GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:37:13

Sequence gi568815590f:30285093_30647420 : 362328 bp : 41.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1019   1168  150  0  0   78  115    49 0.528   5.81
 1.02 Intr +  19247  19446  200  0  2   24   55   127 0.000   1.15
 1.03 Intr +  31234  31371  138  0  0   72   56   126 0.050   7.54
 1.04 Term +  41013  41165  153  2  0   44   45   124 0.299   0.64
 1.05 PlyA +  43691  43696    6                               1.05

 2.00 Prom +  43728  43767   40                              -4.35
 2.01 Init +  47849  48028  180  1  0   83   48   109 0.089   5.63
 2.02 Intr +  65142  65348  207  2  0   95   63   132 0.409   9.75
 2.03 Intr +  66940  67563  624  0  0   29   22   876 0.407  66.61
 2.04 Term +  67651  68250  600  0  0   72   48   925 0.994  80.44
 2.05 PlyA +  68411  68416    6                               1.05

 3.00 Prom +  76770  76809   40                              -4.75
 3.01 Init +  98880  99066  187  2  1   67   36   170 0.523   8.97
 3.02 Intr +  99968 100298  331  0  1   18   78   159 0.134   1.66
 3.03 Intr + 110777 110906  130  2  1   82    2   113 0.191   1.88
 3.04 Term + 137887 138000  114  0  0   95   48   123 0.201   6.59
 3.05 PlyA + 139189 139194    6                               1.05

 4.03 PlyA - 139785 139780    6                               1.05
 4.02 Term - 155520 155393  128  1  2   61   48   142 0.088   4.96
 4.01 Init - 157636 157351  286  1  1  102   89   310 0.081  27.79
 4.00 Prom - 164919 164880   40                              -5.45

 5.00 Prom + 172936 172975   40                              -5.65
 5.01 Init + 188937 188939    3  2  0   91   80     0 0.585  -0.45
 5.02 Intr + 189687 189764   78  2  0  104   77    21 0.656   1.43
 5.03 Intr + 192707 192745   39  1  0  113  110    14 0.920   3.60
 5.04 Intr + 194223 194285   63  2  0   99  101    75 0.983   7.90
 5.05 Intr + 219194 219344  151  1  1   73  103   136 0.653  12.41
 5.06 Intr + 259402 259532  131  2  2  123   91    78 0.989  11.09
 5.07 Intr + 265628 265871  244  1  1   46   41   171 0.633   4.35
 5.08 Intr + 270271 270363   93  2  0   53   56    81 0.109   0.42
 5.09 Intr + 271183 271555  373  2  1   65   21   235 0.105   7.70
 5.10 Intr + 272023 272233  211  1  1   37   58   169 0.523   6.79
 5.11 Intr + 276459 276634  176  2  2   17   81   188 0.919   8.82
 5.12 Intr + 280759 280951  193  1  1  111   32   119 0.910   7.17
 5.13 Intr + 281084 281171   88  1  1   98   89    86 0.927   8.32
 5.14 Intr + 281385 281514  130  1  1   92   82    66 0.910   5.23
 5.15 Intr + 287193 287344  152  0  2   67   89   133 0.955  10.19
 5.16 Intr + 290887 291001  115  2  1   74   38   172 0.814   9.39
 5.17 Term + 291240 291396  157  0  1   19   42   146 0.578  -0.48
 5.18 PlyA + 291670 291675    6                               1.05

 6.04 PlyA - 293247 293242    6                               1.05
 6.03 Term - 293945 293829  117  2  0  106   50   135 0.992   9.06
 6.02 Intr - 295304 295189  116  0  2   47   62   163 0.677   8.85
 6.01 Init - 310438 310336  103  1  1   67   64    68 0.134   2.75
 6.00 Prom - 310876 310837   40                              -6.15

