GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:56:05

Sequence gi568815596f:173258711_173467286 : 208576 bp : 42.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +     16    105   90  0  0   68   97    61 0.566   5.54
 1.02 Intr +   2353   2427   75  0  0   88   99    36 0.911   3.49
 1.03 Intr +   5035   5185  151  0  1   75  108    75 0.995   7.01
 1.04 Term +   7340   8040  701  0  2  121   45   514 0.999  43.11
 1.05 PlyA +   8787   8792    6                               1.05

 2.00 Prom +  11408  11447   40                              -8.95
 2.01 Init +  12810  12994  185  2  2   73   72   105 0.547   6.04
 2.02 Intr +  14271  14512  242  0  2   67   49   174 0.724   7.67
 2.03 Intr +  23797  24006  210  2  0   39   36   132 0.007   1.06
 2.04 Intr +  38885  39126  242  0  2   41   13   257 0.031   9.85
 2.05 Term +  39233  39706  474  1  0   92   41   309 0.966  20.50
 2.06 PlyA +  39822  39827    6                               1.05

 3.03 PlyA -  40928  40923    6                              -0.45
 3.02 Term -  41588  41533   56  0  2   63   54    69 0.394  -2.26
 3.01 Init -  42510  42285  226  0  1   94  109   136 0.632  14.98
 3.00 Prom -  45930  45891   40                              -4.55

 4.03 PlyA -  46224  46219    6                               1.05
 4.02 Term -  47660  47429  232  1  1   79   39   139 0.176   3.06
 4.01 Init -  50305  50298    8  1  2   54  131     0 0.197   1.40
 4.00 Prom -  52162  52123   40                              -1.95

 5.00 Prom +  69076  69115   40                              -0.45
 5.01 Init +  96254  96274   21  1  0   94   93    70 0.524   5.92
 5.02 Intr + 100002 100127  126  2  0   57  127    81 0.864   8.86
 5.03 Intr + 100545 100781  237  2  0   68  101   203 0.990  16.49
 5.04 Intr + 104516 104752  237  1  0   18   78   174 0.967   6.29
 5.05 Intr + 105108 105185   78  2  0   89   89    27 0.744   1.73
 5.06 Intr + 106085 106279  195  1  0   26   82   194 0.824  11.29
 5.07 Intr + 106742 106882  141  1  0   68   85   114 0.745   8.73
 5.08 Intr + 107573 107722  150  1  0   62   94   123 0.951   9.74
 5.09 Intr + 108440 108576  137  1  2   67   67    84 0.557   2.65
 5.10 Intr + 122156 122214   59  2  2   69  107     5 0.039  -1.89
 5.11 Intr + 127872 127994  123  1  0   46  105    61 0.161   3.24
 5.12 Term + 128574 128716  143  1  2   80   40   102 0.388   1.71
 5.13 PlyA + 131835 131840    6                               1.05

 6.03 PlyA - 132224 132219    6                               1.05
 6.02 Term - 135781 135548  234  1  0   64   45   226 0.703  11.24
 6.01 Init - 136578 136453  126  0  0   59   53   163 0.954  10.11
 6.00 Prom - 140363 140324   40                              -8.15

 7.09 PlyA - 140447 140442    6                               1.05
 7.08 Term - 143994 143795  200  1  2   38   43   312 0.756  18.28
 7.07 Intr - 144363 144241  123  1  0   65   63    99 0.399   4.74
 7.06 Intr - 155078 154947  132  0  0   46   41   108 0.126   1.60
 7.05 Intr - 164246 164024  223  2  1   19   98    54 0.010  -3.72
 7.04 Intr - 164478 164289  190  2  1    6   78   178 0.033   7.27
 7.03 Intr - 167709 167657   53  0  2  131   53    12 0.038  -1.21
 7.02 Intr - 170677 170529  149  2  2   32   96    93 0.012   3.53
 7.01 Init - 173102 172904  199  2  1   92   50   143 0.010  10.01
 7.00 Prom - 178334 178295   40                              -5.45

 8.00 Prom + 187613 187652   40                              -5.95
 8.01 Init + 192484 192620  137  0  2   67   75   159 0.717  12.16
 8.02 Intr + 194531 194681  151  2  1  -36   45   168 0.238  -0.66
 8.03 Intr + 196147 196273  127  0  1   64   72    40 0.133  -0.67
 8.04 Term + 200748 200863  116  1  2   69   32   133 0.626   3.55
 8.05 PlyA + 201852 201857    6                               1.05

