GENSCAN 1.0	Date run:  5-Nov-116	Time: 15:08:04

Sequence gi568815588f:101488337_101709468 : 221132 bp : 44.96% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1956   2076  121  2  1  125   85   -25 0.073   0.97
 1.02 Intr +  27573  27673  101  1  2   78   73    28 0.198   0.13
 1.03 Intr +  33303  33534  232  2  1   80   91    92 0.692   6.05
 1.04 Intr +  37677  37816  140  1  2   43   37   142 0.563   4.78
 1.05 Intr +  43959  44096  138  2  0  125  100    33 0.952   8.86
 1.06 Intr +  44616  44734  119  2  2   48   75    90 0.894   2.96
 1.07 Intr +  46325  46574  250  2  1   66   85   176 0.679  12.54
 1.08 Intr +  47018  47136  119  1  2  116   99    15 0.945   4.66
 1.09 Intr +  48207  48317  111  0  0  110   92   124 0.991  14.49
 1.10 Intr +  49957  50035   79  1  1   99   83    26 0.882   2.75
 1.11 Term +  62363  62524  162  1  0   82   36   139 0.751   6.04
 1.12 PlyA +  62830  62835    6                               1.05

 2.00 Prom +  73824  73863   40                              -7.46
 2.01 Sngl +  78147  78461  315  2  0   40   47   256 0.820  10.65
 2.02 PlyA +  83509  83514    6                               1.05

 3.11 PlyA -  87977  87972    6                              -0.45
 3.10 Term -  91481  91117  365  0  2   56   46   429 0.411  30.23
 3.09 Intr -  92080  91912  169  1  1  125   70   130 0.993  14.42
 3.08 Intr -  94555  94427  129  1  0   91   72   199 0.933  19.49
 3.07 Intr -  95345  95172  174  2  0  113   42   192 0.995  17.24
 3.06 Intr -  96583  96266  318  1  0   54   80   339 0.974  25.85
 3.05 Intr -  97031  96980   52  1  1  125   71     9 0.525   1.81
 3.04 Intr -  97820  97526  295  0  1   54   52   244 0.955  13.47
 3.03 Intr -  99046  98910  137  0  2   37  105    78 0.542   4.61
 3.02 Intr -  99982  99868  115  2  1   49  119     9 0.705  -0.39
 3.01 Init - 100192 100012  181  1  1   34  -50   273 0.465   5.45
 3.00 Prom - 100390 100351   40                              -9.06

 4.00 Prom + 101025 101064   40                              -3.06
 4.01 Init + 106363 106402   40  0  1   64  111   108 0.965  11.05
 4.02 Intr + 112402 112526  125  2  2   96   63   103 0.645   8.90
 4.03 Intr + 112834 113000  167  0  2   76   81   212 0.345  18.06
 4.04 Intr + 119579 119695  117  2  0    7   82    95 0.203   0.38
 4.05 Intr + 120499 120601  103  1  1  107   47   149 0.994  12.88
 4.06 Term + 121031 121135  105  1  0   70   33   157 0.997   6.81
 4.07 PlyA + 121937 121942    6                              -0.45

 5.14 PlyA - 122350 122345    6                               1.05
 5.13 Term - 123074 122955  120  2  0  104   47    94 0.997   5.37
 5.12 Intr - 123433 123292  142  0  1  125  113   249 0.998  31.46
 5.11 Intr - 124141 124001  141  0  0   94  117   159 0.993  18.87
 5.10 Intr - 136474 136409   66  0  0  103  110     2 0.000   1.92
 5.09 Intr - 142651 142530  122  1  2   78   81    53 0.004   2.89
 5.08 Intr - 150569 150461  109  1  1   46   88    72 0.018   3.29
 5.07 Intr - 154569 154400  170  0  2   54   52    79 0.009  -0.36
 5.06 Intr - 156688 156549  140  2  2    2   65   135 0.115   2.78
 5.05 Intr - 167329 167264   66  2  0   87   89    32 0.024   2.08
 5.04 Intr - 179757 179550  208  0  1  101  110     7 0.326   2.85
 5.03 Intr - 184711 184579  133  0  1   93  100   131 0.960  15.45
 5.02 Intr - 185337 185152  186  2  0   88  110   102 0.816  11.20
 5.01 Init - 206847 206045  803  0  2   94   69   631 0.147  53.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 140563 140657   95  2  2   66   42   123 0.882   3.49
S.002 Sngl - 206847 206041  807  0  0   94   47   641 0.848  54.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:101488337_101709468|GENSCAN_predicted_peptide_1|523_aa
FYTTQKFEEEREYIKMYSAPVFRHYIVLAMCYLFGFSCEPGVGVTLRVTSDLKRDTKGAS
ESRDDLFLDLGVGYTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVE
HLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKE
WYRVTSDGMLWKKLIERMTIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRD
NTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHH
CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA
SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL
EGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ
FDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYISR

