVLCARPVE

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_1|669_bp
atgcccaaagtcttcctggtgaagaggaggagcctgggggtctcggtccgcagctgggat
gagctcccggatgagaaaagggcagacacctacatcccagtgggcctaggccgcctgctc
cacgacccccccgaggactgccgcagcgacggcggcagcagcagcggcagcggcagcagc
agcgcgggggagcctggaggagcagagagcagctcgtccccgcacgcccccgagagcgaa
acccccgagcccggcgacgccgagggccccgatggacacctggcgaccaagcagcgcccg
gtcgccagatcgaaaatcaaggtactgtgtcgactctgcccccgccgccacctgcaccac
gccctggcgtcgggctcccgaggccggcgcccctccctgccgcgcccgcctgcgcaaccc
ggcacccgcgccccgagcgcgcccgccgcgccgctcctgcacctgcccctgggcggcggc
cagggcgcctcggcgcgtcctcccgcccgcagggtagctgctgcgcaggggcggccggtt
cccggagtgggctccgtcctcccggtggccccgcctgatgccgagtgctgcctctggaac
tgccgaaaaggcacaggcatcactgccttccgccagcagcccgttctgtgcgctaggcct
gtagaataa

>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_2|503_aa
MSELPFTTASKRIKYLGIQLTMDVKDLFKENYKLLLSEIKEFTNKWNNIPCSWIGRLNIV
RMAILPQVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRTHIATSILSQKSKAGSITLP
DFKLYYKAAVTKTAWYWYQNRDIDQWNRIEPSEIIPHIYNHLIFDKPDKNKKWGKDFVFN
KWCWENWLAVCRKLKLDPFLTPYAKINSRWFKDLNVRLKTIKTLEENLGNTIQAIGMGKD
FMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFTIYPSDKGLISRI
YKELKQIYKKKSNNPIKKWAKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTTMRYH
LTPVRMAIIKKSGNNSGERRTRRLGLCARGVEPGQYRRRCALCGGLCASGGREREAAAAS
VGMSRSSKVVLGLSVLLTAATVAGVHVKQQWDQQRLRDGVIRDIERQIRKKENIRLLGEQ
IILTEQLEAEREKMLLAKGSQKS

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_2|1512_bp
atgagtgaactcccatttacaactgcttcaaagagaataaaatacctaggaatccagctt
acaatggatgtgaaggacctcttcaaggagaactacaaattactgctcagtgaaataaaa
gagttcacaaacaaatggaataacattccatgctcatggataggaagactcaatattgtg
agaatggccatactgccccaggtaatttataggttcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
acccacattgccacatcaatcctaagccaaaagagcaaagctggaagcatcacactacct
gacttcaaactatactacaaggctgcagtaaccaaaacagcatggtactggtaccaaaac
agagatatagaccaatggaacagaatagagccctcggaaataataccacacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaatggggaaaggatttcgtatttaat
aaatggtgctgggaaaactggctagccgtatgtagaaagctgaaactggatcccttcctt
acaccttatgcaaaaattaattcaagatggtttaaagacttaaatgttagacttaaaacc
ataaaaactctagaagaaaacctaggcaataccattcaggccataggcatgggcaaggac
ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaatttttacaatctacccatctgacaaagggttaatatccagaatc
tacaaagaacttaaacaaatttacaagaaaaaatcaaacaaccccatcaaaaagtgggca
aaggatatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaa
aaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagatatcat
ctcacaccagttagaatggcaatcattaaaaagtcaggaaataacagcggcgagcggcgc
acgcgacggctggggctctgcgctcgaggggtcgagcctgggcagtacaggcggcggtgc
gcactctgcggcggcctctgcgcctcgggcgggcgggagagagaggccgcggccgccagc
gtggggatgtctaggagctcgaaggtggtgctgggcctctcggtgctgctgacggcggcc
acagtggccggcgtacatgtgaagcagcagtgggaccagcagaggcttcgtgacggagtt
atcagagacattgagaggcaaattcggaaaaaagaaaacattcgtcttttgggagaacag
attattttgactgagcaacttgaagcagaaagagagaagatgttattggcaaaaggatct
caaaaatcatga

