GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:40:04

Sequence gi568815588r:27575232_27843415 : 268184 bp : 39.92% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  13538  14122  585  1  0   46   42   222 0.864   9.33
 1.02 PlyA +  14368  14373    6                               1.05

 2.00 Prom +  19420  19459   40                              -2.35
 2.01 Init +  25003  25051   49  0  1   88   58     1 0.132  -1.74
 2.02 Term +  26278  26411  134  2  2   24   41   188 0.284   4.97
 2.03 PlyA +  27756  27761    6                               1.05

 3.04 PlyA -  29882  29877    6                               1.05
 3.03 Term -  31698  31452  247  2  1   69   43   188 0.248   6.68
 3.02 Intr -  33264  33042  223  1  1   48   68   118 0.171   2.06
 3.01 Init -  41290  41212   79  1  1   78   93    48 0.894   5.59
 3.00 Prom -  49379  49340   40                              -5.35

 4.00 Prom +  59035  59074   40                              -3.05
 4.01 Init +  63070  63139   70  0  1   85   89    18 0.150   2.86
 4.02 Intr +  71061  71185  125  1  2   95   66    23 0.054   0.18
 4.03 Intr +  78383  78548  166  1  1   79   42    89 0.008   2.01
 4.04 Intr +  84560  84838  279  0  0   83   89   121 0.012   8.23
 4.05 Intr +  85216  85467  252  2  0    3  115   206 0.694  11.28
 4.06 Term +  88003  88175  173  2  2   13   43   162 0.853   1.21
 4.07 PlyA +  88315  88320    6                               1.05

 5.16 PlyA -  90459  90454    6                               1.05
 5.15 Term - 100250  99998  253  1  1   83   48   213 0.436  10.93
 5.14 Intr - 100323 100290   34  1  1  107  105    29 0.200   2.86
 5.13 Intr - 103431 103317  115  0  1   83   91    24 0.111   1.30
 5.12 Intr - 112830 112757   74  1  2   87   46    80 0.060   1.91
 5.11 Intr - 126959 126771  189  0  0   54   54    90 0.001   0.84
 5.10 Intr - 159560 159225  336  0  0   63  111   317 0.800  26.07
 5.09 Intr - 160143 159990  154  0  1   39   76   118 0.992   4.42
 5.08 Intr - 165953 165906   48  2  0   60   91    48 0.084   0.26
 5.07 Intr - 166263 166114  150  0  0   41   89   125 0.635   7.34
 5.06 Intr - 166753 166614  140  2  2   60   76   148 0.740  10.06
 5.05 Intr - 167244 167050  195  1  0   -5   58   141 0.506   0.26
 5.04 Intr - 167787 167490  298  0  1   22   43   220 0.841   6.42
 5.03 Intr - 168160 167942  219  1  0   17   77   119 0.060   1.28
 5.02 Intr - 168357 168298   60  0  0   90  100    76 0.097   7.01
 5.01 Init - 169353 169186  168  0  0   81   69   245 0.123  19.48
 5.00 Prom - 174060 174021   40                              -8.45

 6.03 PlyA - 174485 174480    6                               1.05
 6.02 Term - 176546 176405  142  1  1   91   51   129 0.786   5.92
 6.01 Init - 176717 176626   92  2  2   79   43   108 0.834   5.41
 6.00 Prom - 177033 176994   40                              -5.45

 7.03 PlyA - 177194 177189    6                               1.05
 7.02 Term - 192335 192154  182  0  2   95   54   166 0.874  10.69
 7.01 Init - 196205 196052  154  2  1   76   44    70 0.901   1.59
 7.00 Prom - 196823 196784   40                              -5.25

 8.00 Prom + 199142 199181   40                              -4.65
 8.01 Init + 203360 203398   39  1  0   58   98    19 0.036   0.17
 8.02 Intr + 208815 208884   70  2  1   52  100    32 0.023  -1.36
 8.03 Intr + 210687 210850  164  1  2   88   92    85 0.027   7.67
 8.04 Term + 237307 237456  150  0  0   76   39   149 0.205   5.73
 8.05 PlyA + 238487 238492    6                               1.05

 9.04 PlyA - 238907 238902    6                               1.05
 9.03 Term - 239618 239538   81  2  0   84   49   108 0.683   3.21
 9.02 Intr - 242885 242747  139  1  1   15   84   112 0.187   3.05
 9.01 Init - 245087 244915  173  2  2   76   53   114 0.407   5.66
 9.00 Prom - 245141 245102   40                              -7.95