>gi568815588f:101488337_101709468|GENSCAN_predicted_CDS_1|1572_bp
ttttatactactcagaagtttgaggaggagagagaatacattaaaatgtattcagcccca
gtgttcaggcactatatagtgctagctatgtgttacttatttggattctcatgtgaacct
ggtgtaggagtcactctcagggtgactagtgacctgaaaagggacacaaagggggctagt
gagtctcgtgatgatctgtttcttgatctgggtgttggttatacaaaacttgccaatggc
acttccagtatgattgtgcccaagcaacggaaactctcagcaagctatgaaaaggaaaag
gaactgtgtgtcaaatactttgagcagtggtcagagtcagatcaagtggaatttgtggaa
catcttatatcccaaatgtgtcattaccaacatgggcacataaactcgtatcttaaacct
atgttgcagagagatttcataactgctctgccagctcggggattggatcatattgctgag
aacattctgtcatacctggatgccaaatcactatgtgctgctgaacttgtgtgcaaggaa
tggtaccgagtgacctctgatggcatgctgtggaagaagcttatcgagagaatgacaata
gaatctaattggagatgtggaagacatagtttacagagaattcactgccgaagtgaaaca
agcaaaggagtttactgtttacagtatgatgatcagaaaatagtaagcggccttcgagac
aacacaatcaagatctgggataaaaacacattggaatgcaagcgaattctcacaggccat
acaggttcagtcctctgtctccagtatgatgagagagtgatcataacaggatcatcggat
tccacggtcagagtgtgggatgtaaatacaggtgaaatgctaaacacgttgattcaccat
tgtgaagcagttctgcacttgcgtttcaataatggcatgatggtgacctgctccaaagat
cgttccattgctgtatgggatatggcctccccaactgacattaccctccggagggtgctg
gtcggacaccgagctgctgtcaatgttgtagactttgatgacaagtacattgtttctgca
tctggggatagaactataaaggtatggaacacaagtacttgtgaatttgtaaggacctta
aatggacacaaacgaggcattgcctgtttgcagtacagggacaggctggtagtgagtggc
tcatctgacaacactatcagattatgggacatagaatgtggtgcatgtttacgagtgtta
gaaggccatgaggaattggtgcgttgtattcgatttgataacaagaggatagtcagtggg
gcctatgatggaaaaattaaagtgtgggatcttgtggctgctttggacccccgtgctcct
gcagggacactctgtctacggacccttgtggagcattccggaagagtttttcgactacag
tttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgggacttc
ctaaatgatccagctgcccaagctgaacccccccgttccccttctcgaacatacacctac
atctccagataa

>gi568815588f:101488337_101709468|GENSCAN_predicted_peptide_2|104_aa
MCMCARLCSCTPPLPLSAALMTLAQRKVMTNARYQRTRPMTNGRAPEQPHYAVITEDGWP
GAPPPPPRAGNGSRSCSARPGREPSRCRRAANHVGAQDAQTEEP