 9.02 PlyA - 202137 202132    6                               1.05
 9.01 Term - 206111 205990  122  0  2   83   48   127 0.922   5.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_1|338_aa
MDGDEIAITYIKDVTFNTNLPDAEILKMTKPPFVMEKWIVGIAKSQTVECTVTYESDVRT
PKSTKHVHSIQWSRTKPQDEVKAVQLAIQTLFTNSDGNPGSRSDSSADCQWLDTLRMRQI
ASNTSLQRSQSNPILGSPFFSHFDGQDSYAAAVRRPQVPIKYQQITPVNQSRSSSPTQYG
LTKNFSSLHLNSRDSGFSSGNTDTSSERGRYSDRSRNKYGRGSISLNSSPRGRYSGKSQH
STPSRGRYPGKFYRVSQSALNPHQSPDFKRSPRDLHQPNTIPGMPLHPETDSRASEEDSK
VSEGGWTKVEYRKKPHRPSPAKTNKERARGDHRGWRNF

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_1|1017_bp
atggatggggatgaaattgcaataacctacataaaagatgtgacattcaacactaaccta
cctgatgcggagattttaaagatgacaaagccaccatttgtaatggagaagtggattgta
ggaatagcaaaaagtcagactgtggagtgcactgtcacatatgagagtgatgttagaact
ccaaaaagcactaaacatgtccattcgattcagtggagtagaacaaaacctcaggatgaa
gtgaaagcagtccaacttgccattcagacattattcaccaattcagatggcaaccctgga
agcaggtccgactcaagtgctgattgccagtggttagatactctgaggatgcggcagatt
gcatccaacacttctttacagcgttcccagagcaatcctattctggggtcaccgttcttc
tcacactttgatggccaggattcctacgctgctgctgtgagacggccccaggtgcccatt
aagtatcaacagattacacctgtgaaccagtccagaagctcgtctcctactcagtatgga
ctgaccaaaaacttctcttccctacatctcaactctagggacagtggcttttccagtggc
aatactgacacctcttcagagaggggtcgatactcagacagaagcaggaacaaatatgga
cgtggtagtatatcactcaattcttctcctagaggaagatacagtggaaagagtcagcat
tccactccttcaagaggaagataccctggaaagttctacagggtttctcagtcagcactc
aatcctcaccagtcgcctgacttcaagagaagccccagggacctccaccaacccaacacc
ataccagggatgcctttgcaccctgagactgactcaagagccagtgaagaggacagcaaa
gtcagcgaagggggctggacaaaagtggaataccggaaaaagccccacaggccatctccc
gccaaaaccaataaagagagagccagaggggaccaccgtggatggagaaacttttga

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_2|450_aa
METCCRYQAIQREHGSFRGCGELEQPKLVVNGSLEERNPQRKRLAILGKQDFHAGHDLPN
LSALYSPAVTASKSTQSFTESLTLAVFLSFLLPKDTSTLISCQMMPLLAETGGRFVLVRG
QFKICQLVVADYQDVQTGSFAMYSGVQLASPSGSRTGATGGAAHSPARAPALHSPWAVDG
TRGCGAGGSARLGGSGRVGAHGSREAQAWWAAEKREGTSPRKHQMADDAGAGVGGRRPRG
PRMGNRGGFHRGFGSGIRHQGCGCGQGQGQGRGVRGGKAEYKEWMTVTKLGHLDEVLKIM
LVQKQTHTSQCTRFKAFVATGDYNGHISLGIKCSKEVATAICGAIILAKLSIVPACRGYW
GNKISKPHTIPCKVAGCCGSVLVCLISVPRGTGIVLAPVPKKLLMMTGINDCYTSARGCT
ATLGNFAKATFDAISKTYSYLTPDPGRRLY

