Result of FASTA (omim) for pF1KB7959
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7959, 264 aa
  1>>>pF1KB7959 264 - 264 aa - 264 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5809+/-0.000299; mu= 9.9406+/- 0.019
 mean_var=104.3715+/-20.944, 0's: 0 Z-trim(120.4): 99  B-trim: 0 in 0/55
 Lambda= 0.125540
 statistics sampled from 35521 (35623) to 35521 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.418), width:  16
 Scan time:  6.940

The best scores are:                                      opt bits E(85289)
NP_945320 (OMIM: 600188) amino-terminal enhancer o ( 264) 1767 329.8 3.2e-90
XP_006722727 (OMIM: 600188) PREDICTED: amino-termi ( 263) 1748 326.3 3.5e-89
NP_001121 (OMIM: 600188) amino-terminal enhancer o ( 197) 1235 233.3 2.5e-61
NP_945321 (OMIM: 600188) amino-terminal enhancer o ( 196) 1216 229.9 2.7e-60
NP_001269682 (OMIM: 605132) transducin-like enhanc ( 704)  854 164.7 4.3e-40
XP_016870572 (OMIM: 605132) PREDICTED: transducin- ( 722)  854 164.7 4.4e-40
NP_008936 (OMIM: 605132) transducin-like enhancer  ( 773)  854 164.7 4.7e-40
XP_011517268 (OMIM: 605132) PREDICTED: transducin- ( 798)  854 164.7 4.8e-40
NP_001269677 (OMIM: 605132) transducin-like enhanc ( 805)  854 164.7 4.8e-40
XP_011517262 (OMIM: 605132) PREDICTED: transducin- ( 830)  854 164.7 4.9e-40
XP_016870562 (OMIM: 605132) PREDICTED: transducin- ( 771)  853 164.5 5.3e-40
XP_016870570 (OMIM: 605132) PREDICTED: transducin- ( 748)  846 163.2 1.2e-39
XP_005252234 (OMIM: 605132) PREDICTED: transducin- ( 774)  846 163.2 1.3e-39
XP_011517267 (OMIM: 605132) PREDICTED: transducin- ( 799)  846 163.2 1.3e-39
XP_011517261 (OMIM: 605132) PREDICTED: transducin- ( 831)  846 163.2 1.3e-39
XP_016870561 (OMIM: 605132) PREDICTED: transducin- ( 772)  845 163.0 1.4e-39
XP_016870556 (OMIM: 605132) PREDICTED: transducin- ( 829)  845 163.1 1.5e-39
XP_006717326 (OMIM: 600189) PREDICTED: transducin- ( 768)  787 152.5 2.1e-36
XP_011517253 (OMIM: 600189) PREDICTED: transducin- ( 769)  787 152.5 2.1e-36
XP_005252211 (OMIM: 600189) PREDICTED: transducin- ( 803)  787 152.6 2.2e-36
NP_001290033 (OMIM: 600189) transducin-like enhanc ( 755)  779 151.1 5.6e-36
XP_006720728 (OMIM: 600190) PREDICTED: transducin- ( 763)  779 151.1 5.7e-36
XP_006717325 (OMIM: 600189) PREDICTED: transducin- ( 769)  779 151.1 5.7e-36
NP_005068 (OMIM: 600189) transducin-like enhancer  ( 770)  779 151.1 5.7e-36
XP_011520282 (OMIM: 600190) PREDICTED: transducin- ( 771)  779 151.1 5.7e-36
XP_005252210 (OMIM: 600189) PREDICTED: transducin- ( 804)  779 151.1 5.9e-36
XP_005254690 (OMIM: 600190) PREDICTED: transducin- ( 755)  771 149.6 1.5e-35
NP_065959 (OMIM: 600190) transducin-like enhancer  ( 760)  771 149.6 1.5e-35
NP_001269908 (OMIM: 600190) transducin-like enhanc ( 764)  771 149.6 1.5e-35
NP_001269909 (OMIM: 600190) transducin-like enhanc ( 767)  771 149.6 1.5e-35
NP_001098662 (OMIM: 600190) transducin-like enhanc ( 769)  771 149.6 1.6e-35
NP_005069 (OMIM: 600190) transducin-like enhancer  ( 772)  771 149.6 1.6e-35
NP_001269910 (OMIM: 600190) transducin-like enhanc ( 762)  760 147.6 6.1e-35
XP_006722927 (OMIM: 601041) PREDICTED: transducin- ( 693)  692 135.3 2.9e-31
NP_001138233 (OMIM: 601041) transducin-like enhanc ( 706)  692 135.3 2.9e-31
XP_011526532 (OMIM: 601041) PREDICTED: transducin- ( 732)  692 135.3   3e-31
NP_001287775 (OMIM: 601041) transducin-like enhanc ( 744)  692 135.3 3.1e-31
NP_003251 (OMIM: 601041) transducin-like enhancer  ( 743)  682 133.5 1.1e-30
XP_011517258 (OMIM: 605132) PREDICTED: transducin- ( 844)  634 124.9 4.9e-28
XP_016870560 (OMIM: 605132) PREDICTED: transducin- ( 786)  633 124.7 5.3e-28
XP_011517259 (OMIM: 605132) PREDICTED: transducin- ( 843)  633 124.7 5.6e-28
XP_011517272 (OMIM: 605132) PREDICTED: transducin- ( 650)  619 122.1 2.6e-27
XP_016870563 (OMIM: 605132) PREDICTED: transducin- ( 764)  619 122.1   3e-27
XP_011517271 (OMIM: 605132) PREDICTED: transducin- ( 771)  619 122.1   3e-27
XP_011517269 (OMIM: 605132) PREDICTED: transducin- ( 789)  619 122.1 3.1e-27
XP_006717331 (OMIM: 605132) PREDICTED: transducin- ( 815)  619 122.1 3.2e-27
XP_011517260 (OMIM: 605132) PREDICTED: transducin- ( 840)  619 122.1 3.2e-27
XP_006717327 (OMIM: 605132) PREDICTED: transducin- ( 847)  619 122.1 3.3e-27
XP_011517254 (OMIM: 605132) PREDICTED: transducin- ( 872)  619 122.1 3.3e-27
XP_011517255 (OMIM: 605132) PREDICTED: transducin- ( 870)  618 122.0 3.8e-27