>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_3|759_aa
MDSSIHLSSLISRHDDEATRTSTSEGLEEGEVEGETLLIVESEDQASVDLSHDQSGDSLN
SDEGDVSWMEEQLSYFCDKCQKWIPASQLREQLSYLKGDNFFRFTCSDCSADGKEQYERL
KLTWQQVVMLAMYNLSLEGSGRQGYFRWKEDICAFIEKHWTFLLGNRKKTSTWWSTVAGC
LSVGSPMYFRSGAQEFGEPGWWKLVHNKPPTMKPEGEKLSASTLKIKASKPTLDPIITVE
GLRKRASRNPVESAMELKEKRSRTQEAKDIRRAQKEAAGFLDRSTSSTPVKFISRGRRPD
VILEKGEVIDFSSLSSSDRTPLTSPSPSPSLDFSAPGTPASHSATPSLLSEADLIPDVMP
PQALFHDDDEMEGDGVIDPGMEYVPPPAGSVASGPVVGVRKKVRGPEQIKQEVESEEEKP
DRMDIDSEDTDSNTSLQTRAREKRKPQLEKDTKPKEPRYTPVSIYEEKLLLKRLEACPGA
VAMTPEARRLKRKLIVRQAKRDRGLPLFDLDQVVNAALLLVDGIYGAKEGGISRLPAGQA
TYRTTCQDFRILDRYQTSLPSRKGFRHQTTKFLYRLVGSEDMAVDQSIVSPYTSRILKPY
IRSDPHWTPEPDAPLDYCYVRPNHIPTINSMCQEFFWPGIDLSECLQYPDFSVVVLYKKV
IIAFGFMVPDVKYNEAYISFLFVHPEWRRAGIATFMIYHLIQTCMGKDVTLHVSASNPAM
LLYQKFGFKTEEYVLDFYDKYYPLESTECKHAFFLRLRR

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_3|2280_bp
atggatagtagcatccacctgagtagtctgatcagtcggcatgatgacgaagccacgaga
acatcgacctcagaaggactggaggaaggtgaagtggagggagagacgctcctgatcgtc
gaatccgaggatcaggcatcagtggacttatcgcacgaccagagtggggattccctcaac
agtgatgaaggagacgtgtcttggatggaggagcagctgtcctacttctgtgacaagtgc
caaaaatggataccagccagtcagctgagggaacagctcagttaccttaagggtgataat
ttttttaggtttacttgttcggattgctcagcagatggcaaggagcagtatgaaaggctg
aagctgacatggcagcaagtcgtcatgttggcaatgtacaacttgtctctggaaggaagt
ggacgtcaaggttatttcaggtggaaagaagatatctgtgcttttattgagaaacattgg
acttttttactagggaataggaaaaagacgtctacctggtggagcaccgtggcaggttgc
ctcagcgtgggaagtcccatgtacttccgttcaggtgctcaggaatttggagagccagga
tggtggaaacttgttcataacaagcccccaacgatgaaacctgaaggagagaagttgtct
gcctctactttgaaaataaaagcctcaaaaccaactttagatcccatcattactgttgag
ggacttagaaaacgagcaagtcggaatcctgtggaatctgccatggaattaaaagagaaa
aggtctcgaactcaggaagcaaaagacattagaagagcccagaaggaggccgctggcttt
cttgacaggagcacatcttctacccctgtaaaattcataagccgaggccgcaggccagat
gtgattctggaaaaaggcgaagtgattgacttttcctccttgagctcctctgaccgcacc
ccgctgacaagcccatctccttctccttctctggatttctctgcccctggtacacctgcc
tctcattctgccacacctagcttgctttcagaagcagatctgattccagatgtgatgccc
ccacaagccttgtttcatgatgacgatgagatggaaggcgatggagtcatagacccaggg
atggagtacgtcccaccccctgctgggtcagtagcttctgggccagtggttggggtcaga
aagaaggtcagaggccctgaacagataaagcaggaggtagagagtgaggaggaaaaaccc
gacaggatggatattgacagtgaagacacagattcaaacacatctttgcaaacaagggct
agagaaaagaggaagcctcagctggagaaggacacaaagccgaaagagcccaggtatact
cccgtgagcatctacgaggaaaagctgctgctcaagaggctggaagcttgtcccggtgct
gttgccatgactccggaagctcggagactgaaacgcaaactgattgtcagacaagcgaaa
agggataggggattaccactttttgacttggatcaagttgttaatgctgctcttttgtta
gttgacgggatttatggagccaaagaaggaggaatttccagacttccagctggacaagcc
acgtacagaaccacctgtcaggacttcagaatccttgaccgataccagacttccttgccg
tccaggaagggatttcgacaccagaccaccaagtttttgtatcgcttggtaggatcagaa
gatatggctgtggaccagagtattgtcagcccttatacctctcggatcttgaaaccttat
atcaggagcgaccctcactggacgccggagcccgacgcacctctcgattactgttatgtg
cggccaaatcacatcccaacgatcaactccatgtgtcaggagtttttttggcctggcatt
gacctgtctgagtgtctgcagtacccagacttcagtgttgttgttctttataaaaaagtc
atcattgcctttggcttcatggttcctgatgtgaaatacaatgaagcttacatttcattt
ctgttcgtccaccctgaatggagaagagcagggattgcaactttcatgatctatcatctg
attcagacctgcatgggcaaggacgtaacccttcacgtctcagcaagcaaccccgctatg
ctactgtaccagaagtttggattcaagactgaagaatatgtattagatttctatgataaa
tattacccattggagagtacagagtgtaaacacgcattctttctgaggctccggcgctga