 7.07 PlyA - 311354 311349    6                               1.05
 7.06 Term - 312041 311734  308  0  2  -83   48   344 0.303   7.59
 7.05 Intr - 322058 321965   94  2  1   59  105    75 0.857   4.92
 7.04 Intr - 327389 327207  183  2  0   65   84   224 0.999  18.76
 7.03 Intr - 329623 329516  108  1  0   55   94    97 0.985   6.56
 7.02 Intr - 334840 334709  132  1  0  114   63    40 0.449   4.02
 7.01 Intr - 350031 349940   92  1  2   83  115    66 0.065   7.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  19269  19180   90  1  0   94   75    59 0.904   4.25
S.002 Init -  19563  19554   10  0  1   93   94     0 0.817   1.97
S.003 Sngl - 155677 155393  285  1  0   60   48   228 0.902  11.29
S.004 Sngl - 157636 157292  345  1  0  102   40   372 0.842  27.59
S.005 Term + 266089 266273  185  2  2  117   36   140 0.893   8.42
S.006 Sngl - 339704 339186  519  2  0   60   55   224 0.936  12.09
S.007 Intr + 356070 356209  140  0  2   59  103    24 0.935   0.19
S.008 Term + 360354 360505  152  1  2   71   41    80 0.834  -1.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_1|213_aa
XASAKPILAKKLSLNPPARRDCSHFCFLTALESSCSIYNLPPYPPVNAQEACLAVISTLE
KRRETAHTISIMLVKEGMLVAWSCCDKVPQTRWLKQQTFIVSQQSKIKVSAGLLLLRILL
PQQEGDQRDARQVLNTSSQALLEDVANIPGDLETQGLLGTAFSVQEHREEKLGKVDVVSN
KSNEFSWELPILKSEVFSRDVPDTMKDFHLEVE

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_1|642_bp
naggccagcgcaaaacccatcttggccaagaagttgtccctaaaccctcctgctagaagg
gactgctcccacttttgctttcttacagctcttgaatcctcctgcagcatttataacctt
ccaccttatcctccagttaatgcacaggaagcgtgtttagcggtaataagtactctggaa
aagagaagggaaacagcgcatacgatttcaataatgctggtcaaggaaggtatgttggtt
gcctggagctgctgtgacaaagtaccacaaacaaggtggcttaaacaacagacatttatt
gtgtcacagcagtccaaaatcaaggtttcggcaggtttgctcctcctgaggatccttctt
ccgcagcaggaaggagaccagagagatgccaggcaggtcttaaacacatcctcccaagcc
ctcttagaggatgttgcaaacatccctggagacctggagacccagggccttctgggaaca
gctttctctgtccaggaacacagagaggaaaaactaggaaaggtggatgtggttagcaac
aagagcaatgagttcagctgggaacttcccatcttgaagagtgaggtatttagcagagat
gtaccagacacaatgaaagatttccacttggaagttgagtaa

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_2|536_aa
MPGQKIAFVIQTCIDVLWGKGFLLQSRQQPPGAQQYVPTSPTTETQMNTILIEMEGKTLE
CSEHGYFLLSLELRKQLKGDAAQSLAVNGDVKDHGGVDCDLWHRALGGPSICKAFLFLTS
LTILRSTDKAGQRGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYSEATDGKY
VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV
IESYNATLSVHQLVENTDETYCIDNEALYDICFRTLRLNADLCKLAVNMVPFPRLHFFMP
GFAPLTSHGSQQYRALTVPELTQQVFDAKSMMAACDPRHGRYLTVAADFRGRMSMKEVDE
QMFNVQNKNSSYFVEWIPNNIKTAVCDIPPRGLKMAVTFIGSSTAIQELFKHISEQFTAM
FRRKAFLHWYTGEGMDEMEFTEADSNMNDLVSEYQQYQDATAEEEEDFGEEAKEEA