>>NP_945320 (OMIM: 600188) amino-terminal enhancer of sp  (264 aa)
 initn: 1767 init1: 1767 opt: 1767  Z-score: 1740.8  bits: 329.8 E(85289): 3.2e-90
Smith-Waterman score: 1767; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264)

               10        20        30        40        50        60
pF1KB7 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
              190       200       210       220       230       240

              250       260    
pF1KB7 HLSKEDKNGHDGDTHQEDDGEKSD
       ::::::::::::::::::::::::
NP_945 HLSKEDKNGHDGDTHQEDDGEKSD
              250       260    

>>XP_006722727 (OMIM: 600188) PREDICTED: amino-terminal   (263 aa)
 initn: 1294 init1: 1294 opt: 1748  Z-score: 1722.2  bits: 326.3 E(85289): 3.5e-89
Smith-Waterman score: 1748; 99.6% identity (99.6% similar) in 264 aa overlap (1-264:1-263)

               10        20        30        40        50        60
pF1KB7 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MCHKNGFPQEGGITAAFLQKRKLRLSKNHRPARAKVTEHVRGTRPGRATAGPAASTRAAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKLECDKLASE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQVLGAIERAKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 VTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
       :::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VTAPELNSIIRQ-LQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGLLSLSALGSQA
              190        200       210       220       230         

              250       260    
pF1KB7 HLSKEDKNGHDGDTHQEDDGEKSD
       ::::::::::::::::::::::::
XP_006 HLSKEDKNGHDGDTHQEDDGEKSD
     240       250       260   

>>NP_001121 (OMIM: 600188) amino-terminal enhancer of sp  (197 aa)
 initn: 1235 init1: 1235 opt: 1235  Z-score: 1221.9  bits: 233.3 E(85289): 2.5e-61
Smith-Waterman score: 1235; 100.0% identity (100.0% similar) in 188 aa overlap (77-264:10-197)

         50        60        70        80        90       100      
pF1KB7 RATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
                                     ::::::::::::::::::::::::::::::
NP_001                      MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
                                    10        20        30         

        110       120       130       140       150       160      
pF1KB7 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
      40        50        60        70        80        90         

        170       180       190       200       210       220      
pF1KB7 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
     100       110       120       130       140       150         

        230       240       250       260    
pF1KB7 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
       ::::::::::::::::::::::::::::::::::::::
NP_001 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
     160       170       180       190       

>>NP_945321 (OMIM: 600188) amino-terminal enhancer of sp  (196 aa)
 initn: 762 init1: 762 opt: 1216  Z-score: 1203.3  bits: 229.9 E(85289): 2.7e-60
Smith-Waterman score: 1216; 99.5% identity (99.5% similar) in 188 aa overlap (77-264:10-196)