>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_4|171_aa
MILEFGRFLVDVETAQTACSELSIMPCSRLPCRHLVGHGKLRLQGHPGPDEESFLCFPYD
SNLLTERSTSKTPRWCSSTWPACRQEVMEFMLSWKLMFQLKKRNNLSTLSDDKLQECFPS
PQYKKVICIGAKENGLPLEYKKKLKAVGPNDRTGKVSEEIEDIIKKESRTH

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_4|516_bp
atgatacttgaatttggaaggttcctggtagacgtagaaacggcccagactgcctgttca
gagctaagcatcatgccctgctccagactcccgtgcaggcatctagtgggacacggcaaa
ctcaggctgcaaggacatccgggcccagatgaggagagttttctgtgcttcccctacgac
agcaacctgctgactgagagatccacctccaaaacccctcggtggtgttcttctacatgg
cccgcctgcaggcaagaagtgatggaatttatgttgtcatggaagttaatgtttcaactc
aagaagagaaataacctatcgacattatctgatgacaaattacaagagtgtttcccatcc
ccacagtataaaaaggttatttgcataggtgcaaaagaaaatggtttgccactggagtac
aaaaagaagttaaaagctgtgggaccaaatgaccgtacaggaaaggtctcagaagaaatt
gaagacatcatcaaaaaggaatcacgaactcattag

>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_5|220_aa
MRGVWRERRELEPGLRTVLAGQLEFRVGVGLAGPALGAASRRCRLRAMRGLEPRPMAAEA
PSPIDHPRAEECRRTARDWQAAPPAALVLDPLGEASWAPESAVTYAVKVCSFTPEASEIA
NPPGGANNSRRAPLRAVTLTAKGCSFTPEPARPRTHQKEETTNTSEHQKEQTLDTPPLRT
VALTTRVRGFILKVSETKNPPIPDTMPSPVRRYINMMFPQ

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_5|663_bp
atgaggggagtgtggagggagagacgcgagctggaaccagggctgcgcacggtgctggcg
ggccagctggagttccgggtgggcgtgggcttggcgggccccgcacttggagcagccagt
cggcgctgccggctccgggcaatgaggggcttagaacccaggccaatggctgcggaggcg
cccagtcccatcgaccacccaagggctgaggagtgcaggcgcacggcgcgggactggcag
gcagctccacctgctgccctggtgctggatccactgggtgaagccagctgggctcctgag
tctgctgtaacatacgccgtgaaggtctgcagcttcacccctgaagccagcgagatcgca
aacccaccggggggagcgaacaactccagacgcgcgcccttaagagctgtaacactcact
gcgaagggctgcagcttcactcctgagccagcgagaccacgaacccaccagaaggaagaa
actacgaacacatccgaacatcagaaggaacaaactctggacacgccgcctttaagaact
gtagcactcaccacgagggtccgcggcttcattcttaaagtcagtgagaccaagaaccca
ccaattccggacacaatgccatcaccagtaagaagatacatcaacatgatgttccctcag
tag

>gi568815578f:18042661_18287456|GENSCAN_predicted_peptide_6|302_aa
MATLPKVIYRCNAIPIKLPMAFFTELENTTLKFIWNQKRAHIAKSILSQKNKAGGIMLPD
FKLYYKATVTKRAWYWYQNRDINQWNRTEPSEIIPHIYNHLIFDKPDKNKKWGKESLFNK
WCWENWLTICRKLKLDPFLTSYTKINSRWIKDLHVRPKTIKTLEENLGNAIQDTGIGKDL
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKGLISRIY
KELKEIYKKQKQPHQKVGEGYEQTLLKRRHLCSQQTHEKMLIITGHQKNANQNHNEIPSH
TS

>gi568815578f:18042661_18287456|GENSCAN_predicted_CDS_6|909_bp
atggccacactgcccaaggtaatttatagatgcaatgccatccccatcaagctaccaatg
gctttcttcacggaattggaaaacactactttaaagttcatatggaaccaaaaaagagcc
cacattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaagagcatggtactggtaccaaaacaga
gatataaaccaatggaacagaacagagccctcagaaataataccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggagtccctatttaataaa
tggtgctgggaaaactggctaaccatatgtagaaagctgaaactggatcccttccttaca
tcttatacaaaaattaattcaagatggattaaagacttacatgttagaccaaaaaccata
aaaaccctagaagaaaacctaggcaatgccattcaggacacaggcataggcaaggactta
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatttaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaatttttgcaatctactcatctgacaaagggctaatatccagaatctac
aaagaactcaaagaaatttacaagaaacaaaaacaaccccatcaaaaagtgggtgaagga
tatgaacagacacttctcaaaagaagacatttatgcagccaacagacacatgaaaaaatg
ctcatcatcactggccatcagaaaaatgcaaatcaaaaccacaatgagataccatctcac
accagttag