10.00 Prom + 246361 246400   40                              -4.75
10.01 Sngl + 250685 250981  297  1  0   56   47   203 0.695   8.49
10.02 PlyA + 253420 253425    6                               1.05

11.03 PlyA - 253443 253438    6                               1.05
11.02 Term - 259340 259226  115  1  1   84   45   126 0.033   4.96
11.01 Intr - 260809 260745   65  1  2  136   -7   126 0.009   4.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 228890 228981   92  1  2   48   77   110 0.915   5.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_1|194_aa
MKRNEQNLQEIWDYVKRPNLHFIGVPENDGENGTKLENTLQDIIQENFPNLARQANIQIQ
EIQRTPQRYSSRRAIQRHIIARFTKVEIKEKLLRGAREKGQVTHKVKTIRLTAHLSAEIL
QARRQWGSIFNILKEKNFQPRISCPAKLSFVNEGEIKSFTDKQILRDFVTKRPALQELLK
EALNMERKNRYQPP

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_1|585_bp
atgaaaaggaatgaacaaaacctccaagaaatatgggactatgtgaaaagaccaaaccta
cattttattggtgtacctgaaaatgatggggagaatggaaccaagttggaaaacactctt
caggatattatccaggagaacttccccaacctagcaagacaggccaacattcaaattcag
gaaatacagagaacaccacaaaggtactcatcgagaagagcaatccaaagacacataata
gccagattcaccaaggttgaaattaaggaaaaattgttaaggggagccagagagaaaggt
caggttacccacaaagtgaagaccatcagactaacagcacatctctctgcagaaatccta
caagccagaagacagtgggggtcaatattcaacattcttaaagaaaagaactttcaaccc
agaatttcatgtccagccaaactaagcttcgtaaatgaaggagaaataaaatcctttaca
gacaagcaaattctgagagattttgtcaccaaaaggcctgccttacaagagctcctgaag
gaagcactaaacatggaaaggaaaaaccgataccagccaccgtaa

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_2|60_aa
MEFHHIGQVGFEHLTSDTQDPNCIACWIEEQPVVEELAFATALAAKTSYSSRAALIFQLK

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_2|183_bp
atggagtttcatcacattggccaggttggttttgaacacttgacctcagatacccaggac
ccaaactgcatagcatgttggattgaggagcagcccgtggtagaagaattggcctttgca
acggctctagcagccaaaacttcatattcatcaagagcagctttgatcttccagctgaaa
taa

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_3|182_aa
MGNLKQLFNLQASLNVTAFHQLHFEKGQVVEEKEKILTFHLNFRFKELGVFLSGLKEKQL
YQRKEWTCYNQHLQQEVSLPTFSGVSWYIQTSYSFLKSQTCLARCQHLAPSAGGRKPMST
KNQPSSVKREPTTPDDQNHQFAYVDTEIRQSVDFNFSHMGSRSPSNNQEERLCLSVKMSW
MA

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_3|549_bp
atgggaaacctgaagcagctcttcaatctccaggcttcacttaatgttactgctttccac
cagctccactttgagaaagggcaggttgtagaagaaaaagaaaagatattaacctttcac
ctgaatttcaggtttaaagagttgggcgttttcctatctggccttaaagaaaagcagctt
tatcagaggaaagaatggacctgctacaatcagcatttacaacaggaagtaagcttgcca
actttcagtggtgtaagctggtacattcagacttcttacagcttcctgaaatcacagacc
tgccttgccagatgccagcatcttgcaccttctgcaggtggaagaaagcccatgagtaca
aagaaccaaccctcctcagtcaaacgagaacccacgactccggacgaccagaatcaccaa
tttgcttatgtagacactgaaataagacaaagtgtcgactttaattttagccatatggga
agtcgcagtccttcaaacaatcaggaagaacggctttgcctttcagtgaaaatgtcttgg
atggcttag

