Result of FASTA (omim) for pF1KB7904
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7904, 328 aa
  1>>>pF1KB7904 328 - 328 aa - 328 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7387+/-0.000448; mu= 13.9776+/- 0.028
 mean_var=74.1653+/-14.518, 0's: 0 Z-trim(110.8): 23  B-trim: 390 in 2/52
 Lambda= 0.148927
 statistics sampled from 19227 (19245) to 19227 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.226), width:  16
 Scan time:  7.410

The best scores are:                                      opt bits E(85289)
NP_852001 (OMIM: 602947) transcription initiation  ( 328) 2139 469.1 5.5e-132
XP_016866858 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_016866859 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_011513251 (OMIM: 602947) PREDICTED: transcripti ( 330) 2047 449.4 4.9e-126
XP_016866862 (OMIM: 602947) PREDICTED: transcripti ( 296) 1840 404.9 1.1e-112
NP_003590 (OMIM: 602947) transcription initiation  ( 317) 1833 403.4 3.3e-112
XP_016866860 (OMIM: 602947) PREDICTED: transcripti ( 317) 1833 403.4 3.3e-112
XP_016866861 (OMIM: 602947) PREDICTED: transcripti ( 317) 1833 403.4 3.3e-112
XP_011513255 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6  3e-106
XP_011513254 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6  3e-106
XP_011513253 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6  3e-106
XP_011513252 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6  3e-106
XP_011513256 (OMIM: 602947) PREDICTED: transcripti ( 319) 1741 383.6  3e-106
XP_016866863 (OMIM: 602947) PREDICTED: transcripti ( 233) 1418 314.1 1.8e-85
NP_001248752 (OMIM: 602947) transcription initiati ( 165) 1093 244.2 1.4e-64


>>NP_852001 (OMIM: 602947) transcription initiation prot  (328 aa)
 initn: 2139 init1: 2139 opt: 2139  Z-score: 2490.5  bits: 469.1 E(85289): 5.5e-132
Smith-Waterman score: 2139; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)

               10        20        30        40        50        60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
              250       260       270       280       290       300

              310       320        
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
       ::::::::::::::::::::::::::::
NP_852 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
              310       320        

>>XP_016866858 (OMIM: 602947) PREDICTED: transcription i  (330 aa)
 initn: 2047 init1: 2047 opt: 2047  Z-score: 2383.7  bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)

               10        20        30        40        50        60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
              250       260       270       280       290       300

              310       320          
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC  
       :::::::::::::::               
XP_016 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
              310       320       330

>>XP_016866859 (OMIM: 602947) PREDICTED: transcription i  (330 aa)
 initn: 2047 init1: 2047 opt: 2047  Z-score: 2383.7  bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)

               10        20        30        40        50        60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
              250       260       270       280       290       300

              310       320          
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC  
       :::::::::::::::               
XP_016 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
              310       320       330

>>XP_011513251 (OMIM: 602947) PREDICTED: transcription i  (330 aa)
 initn: 2047 init1: 2047 opt: 2047  Z-score: 2383.7  bits: 449.4 E(85289): 4.9e-126
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 315 aa overlap (1-315:1-315)

               10        20        30        40        50        60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
              250       260       270       280       290       300

              310       320          
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC  
       :::::::::::::::               
XP_011 IRRYSHRIGPLSPFTETAAEFHEVLWIVLP
              310       320       330

>>XP_016866862 (OMIM: 602947) PREDICTED: transcription i  (296 aa)
 initn: 1840 init1: 1840 opt: 1840  Z-score: 2144.0  bits: 404.9 E(85289): 1.1e-112
Smith-Waterman score: 1848; 90.2% identity (90.2% similar) in 328 aa overlap (1-328:1-296)

               10        20        30        40        50        60
pF1KB7 MVVFGTTFFNFDSFIGKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAV
       ::::::::::::                                ::::::::::::::::
XP_016 MVVFGTTFFNFD--------------------------------RYSLGDARRPLHETAV
               10                                        20        

               70        80        90       100       110       120
pF1KB7 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSK
       30        40        50        60        70        80        

              130       140       150       160       170       180
pF1KB7 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMER
       90       100       110       120       130       140        