>gi568815588f:101488337_101709468|GENSCAN_predicted_CDS_2|315_bp
atgtgcatgtgtgcgcgcctgtgctcatgcacgccccccctcccgctgtcagccgcgctg
atgacattggcgcagaggaaagtgatgacaaatgcccgttatcagcgaacgaggccgatg
acaaatgggcgggcgcccgagcagccccattacgctgtaataacagaagatggatggcct
ggagcccccccacccccaccccgtgccggtaacgggagccgatcctgctccgcccgcccc
gggagggagcccagccgctgccgccgggccgccaatcacgtcggggcccaagacgcccag
accgaggagccgtga

>gi568815588f:101488337_101709468|GENSCAN_predicted_peptide_3|644_aa
MQDLARLTAETLPALPTQALRPFPEGRTLREKNEGARGDPRVTVLQQRSLLGCPQTLQPA
PRPAAAMATVPEGHFRLTRKLFWPFALLPPFVRSHWLCWPGSSHTSMDPRGILKAFPKRQ
KIHADASSKVLAKIPRREEGEEAEEWLSSLRAHVVRTGIGRARAELFEKQIVQHGGQLCP
AQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQERRLVDVAGFSIFI
PSRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSP
APAVLDKWVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHK
PVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQM
WYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLL
CVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQ
KYLGVCRLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHA
LSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW

>gi568815588f:101488337_101709468|GENSCAN_predicted_CDS_3|1935_bp
atgcaggacctggcccggctgaccgccgagacccttccagctctgccgacccaggccctg
aggcccttcccggagggccggaccctgagggaaaaaaacgaaggagcccgtggggaccct
cgagttaccgtcctgcagcagcgcagtcttctgggctgtccgcagactctccaaccagcc
ccacgcccagccgctgccatggcaaccgttccagagggtcacttccggctgactcggaag
ctattctggccatttgccctccttccccccttcgtccgctctcattggctctgctggccg
ggatccagccatacttcaatggatcccaggggtatcttgaaggcatttcccaagcggcag
aaaattcatgctgatgcatcatcaaaagtacttgcaaagattcctaggagggaagaggga
gaagaagcagaagagtggctgagctcccttcgggcccatgttgtgcgcactggcattgga
cgagcccgggcagaactctttgagaagcagattgttcagcatggcggccagctatgccct
gcccagggcccaggtgtcactcacattgtggtggatgaaggcatggactatgagcgagcc
ctccgccttctcagactaccccagctgcccccgggtgctcagctggtgaagtcagcctgg
ctgagcttgtgccttcaggagaggaggctggtggatgtagctggattcagcatcttcatc
cccagtaggcctgtgtctcctccccaaaaggcaaaagaggcaccaaacacccaagcccag
cccatctctgatgatgaagccagtgatggggaagaaacccaggttagtgcagctgatctg
gaagccctcatcagtggccactaccccacctcccttgagggagattgtgagcctagccca
gcccctgctgtcctggataagtgggtctgtgcacagccctcaagccagaaggcgaccaat
cacaacctccatatcacagagaagctggaagttctggccaaagcctacagtgttcaggga
gacaagtggagggccctgggctatgccaaggccatcaatgccctcaagagcttccataag
cctgtcacctcgtaccaggaggcctgcagtatccctgggattgggaagcggatggctgag
aaaatcatagagatcctggagagcgggcatttgcggaagctggaccatatcagtgagagc
gtgcctgtcttggagctcttctccaacatctggggagctgggaccaagactgcccagatg
tggtaccaacagggcttccgaagtctggaagacatccgcagccaggcctccctgacaacc
cagcaggccatcggcctgaagcattacagtgacttcctggaacgtatgcccagggaggag
gctacagagattgagcagacagtccagaaagcagcccaggcctttaactctgggctgctg
tgtgtggcatgtggttcataccgacggggaaaggcgacctgtggtgatgtcgacgtgctc
atcactcacccagatggccggtcccaccggggtatcttcagccgcctccttgacagtctt
cggcaggaagggttcctcacagatgacttggtgagccaagaggagaatggtcagcaacag
aagtacttgggggtgtgccggctcccagggccagggcggcggcaccggcgcctggacatc
atcgtggtgccctatagcgagtttgcctgtgccctgctctacttcaccggctctgcacac
ttcaaccgctccatgcgagccctggccaaaaccaagggcatgagtctgtcagaacatgcc
ctcagcactgctgtggtccggaacacccatggctgcaaggtggggcctggccgagtgctg
cccactcccactgagaaggatgtcttcaggctcttaggcctcccctaccgagaacctgct
gagcgggactggtga