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_2|1353_bp
atggaaacgtgctgcaggtaccaagcaatccaaagagagcatgggtctttcagaggctgt
ggtgagttggaacagccaaagctggtcgtcaatggaagcctagaagaacgcaatccacaa
aggaaaaggttagccatactgggcaagcaagactttcatgcagggcacgacctgcccaat
ctcagtgccctctacagtcctgctgtgactgcttctaaaagtacacaaagctttactgaa
agtctgaccctggcagttttcctttcctttctcttacccaaagacaccagcaccctcatt
agttgccagatgatgcctcttctggctgagactggaggacgctttgtgttggtgcgggga
caattcaagatttgtcagctggtagtggctgattatcaagatgtccaaactggctccttt
gctatgtactcaggagtccagctggcttcacctagtggatctcgcacaggggccacaggt
ggagctgcccacagtccggcccgtgcacccgcactccacagcccttgggcagtcgatggg
accaggggctgtggagcagggggcagtgctcgtctgggaggctcgggccgcgtaggagcc
cacggcagcagggaggctcaggcatggtgggctgcagaaaagagagaaggaacttctcca
agaaaacaccaaatggcagatgatgctggtgcaggagtagggggccggaggccccggggg
cctaggatggggaaccgtggtggcttccacagaggctttggtagtggcatccggcaccag
ggttgtggctgtggacagggccagggccaaggccgtggagttcgtggaggcaaggccgag
tataaggagtggatgaccgtcaccaagctgggccacctggacgaggttttgaaaattatg
ctggtgcagaagcagacccataccagccagtgtaccaggttcaaggcatttgttgccact
ggggactacaatggccacatcagtctgggtattaagtgctccaaggaggtggccactgcc
atctgtggggctatcatcctggccaagctctccattgtccctgcgtgcagaggctactgg
gggaacaaaatcagcaagccccacaccatcccttgcaaggtggcaggctgctgtggctct
gtgctggtgtgcctcatttctgtgcccaggggcactggcattgtcttggcccctgtgccc
aagaagctactcatgatgactggtatcaatgactgctacacctcagccaggggctgcact
gccaccctgggcaactttgccaaggccacctttgatgccatctctaagacctacagctac
ctgacccccgaccctggaaggagactgtattaa

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_3|93_aa
MKVHGFIPEVSKTKNPPEGLNSGHNNTSILGAGRWWNGKQLQMNSLASSEETFTNRAESP
LQEFTTLCIFPSSGTGSLIFLVVKQRNAGDTRQ

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_3|282_bp
atgaaggtccacggcttcatccctgaagtcagcaagaccaagaacccaccagaaggacta
aattccggacacaataacaccagcattttaggagctggaagatggtggaatggcaagcaa
cttcagatgaattccctagccagcagtgaggaaacattcactaacagagcagaatccccc
ctgcaggaattcacaacattgtgtatctttccgagtagtggcacaggctccttaattttc
ctggttgtgaaacaaagaaatgcaggtgatacccggcaatga

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_4|79_aa
MHRQKPSEAPTASAFNSTSLCIDLIHQPADYQGFVIILKNFRARANDPSNSLPSDFLNVI
LKILKMAKFLSHLRTAPFA

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_4|240_bp
atgcaccggcaaaagccttctgaagctcccactgcctctgccttcaattccacatccctt
tgcattgatctcattcatcaaccagcagattaccagggatttgtcattatcctcaagaat
tttagagcccgtgcaaatgacccatccaacagcttgccttcagacttccttaatgtgatt
ctaaagattctaaagatggccaaattcctgtcacacctgagaacagctccatttgcctaa

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_5|548_aa
MDARRVPQKDLRVKKNLKKFRYVKLISMETSSSSDDSCDSFASDNFANTKPKFRSDISEE
LANVFYEDSDNESFCGFSESEVQDVLDHCGFLQKPRPDVTNELAGIFHADSDDESFCGFS
ESEIQDGMRLQSVREGCRTRSQCRHSGPLRVAMKFPARSTRGATNKKAESRQPSENSVTD
SNSDSEDESGMNFLEKRALNIKQNKAMLAKLMSELESFPGSFRGRHPLPGSDSQSRRPRR
RTFPGVASRRNPERRARPLTRSRSRILGSLDALPMEEEEEEDKYMLVRKRKTVDGYMNED
DLPRSRRSRSSVTLPHIIRPVEEITEEELENVCSNSREKIYNRSLGSTCHQCRQKTIDTK
TNCRNPDCWGVRGQFCGPCLRNRYGEEVRDALLDPNWHCPPCRGICNCSFCRQRDGRCAT
GVLVYLAKYHGFGNVHAYLKSFHSDCTGVHPQAIKSARLRGKDQCTQTTKANKKKRLEDT
QPGGFLQPSEQDQDYSILFPKDIEPWPADEGLAKPGYSLPPHGQLESGNQPKHPLKPQHS
PSLKSVSQ