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_4|354_aa
MERFGLGDERREKEVSGVSSSFCEHYTSIWRDKTCYTHETITEKCNDAIHLFTKLETDSR
NVMHISLAESLVVVALQERNREGLKLHECLLGPSVRTDYETERGHPLRGLSAIVREAQPT
GSFTCLLLLVVKLKQTVLPGLRALGLGRGQSGHQPNWWFGMLVPEIWPVSRTGSGAQAVA
DHVVQVLFCFSGRSAEWEELWVLPRRTLWQHRSEKKKSSEAAEEDLRTMEEQVRGTWGET
VQGGSKGGERNGATSESEEDNELDCDPLRESQGPQHSERMGSHSRAPGCAFTHCIPEVKE
EIDFEKQAQRGDERENKHGGENNNSELPEDKEEMEDNKQSQSKIKRHENNTMKT

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_4|1065_bp
atggagaggtttggattaggagatgagaggagggaaaaagaggtttctggggtcagtagc
agtttctgtgaacattatacatctatttggagagacaagacatgttatacccatgagaca
attacagaaaaatgcaatgatgcaattcatctattcaccaaactagaaacagattccaga
aatgtcatgcacataagccttgcagagtccctggttgtggtggccttgcaggaaagaaat
agagagggtctcaaactccatgaatgtctgctgggtcctagtgtgaggacagattatgag
acagagaggggacaccctcttagaggactttcagccattgtaagggaggctcaacccaca
gggtcctttacctgcctcctacttctggtggtgaagctaaagcaaactgttctacctggt
ttgagggctttagggctgggccggggtcaaagtggtcaccagcccaattggtggtttggc
atgctggttccagagatttggcctgtttcccgcacaggcagtggggcccaggctgtggcc
gaccacgtagtccaagtgctgttttgtttctcaggaaggtctgcagagtgggaggagctg
tgggttctgcccagaaggactttgtggcagcacagaagtgaaaaaaaaaaaagcagcgag
gcagcggaggaggatctgagaacaatggaggaacaagtcagaggaacttggggtgagact
gttcagggagggagcaaaggaggagagaggaatggagcaacttcagagagtgaagaagat
aatgagctggactgtgatcccctgagggagagtcaagggcctcagcattctgaacgaatg
ggatcccacagcagggccccaggatgtgcatttactcactgtatcccagaagttaaagag
gaaatagattttgaaaagcaagctcaaagaggggatgaaagagaaaacaagcacggaggg
gagaataacaacagtgagcttcctgaggacaaggaagaaatggaagataataaacaaagc
caaagcaaaatcaagagacatgaaaataataccatgaaaacttga

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_5|810_aa
MGRAKSAARLGAVTLRLRGRADLLLTPVRGRQRLRASATPEVSCWLSPTVAAVAREPGDP
AKFKALNLQGSEHSQPLSGAVLFEDGGASERERGGRPYSGVLDSPHARPEVGIPDGPPLK
DNLGLRHRRTGYAHSPGGPARLRPGGVGVLQRAWWRLRAPGAAPRPSAAWTSELGVICPS
PDCGCRCAAEGEEKGLSSVQRNRRSRAVGESRLRLRGLLFGHSSPSPEPRGSPGPRSREG
RLPPGSPGPACSAASLLSKTEIRFRQNVTTSRFGWNCISKCLKRQKPRRLRRRRASLGER
LGSLAAARDTSRTLGDLSPDHKRRKASGSRQEIPEGSFESQPHTLPGLPGQGHSRVRRQR
NGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQFSADAPCRKE
CRMRCQVSNWFANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGE
NPPRTHMNEGGYNTPVHHPVIKSENSVIKAGVRPESRASEDYVAPPKYKSSLLNRYLNDS
LRHVMATNTTMMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTVALGDAFGFVR
AWLQKRVLYSLIFLDSVLQLTLNRRNLPFVEGVEISFALKANEVLMYSLLEIGDKDEMQR
SQAAGQLGTLMLSERAEAPCIDGIDTLTGSATHNIFDSHRLSSCLCSNHSEIDSSDTLEN
GSNKGESDGIFNANCSEFDRLLSVLLNSSAANRKGPSKDDTYWKEINAAMALTNLAQGKD
KLQGTTSCIIQKSSHIAEVKTVKVPLVQQF