>gi568815588f:101488337_101709468|GENSCAN_predicted_peptide_4|218_aa
MAEEYDEKTSELLVRKWRVKSALGAMGQWQLEVGDPAPLGAGNLGPELIKESNANEQSSS
WICLLQPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVDQKERCIIVRTTNKNKDQTKDKES
YSNLDSHPYRQLAVKQGKIFHLSEPEFPFRYYKKFSIPDLDRHQLPLDDALLSFAHANCT
LIISYQKPKEVVVAESELQKELKKVKTAHSNDGDCKTQ

>gi568815588f:101488337_101709468|GENSCAN_predicted_CDS_4|657_bp
atggctgaagaatatgacgagaagacgagtgaactacttgtgagaaagtggcgtgtgaaa
agtgccctgggagccatgggccagtggcagcttgaagtaggagacccagcgcccctagga
gcagggaacctggggcctgaactcatcaaggaaagcaatgccaatgaacagtcctcgagt
tggatttgccttctgcagcctatcttcatgcgcaaggacaccaagatgagtttccagtgg
cggattcgaaacctcccctatcctaaggatgtctatagtgtctctgtggaccagaaggag
cgctgcatcattgtcagaacaaccaacaagaataaggatcagaccaaggacaaggaatct
tactctaatcttgactcccatccctaccgacaactggccgtgaaacaaggcaagatattt
catctctctgagcccgagttcccttttaggtactacaagaagttctccattcctgatcta
gatagacaccagctacctctggatgacgccttgctgagctttgcccacgccaactgcacc
ctgatcatctcttaccagaagccaaaggaggttgtggtggccgagtctgagctacagaag
gaactaaagaaggtgaagacagcccacagcaacgatggggactgcaagacccagtag

>gi568815588f:101488337_101709468|GENSCAN_predicted_peptide_5|801_aa
MVSPPPGAAAVAARAGLRVGPAPRPLMGSQGRSGPPGNGGPGEGEGGEARKLQEGRVARG
KRRKGKGKGKARAGQGGRGSGAEGKPGPQTAKEAAGPGADAGARACPREEAEGGRSVEEG
ARGIVKGVEGSAGAGKEAQGREYGKKEEWRVRARRREGARPGRAQGRGGQAWADIAGTGV
AMAAAAGEEEEEEEAARESAARPAAGPALWRLPEELLLLICSYLDMRALGRLAQVCRWLR
RFTSCDLLWRRIARASLNSGFTRLGTDLQMPWMQLEDDSLYISQANFILAYQFRPDGASL
NRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKYSAHEQEVNCVDCK
GGIIVSGSRDRTAKGIKDSPFLHLQQSPLPEHLSSPLIPGNANESISSPVSRCGLWPQAG
WGSAYTPSRLKTESGPLLSAHYSAAALAVLEKPGSFLLCLNEKRTNLNAEQTGKKCDLTT
TYKPCAKLLLQPMAMIAPEYSSPRLSETPLYVITGSVGITPSPALNLGTLKEGLVALMVG
MALIQALPWPQCSPVAHDVFGLYSNVPKRVVMKQKFGGKHCQSCRKTGILIGSCSQAFTT
QKAIEMPLWMVGSTSMALSTHHRCDSSSFWSCALEGIQVDVSPPASSFVTGTACCGHFSP
LRIWDLNSGQLMTHLGSDFPPGAGVLDVMYESPFTLLSCGYDTYVRYWDLRTSVRKCVME
WEEPHDSTLYCLQTDGNHLLATGSSYYGVVRLWDRRQRACLHAFPLTSTPLSSPVYCLRL
TTKHLYAALSYNLHVLDFQNP