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_5|1647_bp
atggacgctcgccgcgtgccgcagaaagatctcagagtaaagaagaacttaaagaaattc
agatatgtgaagttgatttccatggaaacctcgtcatcctctgatgacagttgtgacagc
tttgcttctgataattttgcaaacacgaaacctaaattcaggtcagatatcagtgaagaa
ctggcaaatgttttttatgaggactctgataatgaatctttctgcggcttttcagaaagt
gaggtgcaagatgtattagaccattgtggatttttacagaaaccaaggccagatgtcact
aacgaactggccggtatttttcatgccgactctgacgatgaatcattttgcggtttctca
gagagtgagatacaagatggaatgaggctgcagtcagttcgggaaggctgtaggacccgc
agccagtgcaggcactctggacctctcagggtggcgatgaagtttccagcgcggagtacc
aggggagcaaccaacaaaaaagcagagtcccgccagccctcagagaattctgtgactgat
tccaactccgattcagaagatgaaagtggaatgaattttttggagaaaagggctttaaat
ataaagcaaaacaaagcaatgcttgcaaaactcatgtctgaattagaaagcttccctggc
tcgttccgtggaagacatcccctcccaggctccgactcacaatcaaggagaccgcgaagg
cgtacattcccgggtgttgcttccaggagaaaccctgaacggagagctcgtcctcttacc
aggtcaaggtcccggatcctcgggtcccttgacgctctacccatggaggaggaggaggaa
gaggataagtacatgttggtgagaaagaggaagaccgtggatggctacatgaatgaagat
gacctgcccagaagccgtcgctccagatcatccgtgacccttccgcatataattcgccca
gtggaagaaattacagaggaggagttggagaacgtctgcagcaattctcgagagaagata
tataaccgttcactgggctctacttgtcatcaatgccgtcagaagactattgataccaaa
acaaactgcagaaacccagactgctggggcgttcgaggccagttctgtggcccctgcctt
cgaaaccgttatggtgaagaggtcagggatgctctgctggatccgaactggcattgcccg
ccttgtcgaggaatctgcaactgcagtttctgccggcagcgagatggacggtgtgcgact
ggggtccttgtgtatttagccaaatatcatggctttgggaatgtgcatgcctacttgaaa
agtttccattctgattgtaccggggtacatcctcaggcaattaaatcggccaggttaaga
gggaaggatcagtgtacccagaccacaaaagcaaacaagaaaaaaagacttgaggacaca
caaccagggggattcctgcagccgtcggagcaggatcaagattacagcattcttttcccc
aaagacatagagccatggcctgctgatgagggactagctaaaccaggttacagcctccca
ccccatgggcagctggaatctgggaaccagccgaaacaccctctgaagcctcagcatagc
ccttccctgaaaagtgtctctcaatag

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_6|119_aa
MPDPEPTLNFMEEKDVPKVCSTSRRVFFRMLSVVVLKQLEEREGEKERRASNALSLDQEH
LVRIRNAGFGVNLVLSYIISHKLPATGNLPIDNSPHFPDAEQAREPVGENQEYRARNIQ

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_6|360_bp
atgccagacccagagcccactctgaatttcatggaggagaaagatgtacctaaggtttgc
tccacatcacggcgtgtcttctttcgcatgctctcggtggtcgtgttaaagcaactagag
gaaagggaaggggagaaagaacgtagagcctcaaatgccctaagtttggatcaagagcac
cttgttagaattaggaatgctggatttggtgtgaacttggtgctgagttacatcatcagc
cataagcttccagccactggaaatcttcctatagacaacagtcctcacttcccagatgca
gagcaagccagagaacctgtaggagaaaaccaggaatatagagccagaaacatacaatga

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_7|422_aa
MTTTTTFKGVNPNSRNSSRVLRLLGGGSNFSLGFDEPTEQPVRKNKMSSSIFGTPEENPP
SWATLAENTNKNKNQFLPSWWGQMVKPASTLRITSTMREAEPKRYVGTKEGRRRSQDQPL
MGAASREECGLGQGRGFDSTVSSWDGEKFSVGTESFSRPEGLERKRIREAKGLLVAQKGS
SMAGAKDDLWETVGGNEIREDGIHPVIATNNTGQGHEAPQLSSPVLSHIITTMGQPERRE
LRDSSFVTGLPPSCLPCVIAHTHNPSTLGGQEQAVGEFPEVEGGKEKETGGMSSVYEHVQ
GMGAREGFTSPGKAQGTQSESSRAQQCPELTDGIRKSSSSQPQAVFKIGVVAPPAKATLP
TDLVTNLGDQRTLISKGLDPVKQRSVATDRFPESELPLLESKARRNPVWTYFIPQDRAAL
IE