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_5|2433_bp
atggggcgggcgaagtccgccgcgcgccttggggctgtaactctgcggctccgcggccgc
gcggacttgctcctgacgccggtgcgcggcaggcagaggctcagggcctccgcgacccca
gaggtgagctgctggctctccccgacagtggcagcagtggcccgggagcccggcgacccg
gccaagttcaaggccctgaacctgcaggggtctgagcactctcagccactcagcggtgcg
gtgctgtttgaggacggaggcgcctcggagcgggagcggggtggccggccctacagcggt
gtcctggacagtcctcacgcccgccccgaggtgggcattcccgacggcccgcccctcaag
gacaacctcggcctgagacaccggaggaccgggtatgcgcactcccctgggggccctgcc
cgcctgcggcccggaggggtgggggtgctccaaagagcttggtggagactaagggcgcca
ggagctgcccctcggccctccgctgcctggacctcggagttgggggttatttgcccctct
ccggactgtgggtgccggtgcgcggctgagggcgaggaaaaaggactgagctcggtgcag
agaaacaggcgaagccgagcagtcggggagtccaggctcaggctccgcggacttctcttc
ggtcactcgagcccctcgccagagccccgcggctcgcctggcccaaggagtcgggaaggt
cgcctcccgccagggagtcccgggcctgcttgttctgcggcgtcgctgcttagtaaaaca
gagattcggtttcgtcaaaatgttactaccagtcgtttcgggtggaattgcatttcaaag
tgtttaaagaggcagaaacccaggaggctccggcgcaggcgcgcaagcctcggggagcgg
ctgggctcgctggcggccgcgcgcgacacctcccggaccctcggcgacctttcccctgac
cacaagcgacggaaagcctctgggagcagacaagagatccccgagggaagtttcgagagc
cagccgcataccctgccaggcctgccaggccagggccactcgagggtgcggcgccagcgg
aatggcgggaaggtgaggcacaagcggcaggccctgcaagacatggcgcgacccctcaag
cagtggctttacaagcaccgtgacaacccgtaccccaccaagaccgagaagatactcttg
gccctcggctcgcagatgacgctagtgcagttcagtgcagatgctccgtgcaggaaagaa
tgcaggatgcgctgtcaggtgtcaaattggtttgctaatgcaagacgtcggcttaagaat
accgttcgacagccagatttaagctgggctttgagaataaagttatacaacaagtatgtt
caaggcaatgctgaacggcttagcgtaagcagtgatgactcatgttctgaagatggagaa
aatcctccaagaacccacatgaacgaagggggctataataccccagttcaccatcctgtg
attaaaagtgagaattcggtcatcaaagcgggagtgaggccagagtcacgggccagtgag
gactacgtggcaccccccaaatacaagagcagcttgttgaaccgttaccttaatgactct
ttgagacatgtcatggccacgaacactaccatgatgggaaaaacaaggcaaagaaaccac
tcgggatcttttagctccaatgaatttgaggaagaattagtgtctccatcgtcatcagaa
actgaaggcaactttgtctatcgcacagtggctttgggagatgcttttggctttgtccgt
gcctggcttcagaagagagttttgtactccctcattttcctggattcagttctacagcta
actttgaatagaaggaatttgccctttgtggaaggagtggagatcagttttgcattgaaa
gctaatgaggtcttaatgtattctctcctggagattggtgataaagatgaaatgcagaga
agtcaagcagctggccagcttggcacgctgatgctaagtgagagagcagaggctccatgc
attgatggcattgatacattgacgggttctgcaacccataacatatttgatagccacagg
ctttcttcttgtctgtgcagtaaccactctgagattgacagttcagacactctggaaaac
ggatccaataagggtgaaagcgatggcattttcaatgcaaactgcagtgagtttgatcgt
ttactttctgttttgcttaactccagcgcagctaacagaaaaggaccaagcaaggatgac
acgtattggaaggagatcaacgcagctatggccttaacaaatcttgcacagggaaaggac
aaactgcagggaactaccagctgcatcatccagaagtcgtcccatatagcagaagtaaag
actgtcaaagtgccgctggtgcagcagttttaa

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_6|77_aa
MEFNHHRGDHGAQKAFAIRPFTEKGFWTQVRLFAARLTWVTACYGLTCVPSKFICDTLTP
NGTELGDKAFNEVNKVK

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_6|234_bp
atggagttcaatcatcatcggggagatcacggggcccagaaagcttttgctatccggccc
tttacagaaaaaggtttttggactcaggttaggttatttgctgctcggctgacatgggtc
actgcctgttacggactgacctgtgtcccctcaaaattcatatgtgacaccctaaccccc
aatggaactgaacttggagacaaggcctttaatgaggtgaataaagttaaatga