>gi568815588f:101488337_101709468|GENSCAN_predicted_CDS_5|2406_bp
atggtgtcgcctcctcccggggcggcggcggtggcggctcgggctgggctccgcgtcggg
ccggccccgcggccgctcatgggcagccagggccgctcggggccccccgggaacggcggg
cccggcgagggcgagggcggagaggcgaggaagctgcaggaagggagggtggcgaggggg
aagcgaaggaaggggaaggggaagggaaaagcgagagcggggcaaggcggaagaggaagc
ggggcggaagggaagcccgggccgcagacggcgaaggaggcagccgggccgggggctgac
gcgggagcgagggcatgcccaagggaggaagcagagggaggcagaagcgtggaggaaggg
gcgagaggcatcgtcaagggagtcgaggggagcgcaggggccgggaaggaggcacaagga
agagagtatgggaagaaggaggaatggagggtcagggctaggcggcgggagggcgccagg
ccgggaagagcacagggacgagggggtcaggcttgggccgacatcgcggggacaggggtg
gccatggcggcggcggccggggaggaggaggaggaggaggaggcggctcgggagtcggct
gcccgcccggccgcggggcctgcgctctggcgcctgccggaggagctgctgctgctcatc
tgctcctacctggacatgcgggccctcggccgcctggcccaggtgtgccgctggctgcgg
cgcttcaccagctgcgatctgctctggcgccggatagcccgggcctcgctcaactccggc
ttcacgcggctcggcaccgaccttcagatgccctggatgcagctagaggatgattctctg
tacatatcccaggctaatttcatcctggcctaccagttccgtccagatggtgccagcttg
aatcgtcggcctctgggagtctttgctgggcatgatgaggacgtttgccactttgtgctg
gccaactcgcatattgttagtgcaggaggggatgggaagattggcattcataagattcac
agcaccttcactgtcaagtactcggctcatgaacaggaggtgaactgtgtggattgcaaa
gggggcatcattgtgagtggctccagggacaggacggccaagggcataaaggattcccca
tttctccacctccaacagtcacctctcccggagcacctctcctccccactgatcccaggc
aatgccaacgagagcatctcctctcctgtttctaggtgtggcctttggcctcaggccggc
tggggcagtgcttacacaccatccagactgaagaccgagtctggtccattgctatcagcc
cattactcagctgcagctttagctgtcctagagaaacctgggtctttcctcctgtgcctg
aatgagaagagaacaaatctcaatgccgagcaaacaggcaaaaagtgtgacctgaccacc
acctacaaaccatgtgccaaactgctcctacagcccatggccatgattgcccctgaatat
agctcacctaggctgtcagagactcctctgtatgtgatcacaggtagtgtaggcatcacg
cccagccctgccctaaatcttggcactttaaaggagggcctggtggcgctgatggtgggc
atggcattgattcaggcactgccctggccccagtgctcccctgtggctcatgatgtgttt
ggcctttattccaatgttccaaagagagtggttatgaagcagaagtttgggggaaagcac
tgtcagagctgccggaaaactggaattctcataggcagctgttcccaggctttcaccact
cagaaagccatcgagatgccactgtggatggtaggttccacaagcatggccctgtccact
catcacagatgtgactcgagcagcttctggagctgcgctctagagggcattcaggtggat
gtttccccacctgcaagctcttttgtgacagggacggcttgttgcgggcacttctcaccc
ctgagaatctgggacctcaacagtgggcagctgatgacacacttgggcagtgactttccc
ccaggggctggggtgctggatgtcatgtatgagtcccctttcacactgctgtcctgtggc
tatgacacctatgttcgctactgggacctccgcaccagcgtccggaaatgtgtcatggag
tgggaggagccccacgacagcaccctgtactgcctgcagacagatggcaaccacctgctg
gccacaggttcctcctactacggtgttgtacggctgtgggaccggcgtcaaagggcctgc
ctgcacgccttcccgctgacgtcgactcccctcagcagccctgtgtactgcctgcgtctc
accaccaagcatctctatgctgccctgtcttacaacctccacgtcctggattttcaaaac
ccatga