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_7|1269_bp
atgaccaccaccactaccttcaagggtgttaaccccaacagcaggaatagctcccgggtt
ttgcggctgctgggtggtggatccaatttttcattgggttttgatgaaccaacagaacaa
cctgtgagaaagaacaaaatgtcctctagtatctttgggacacctgaagaaaatccacct
tcttgggccacattggcagagaatacgaataagaataagaaccaatttctaccttcttgg
tggggacaaatggttaaaccagcaagtacactaaggattactagtaccatgagagaagca
gaaccgaagcgctatgtgggaacgaaggaaggaaggaggaggagtcaggaccagccattg
atgggggctgcctccagagaggagtgtggccttggccaaggaagagggtttgacagcact
gtgagctcatgggatggggagaagttttctgttggaactgaaagtttttctaggcctgag
ggcctagagaggaagaggatacgtgaggcgaaaggtctgctcgtggcacagaagggtagc
agcatggctggagccaaggatgatttgtgggagacagttggaggaaatgagatcagagaa
gatggaatacaccctgtaatagctaccaacaatactggacaaggacatgaggctccacag
ctttcatctcctgtgctatctcacattatcacaacaatgggccaaccagagaggagggaa
ttgagggattcgagctttgtaactgggctccctccttcctgtctcccttgtgtgatagct
cacacccataatcccagcactttaggaggccaagagcaggctgtaggagagttccctgag
gtagaaggaggaaaagaaaaggagactgggggaatgagctctgtgtatgagcatgttcag
gggatgggagcaagagaggggtttacatctcctgggaaggcccagggcacccaaagtgag
agcagcagggcgcagcagtgcccagagctgactgatggcatcaggaaatctagctcatcc
caaccacaggcagtttttaaaattggggttgtggctccccctgctaaagcgacattaccc
acggaccttgttaccaaccttggcgaccagagaacgctgatctccaaaggtctagacccg
gtgaaacagcgttcggtggccactgaccggtttccagagtcagagctccccctgctggaa
tccaaagcacgtcgtaaccctgtctggacgtattttattccacaagaccgtgcagccctg
attgagtga

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_8|176_aa
MGVWLAKELAYKVKAAQESQVSPQASCVHSPRKCSLEATDSLCRKREGARAGELGQRVAA
ELPAGGVMGKGGQGDGALIEPVAMAVELTRDKWKEWNLLIKQSIRQIGCCIPLQGCHNKV
PQTGQLQQQRPNCLTVLEALPFSKQGEIQYRSRATVIQWCHITMAIAAQGRNAEQL

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_8|531_bp
atgggggtctggcttgcaaaggagctcgcatataaagtgaaagctgctcaggagagccag
gtctccccacaggcgtcctgtgttcacagtcctcgtaaatgttctctggaggccacagat
tcattatgtcggaaaagggagggagccagggctggggagctggggcagcgtgtggcagca
gaacttcctgctgggggtgtgatggggaaagggggccaaggagatggggctctaattgag
ccagttgcaatggcggtggagctcaccagggataagtggaaagaatggaaccttctgatt
aaacaatctattagacaaataggctgctgtattcctctgcaaggctgccataacaaagta
ccacaaactgggcagcttcaacagcagagacctaattgtctcacggttctggaagcattg
cccttttcaaaacaaggggagattcagtatcgttcccgtgccacagtgatccagtggtgt
cacatcactatggcaattgctgcccagggcaggaatgcagagcagctgtaa

>gi568815596f:173258711_173467286|GENSCAN_predicted_peptide_9|40_aa
XPKNRLLPNGINRCEKTAGDNAVLLSLSQCRRESSNRIFN

>gi568815596f:173258711_173467286|GENSCAN_predicted_CDS_9|123_bp
nggccaaaaaaccgcctcctacctaacggcataaataggtgtgagaaaactgcaggggac
aacgctgttctgttatccctgtcacagtgccgcagggaaagcagcaaccggatctttaat
tga