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_2|1611_bp
atgcctggccaaaaaattgcctttgttattcaaacttgcattgatgtactgtggggaaag
ggctttctgctgcagagcagacagcagccaccaggagcccagcagtatgttcctacttcc
ccaaccacagaaacccagatgaatacgattttgatagaaatggaaggaaagacattagag
tgctcagagcatggatattttctgctgtctttggaacttcgcaaacaactcaaaggagat
gcagctcaaagtctcgccgtcaatggcgatgtcaaagaccatggtggggttgactgtgac
ttgtggcatagggctctgggtggccccagcatctgcaaagcattcttgtttttgacgagc
ttaacaattttaagaagcactgataaggctggtcagcgtggcaaccagatcggtgccaag
ttctgggaggtgatcagtgatgaacatggcatcgaccccactggcacctaccacggggac
agcgacctgcagctggaccgcatctccgtgtactacagtgaagccactgatggcaaatat
gttcctcgtgccatactggtggatctagaacctgggaccatggactctgttcgctcaggt
ccttttggccagatctttagaccagacaactttgtatttggtcagtctggggcaggtaac
aactgggccaaaggccactacacagagggcgccgagctggttgattctgtcctggatgtg
gtacggaaggaggcagagagctgtgactgcctgcagggcttccagctcacccactcactg
ggtgggggcacaggctctggaatgggcactctccttatcagcaagatccgagaagaatac
cctgatcgcatcatgaataccttcagtgtggtgccttcacccaaagtgtctgacaccgtg
atcgagtcctacaatgctaccctctccgtccatcagttggtagagaacactgatgagacc
tattgcattgacaacgaggccctctatgatatctgcttccgcactctgaggctcaatgct
gacctctgcaagttggcagttaacatggtccccttcccacgtctccatttctttatgcct
ggctttgcccctctcaccagccatggaagccagcagtatcgagctctcacagtgccggaa
ctcacccagcaggtcttcgatgccaagagcatgatggctgcctgtgacccccgccacggc
cgatacctcaccgtggctgctgacttccgtggtcggatgtccatgaaggaggtcgatgag
cagatgtttaacgtgcagaacaagaacagcagctactttgtggaatggatccccaacaat
atcaagacagctgtctgtgacatcccacctcgtggcctcaagatggcagtcaccttcatc
ggcagtagcacggccatccaggagctcttcaagcacatctcggagcagttcactgccatg
ttccgccggaaggccttcctccactggtacacaggcgagggcatggacgagatggagttc
accgaggctgacagcaacatgaacgacctcgtctctgagtatcagcagtaccaggatgcc
accgcagaagaggaggaggatttcggtgaggaggccaaagaggaggcctaa

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_3|253_aa
MGLKPCPEKAGPEWAVPGVPRVLMLSFKQQRKNRVWLGKGGLRARGANPSVKAGKLKVAH
IPALPGPARKDREDEQRRQSREGEHPERGQPSGGGGTGRLGVVAGATRDPVRAAGGARAR
GAAVEEGSGMARAPDAAPQCGPGRVDLGSVCFCVHARLRAPNCVTPRTFRRLLAFVQAIL
YARKALHSDIISLILAIHLDLNSDVTPERPLTSKFKVHFVAIMFIAAIPSGVENQDLAPG
LRAVEMYLAKSMP

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_3|762_bp
atgggtttgaagccctgtcctgaaaaagccggcccggagtgggctgtccccggtgtccct
cgagttctcatgctgtcattcaagcagcagaggaagaaccgggtctggctcgggaagggt
gggcttagggccaggggtgcaaatccctcggtaaaagccggcaaactaaaagtcgcacac
atcccagccctgcccggcccggcgaggaaggaccgggaagatgaacaacggcggcaaagc
cgagaaggagaacaccccgagcgaggccaaccttcaggaggaggaggtactgggcggctc
ggtgtggtggcgggggcgacgcgggacccagtgcgggcggccggcggggcgcgggcccgg
ggcgcggcggtggaagaaggttcaggcatggcccgtgccccggacgcagccccacagtgt
ggcccggggagggtggatctcgggagcgtgtgtttttgtgtccacgcgcgtctgcgggcc
ccaaattgcgtaactccaaggacttttcggagacttttggcctttgtgcaagccattctg
tatgcccggaaagccctacactcagacattatcagcctcatccttgccattcatttagat
ctcaattcagatgtcaccccagagagacctttgacctccaagtttaaagttcattttgta
gccatcatgttcattgcagctatcccaagtggggttgagaaccaggacctggctccaggt
ctccgagcagttgaaatgtacctggcaaagtccatgccttag

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_4|137_aa
MAASVGRATRSAAAHLTQLPPAPRAQRTSPAQPDEGKRRDADPWRTGPTVNKTGSIPGRL
RGWENAIKMEKAATGCEGLQKQKIKRQKPTFWSCHALFTIARWWKQPKHPFDRRMEKYDG
SLKKEGNSGTRYDMDEF

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_4|414_bp
atggcggccagtgtgggccgcgcaaccagaagtgcggccgcgcacctgacccagcttccg
cctgcacctagagctcagcgcaccagcccggctcagccagacgaaggcaaacgaagagat
gcggatccctggaggactggccccaccgtgaacaaaacaggaagcattccaggaagactg
cgggggtgggagaatgcaattaaaatggaaaaggcagcgactggctgcgaaggtttacag
aaacagaagataaagcgccagaaacccacattctggagttgccacgcattattcacaata
gccaggtggtggaagcaacccaaacatccatttgacagaaggatggaaaaatacgatgga
agccttaaaaaggaaggaaattctggcacacgctacgacatggatgaattttga