         50        60        70        80        90       100      
pF1KB7 RATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
                                     ::::::::::::::::::::::::::::::
NP_945                      MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQ
                                    10        20        30         

        110       120       130       140       150       160      
pF1KB7 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_945 YHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQE
      40        50        60        70        80        90         

        170       180       190       200       210       220      
pF1KB7 HQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
NP_945 HQQQVLGAIERAKQVTAPELNSIIRQ-LQAHQLSQLQALALPLTPLPVGLQPPSLPAVSA
     100       110       120        130       140       150        

        230       240       250       260    
pF1KB7 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
       ::::::::::::::::::::::::::::::::::::::
NP_945 GTGLLSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD
      160       170       180       190      

>>NP_001269682 (OMIM: 605132) transducin-like enhancer p  (704 aa)
 initn: 839 init1: 769 opt: 854  Z-score: 840.8  bits: 164.7 E(85289): 4.3e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
NP_001                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_001 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
NP_001 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
NP_001 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

NP_001 HRNSADYSSESKKQKTEEKEIAARYNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVP
      220       230       240       250       260       270        

>>XP_016870572 (OMIM: 605132) PREDICTED: transducin-like  (722 aa)
 initn: 868 init1: 769 opt: 854  Z-score: 840.6  bits: 164.7 E(85289): 4.4e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
XP_016                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_016 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
XP_016 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
XP_016 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

XP_016 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNENEKSTTPVSKSNTPTPR
      220       230       240       250       260       270        

>>NP_008936 (OMIM: 605132) transducin-like enhancer prot  (773 aa)
 initn: 868 init1: 769 opt: 854  Z-score: 840.2  bits: 164.7 E(85289): 4.7e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
NP_008                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_008 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
NP_008 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
NP_008 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

NP_008 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
      220       230       240       250       260       270        

>>XP_011517268 (OMIM: 605132) PREDICTED: transducin-like  (798 aa)
 initn: 868 init1: 769 opt: 854  Z-score: 840.0  bits: 164.7 E(85289): 4.8e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
XP_011                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_011 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
XP_011 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
XP_011 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

XP_011 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
      220       230       240       250       260       270        

>>NP_001269677 (OMIM: 605132) transducin-like enhancer p  (805 aa)
 initn: 868 init1: 769 opt: 854  Z-score: 839.9  bits: 164.7 E(85289): 4.8e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
NP_001                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
NP_001 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
NP_001 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
NP_001 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

NP_001 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
      220       230       240       250       260       270        

>>XP_011517262 (OMIM: 605132) PREDICTED: transducin-like  (830 aa)
 initn: 868 init1: 769 opt: 854  Z-score: 839.7  bits: 164.7 E(85289): 4.9e-40
Smith-Waterman score: 854; 68.9% identity (87.2% similar) in 196 aa overlap (72-263:10-204)

              50        60        70        80         90       100
pF1KB7 GTRPGRATAGPAASTRAAGSLFFDRWGNRGPAGCRGSSHLPQQ-LKFTTSDSCDRIKDEF
                                     :   . . : : : .::: :.::::::.::
XP_011                      MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEF
                                    10        20        30         

              110       120       130       140       150       160
pF1KB7 QLLQAQYHSLKLECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVL
       :.::::::::::::.::::::.:::::::::::::::::::::::::::::::.:::::.
XP_011 QFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNAICAQVI
      40        50        60        70        80        90         

              170       180       190       200       210       220
pF1KB7 PYLSQEHQQQVLGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPS
       :.:::::::::. :.:::::::  :::.:: :::::..::. ..: .:::: : :::::.
XP_011 PFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPA
     100       110       120       130       140       150         

              230        240        250        260                 
pF1KB7 LPAVSAGTGLLSLS-ALGSQAHLS-KEDKNGHDGDTHQED-DGEKSD             
       .: .....:::.:: :::.:.::  :..:. ::.: ::.: :. ::              
XP_011 IPPIGSSAGLLALSSALGGQSHLPIKDEKKHHDND-HQRDRDSIKSSSVSPSASFRGAEK
     160       170       180       190        200       210        

XP_011 HRNSADYSSESKKQKTEEKEIAARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENG
      220       230       240       250       260       270        




264 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 14:46:08 2016 done: Sat Nov  5 14:46:10 2016
 Total Scan time:  6.940 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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