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_7|111_aa
MRSTCESRSPGAQAHFKTETSPTGLEEASPLDSLSSHQLGSSITQGNTTERTVHLMETFQ
VFVPELADFLVSTYKSPMGVRGEVQAISAVDGNHSPGTSSSSGFLITALPE

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_7|336_bp
atgagaagcacttgtgaaagtcgcagcccaggggcacaggctcatttcaagactgagacc
tcccccacaggactagaggaagcctcccctctcgactccttatcttcacaccagttgggc
tccagtatcacacaggggaatacaactgaaagaacagtccatctcatggagacatttcag
gtttttgttccagaattagcagactttctggtgtccacatacaagagtcccatgggtgtc
agaggtgaggtgcaggccatcagtgctgttgatgggaatcacagtcctggcaccagcagc
agtagtggtttcttgatcacagcacttcctgaatga

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_8|140_aa
MIFAMGLCSTSPRRSGKEFVDIFQNHHNCHQRTVNKGRSNKAFSFISMLVCHLGLLLTYL
RPQNVEGWACRSGSIWKPEALDSKRVLRKYQQEPACGYWIYNQLQLPGDPGQGTQPYPVE
AVTHKEEKKGHKNKNINLKT

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_8|423_bp
atgatctttgccatgggtctttgcagtacctctcccaggaggagtggtaaggaatttgtg
gacatatttcagaaccaccacaattgccatcagaggacagtgaataaaggcagatctaat
aaggctttctctttcatctcaatgttggtgtgccatcttgggttgcttcttacttacctg
agacctcagaatgtggagggctgggcctgccgttctggctctatttggaagcccgaggct
ctggacagcaaaagagtgctcaggaagtaccagcaagagccagcctgcggatattggata
tacaaccagctgcagcttcctggagatcctggtcaggggacccaaccatatccagtagaa
gctgtcacacataaggaggagaagaagggacacaagaataaaaacattaatctaaagaca
taa

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_9|130_aa
MTRSEGGWAKRRLDFDRHQVKGFLSKRAVQGGSSQWHVEPGPLVSMEVSQRQGRAWSRLA
ALTFNYLVVMWKSEISRLTVGTPYSRITKVTMVDVGYEEVSKSHDSVIGEGTGKNRVGFM
DSYGFPGGML

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_9|393_bp
atgaccaggtctgagggaggatgggcgaaacgcaggctagattttgacaggcatcaggtc
aagggtttcctttccaagagagccgtacagggtggcagcagccagtggcatgtggagcct
gggccattggtgtccatggaggtcagccagcgacaaggcagggcctggagcaggctggca
gcgctcacattcaattatttggtagtgatgtggaagagtgaaatctccaggcttacagtt
ggcactccatactccaggataacaaaggttaccatggtggatgtgggctacgaggaggtc
agtaaaagccatgactcagttattggtgaaggcacagggaagaacagagttggatttatg
gacagttatggttttcctggagggatgttgtaa

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_10|98_aa
MTPHPHRKQTRQKYFPPSTSPLTSDLDLLNSIDLHFNSTLINQPLLWSYPDLSNTSDCFI
SASRCCLSEIPGSGGRRMGSRTSRGTDLPVQSPCSGPP

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_10|297_bp
atgacacctcatcctcatagaaaacaaacaagacaaaaatattttcctccaagcacctcg
cctctaacttcagaccttgacctcctcaactccattgatcttcacttcaattccacatta
attaatcaaccattattatggtcatacccggaccttagtaataccagtgactgcttcatc
tctgcctctcgttgctgtctatcagaaattccaggttctggaggacgcagaatgggatca
agaacatcaagaggcactgatctaccagtgcagtctccctgctctggtccaccatga

>gi568815588r:27575232_27843415|GENSCAN_predicted_peptide_11|59_aa
ATQREDDEDEDLYDDPLPLNVYTVPWMSTNLHPPLFDDSTWQPAREDASQLPLSLGVAV

>gi568815588r:27575232_27843415|GENSCAN_predicted_CDS_11|180_bp
gctactcaacgggaagatgacgaggatgaagacctttatgatgatccacttccacttaat
gtatacacagtcccctggatgtccaccaaccttcatcctcccctctttgatgatagcaca
tggcagccagccagagaagatgcttctcagcttcccttgagtcttggtgtggccgtgtga