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_5|798_aa
MVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL
NGIRFDPEIPQTLRLEFAKANTKMAKNKLVGTPNPSTPLPNTVPQFIAREPYELTVPALY
PSSPEVWAPYPLYPAELAPALPPPAFTYPASLHAQLTPALGELIQKRGLPKPGWTRPPEP
PSDRKYIRGGGGWAAESQRRNGPCPHELLYTNPLSLTFPAAALSHFPIGETGERITVEKI
PRVVHVALDVTGCVKCLARSLTQTKCQARNPPSCHSGVRLDQADESLKTGCTLVPNPAGT
CASENVRAVCESWSERLGQGFLLAVTCTESRTMPSTVQLSSPGSPPPPVSPVKHRHVLAS
SGLSAPTHTQAAPVTPLRSTLTQCTQTHHPLLWSSDRWSYLAWSPEETQCTGSLTESWCR
QKLRYVLSLRFLTQASEERTAREEAHGEEEVPRPPCARTRDKHKLTVEEVGETGREAPCQ
AHLRAKSQQRKSSPQRVESGLEKQGAPATSVSQMLQESQAWAFGQSSGSRPQPLGCNHRD
VGVESCLLGLQPPNAPSAKSSHAFLGMSFLAGPQKPPLTCSAKSSNRPVFKTEAAPGGGY
CAPLTGDLSPSQVPGDSARSSLTSAPTRPAREGHPRTATDTFLKPITPVFGAHHVLLSKT
NYMYPTLQTRRQQISFPLSGFGRAKQALAIELRHKEIKGGSRYRGKPENFKRLTDKDRAV
HSQSLERWGWKERDVLRCLSTKPLLNSRATRNGQRREHDFNLVFLVDMFSDTQKNCEETA
SLYSIPRRCCRLGSRPSQ

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_5|2397_bp
atggtccggaccctatttgtcagtggccttcctctggatatcaaacctcgggagctctat
ctgcttttcagaccatttaagggctatgagggttctcttataaagctcacatctaaacag
cctgtaggttttgtcagttttgacagtcgctcagaagcagaggctgcaaagaatgctttg
aatggcatccgcttcgatcctgaaattccgcaaacactacgactagagtttgctaaggca
aacacgaagatggccaagaacaaactcgtagggactccaaaccccagtactcctctgccc
aacactgtacctcagttcattgccagagagccatatgagctcacagtgcctgcactttac
cccagtagccctgaagtgtgggccccgtaccctctgtacccagcggagttagcgcctgct
ctacctcctcctgctttcacctatcccgcttcactgcatgcccagcttacgccagcactg
ggagagcttatccaaaagaggggcctccccaaaccaggctggacacggccaccggaaccc
ccttctgacaggaaatacatccggggtggagggggctgggcagctgaatcccagcgacgg
aatggcccttgccctcacgagttactttacacaaacccgctgtccctgacctttccagct
gcagccttatctcactttcctatcggagaaactggagaaagaatcacagtggagaagatt
cccagggtcgtccacgttgccttagatgtcacaggctgtgtgaagtgcttagcgcggtct
ctgacgcagactaaatgtcaggctcggaacccgccttcatgtcactctggagtgcgcctc
gaccaggctgacgagagcctgaagacgggctgcacgctcgtccccaaccctgcaggcacc
tgtgcgagtgagaacgtgagggctgtgtgcgagagctggtcagagaggctggggcagggc
ttccttctcgcagtcacctgcaccgaaagcagaaccatgccatccactgtgcagctctcc
tccccgggcagccctccccctcctgtgtctcctgtgaaacaccgtcacgtcttggcctcg
tcggggctcagcgccccaacccacacccaggccgcaccagtcacaccactgcgctccaca
ctgacccagtgcacacagacccatcaccctctactctggtcatctgatcgctggtcatat
ctggcatggtcgccagaagagacccaatgcacaggcagcctgacggagtcgtggtgcagg
cagaagctccggtatgtcctaagcctgcgtttcctgactcaggccagcgaggaaagaacc
gctcgtgaggaggcccatggggaggaggaggttcccaggccgccttgtgctcggaccagg
gacaagcataaactgaccgttgaggaagttggtgaaactggaagagaggccccttgccaa
gcacatctgagagccaagagtcagcagagaaagagcagcccccagagagtggagagcggg
ctggagaagcagggtgcgccggccacttctgtcagtcagatgcttcaggaaagtcaagca
tgggcctttggacagtcctccgggtctaggccacagcccttgggatgcaaccacagggac
gtgggtgtagagtcctgcttgctgggcctgcagcctcctaatgcgccctcagcgaagagt
tcacatgcttttcttggaatgtccttcctcgctggcccccagaagcctcctcttacttgc
tccgccaagtcctcaaacaggccggtcttcaagaccgaggcagccccaggtggaggttac
tgtgcaccgttaacgggtgatctttctccatcccaggtcccaggtgattctgcccggagc
tctttaacatctgctccaacacggcctgccagggaaggtcatcccaggacagcaactgat
acatttttaaagcccatcaccccagtatttggtgctcaccatgtcctccttagcaagacc
aactacatgtatcccacactgcagacaagacgccagcagatttcattcccattgtcaggc
ttcggcagagctaagcaagcattggccattgagcttaggcacaaagagattaaaggagga
agcagataccggggaaagccagagaatttcaaacggctcacagataaagacagggctgtc
cactcgcagtcccttgaacgctggggctggaaggaacgggatgtcctgcgctgcctttcc
actaagcctctgctcaacagcagagccaccagaaacgggcagaggcgagaacatgacttc
aacttggtgtttctggtggatatgttttcagacacccagaagaactgcgaagagacagct
tctctgtatagcatccctcggagatgctgcagacttggttccaggccatcgcaataa