              190       200       210       220       230       240
pF1KB7 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETV
      150       160       170       180       190       200        

              250       260       270       280       290       300
pF1KB7 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREA
      210       220       230       240       250       260        

              310       320        
pF1KB7 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
       ::::::::::::::::::::::::::::
XP_016 IRRYSHRIGPLSPFTNAYRRNGMAFLAC
      270       280       290      

>>NP_003590 (OMIM: 602947) transcription initiation prot  (317 aa)
 initn: 1833 init1: 1833 opt: 1833  Z-score: 2135.4  bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)

          20        30        40        50        60        70     
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
                                     ::::::::::::::::::::::::::::::
NP_003 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
           10        20        30        40        50        60    

          80        90       100       110       120       130     
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
          250       260       270       280       290       300    

         320        
pF1KB7 NAYRRNGMAFLAC
       :::::::::::::
NP_003 NAYRRNGMAFLAC
          310       

>>XP_016866860 (OMIM: 602947) PREDICTED: transcription i  (317 aa)
 initn: 1833 init1: 1833 opt: 1833  Z-score: 2135.4  bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)

          20        30        40        50        60        70     
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
                                     ::::::::::::::::::::::::::::::
XP_016 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
           10        20        30        40        50        60    

          80        90       100       110       120       130     
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
          250       260       270       280       290       300    

         320        
pF1KB7 NAYRRNGMAFLAC
       :::::::::::::
XP_016 NAYRRNGMAFLAC
          310       

>>XP_016866861 (OMIM: 602947) PREDICTED: transcription i  (317 aa)
 initn: 1833 init1: 1833 opt: 1833  Z-score: 2135.4  bits: 403.4 E(85289): 3.3e-112
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 283 aa overlap (46-328:35-317)

          20        30        40        50        60        70     
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
                                     ::::::::::::::::::::::::::::::
XP_016 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
           10        20        30        40        50        60    

          80        90       100       110       120       130     
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
          250       260       270       280       290       300    

         320        
pF1KB7 NAYRRNGMAFLAC
       :::::::::::::
XP_016 NAYRRNGMAFLAC
          310       

>>XP_011513255 (OMIM: 602947) PREDICTED: transcription i  (319 aa)
 initn: 1741 init1: 1741 opt: 1741  Z-score: 2028.6  bits: 383.6 E(85289): 3e-106
Smith-Waterman score: 1741; 100.0% identity (100.0% similar) in 270 aa overlap (46-315:35-304)

          20        30        40        50        60        70     
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
                                     ::::::::::::::::::::::::::::::
XP_011 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
           10        20        30        40        50        60    

          80        90       100       110       120       130     
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
          250       260       270       280       290       300    

         320          
pF1KB7 NAYRRNGMAFLAC  
                      
XP_011 ETAAEFHEVLWIVLP
          310         

>>XP_011513254 (OMIM: 602947) PREDICTED: transcription i  (319 aa)
 initn: 1741 init1: 1741 opt: 1741  Z-score: 2028.6  bits: 383.6 E(85289): 3e-106
Smith-Waterman score: 1741; 100.0% identity (100.0% similar) in 270 aa overlap (46-315:35-304)

          20        30        40        50        60        70     
pF1KB7 GKTDSIEIIGKSVFPYCYHNILPLLNDSGRYSLGDARRPLHETAVLVEDVVHTQLINLLQ
                                     ::::::::::::::::::::::::::::::
XP_011 AASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQ
           10        20        30        40        50        60    

          80        90       100       110       120       130     
pF1KB7 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKL
           70        80        90       100       110       120    

         140       150       160       170       180       190     
pF1KB7 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAE
          130       140       150       160       170       180    

         200       210       220       230       240       250     
pF1KB7 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMV
          190       200       210       220       230       240    

         260       270       280       290       300       310     
pF1KB7 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFT
          250       260       270       280       290       300    

         320          
pF1KB7 NAYRRNGMAFLAC  
                      
XP_011 ETAAEFHEVLWIVLP
          310         




328 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 14:34:42 2016 done: Sat Nov  5 14:34:43 2016
 Total Scan time:  7.410 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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