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_6|111_aa
MKDKCSLRETEMERIHCHQTCTTGNIKGSCSGRREFQKLWRSVTVDSMDEEKIEEYLKRQ
GISSMQESGPKKVAPIQRRKKPASQKKRRFKTHNEHLAGVLKDYSDITSSK

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_6|336_bp
atgaaggacaaatgctctctcagagaaacagaaatggagagaattcattgccatcagacc
tgcactactggaaatattaaaggaagttgttcaggaagaagagaatttcagaaactgtgg
aggagtgtcactgtagattccatggacgaggagaaaattgaagaatatctgaagcgacag
ggtatttcttccatgcaggaatctggaccaaagaaagtggcccctattcagagaaggaaa
aagcctgcttcacagaaaaagcgacgctttaagactcataacgaacacttggctggagtg
ctgaaggattactctgacattacttccagcaaatag

>gi568815590f:30285093_30647420|GENSCAN_predicted_peptide_7|305_aa
XHSNGSFNLKALSGSSGYKFGVLAKIVNYMKGHLEICNNVSYLWILGLIMPMKSLLSCKV
TQPQVDLDVHVFGGRTRHQRGDTHPLTLDEILDETQHLDIGLKQKQWLMTEALVNNPKIE
VIDGKYAFKPKYNVRDKKALLRLLDQHDQRGLGGILLEDIEEALPNSQKAVKALGDQILF
VNRPDKKKILFFNDKSCQFSVDEVTKEDSVCPRPRLNPNVRESSHPYEANSCGLTGDTGD
RCKAQERGGRPAQMQRKRKTKKAEGRTDTEENILWQTSHYPNTVRSWWYIVGNHGSNKFQ
TTLLF

>gi568815590f:30285093_30647420|GENSCAN_predicted_CDS_7|918_bp
natcatagcaatggatcatttaacttgaaagctttgtcaggaagctctggatataagttt
ggtgttcttgctaagattgtgaattacatgaagggacacctggaaatctgcaataatgtc
tcctatctctggatccttggtttaatcatgccaatgaagtcccttttgtcatgcaaggta
acacagccacaggttgatttggatgtgcatgtttttggagggaggacacggcatcagcga
ggagatacgcatcctctaaccttagatgaaattttggatgaaacacaacatttagatatt
ggactcaagcagaaacaatggctaatgactgaggctttagtcaacaatcccaaaattgaa
gtaatagatgggaagtatgctttcaagcccaagtacaacgtgagagataagaaggcccta
cttaggctcttagatcagcatgaccagcgaggattaggaggaattcttttagaagacata
gaagaagcactgcccaattcccagaaagctgtcaaggctttgggggaccagatactattt
gtaaatcgtcccgataagaagaaaatacttttcttcaatgataagagctgtcagttttct
gtggatgaagtcaccaaggaagacagtgtttgcccaagaccaaggcttaatcctaatgtc
agagaatcttcccacccatacgaggctaacagctgtggactgacaggtgacactggagat
cggtgtaaggcgcaagaacgtggaggcagaccagctcagatgcagcgtaaaaggaagacc
aaaaaagctgaaggtcgaacagacactgaggaaaacatcctctggcaaaccagccactac
cctaacacagttcgaagctggtggtacattgtgggtaaccatggcagcaacaaattccaa
accacgcttctgttctga