GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:31:52

Sequence gi568815596r:38645136_38850196 : 205061 bp : 44.41% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4591   4598    8  0  2  103   91     0 0.079   2.30
 1.02 Intr +  10233  10298   66  0  0   56   67    85 0.037   1.22
 1.03 Intr +  21044  21216  173  2  2   33   98   158 0.012  10.89
 1.04 Intr +  30777  30931  155  1  2  119  106   137 0.995  18.39
 1.05 Intr +  36145  36351  207  0  0   50  111   241 0.632  21.87
 1.06 Intr +  44678  44759   82  1  1   89   77    50 0.369   3.21
 1.07 Term +  57529  57575   47  2  2  112   50     9 0.063  -3.13
 1.08 PlyA +  58885  58890    6                               1.05

 2.00 Prom +  62503  62542   40                              -7.96
 2.01 Init +  66529  66754  226  0  1   57   97   488 0.997  45.23
 2.02 Intr +  84421  84562  142  2  1   91   77    97 0.976   8.31
 2.03 Intr +  86600  86774  175  2  1  113   95   119 0.999  15.04
 2.04 Term +  88353  88430   78  2  0  100   49    69 0.879   1.96
 2.05 PlyA +  88965  88970    6                               1.05

 3.08 PlyA -  89844  89839    6                               1.05
 3.07 Term -  96823  96724  100  0  1  100   40    34 0.040  -2.60
 3.06 Intr - 105059 104879  181  0  1   51  106   180 0.408  15.03
 3.05 Intr - 106294 106094  201  2  0   76   94   150 0.375  13.66
 3.04 Intr - 120838 120757   82  1  1   38   98    85 0.023   3.71
 3.03 Intr - 133219 133120  100  0  1   59   13    54 0.000  -4.89
 3.02 Intr - 136461 136369   93  2  0   81  106    87 0.010   8.88
 3.01 Init - 136739 136666   74  2  2   46   64    75 0.012   1.44
 3.00 Prom - 140853 140814   40                              -2.26

 4.18 PlyA - 141021 141016    6                               1.05
 4.17 Term - 153307 153164  144  1  0   56   42   126 0.963   2.71
 4.16 Intr - 157780 157580  201  1  0   94  103   184 0.997  19.98
 4.15 Intr - 161558 161424  135  2  0   40   71    87 0.053   2.96
 4.14 Intr - 165655 165420  236  2  2   40   99   292 0.041  22.91
 4.13 Intr - 166255 165927  329  0  2  106   20   392 0.944  29.54
 4.12 Intr - 166591 166320  272  1  2  118  -31   396 0.686  27.04
 4.11 Intr - 168760 168686   75  1  0   89   92    23 0.851   2.51
 4.10 Intr - 170520 170386  135  0  0  100   88    75 0.998   9.46
 4.09 Intr - 174009 173914   96  0  0  121  115    70 0.999  13.21
 4.08 Intr - 174931 174833   99  1  0   20   88    66 0.458   0.11
 4.07 Intr - 178134 177858  277  2  1  120   78    91 0.991   8.82
 4.06 Intr - 180912 180712  201  2  0  132   56    16 0.694   1.20
 4.05 Intr - 181554 181381  174  2  0  106   51   115 0.916   8.65
 4.04 Intr - 183277 183205   73  2  1   64  111    17 0.033   0.06
 4.03 Intr - 192812 192696  117  0  0  115   93    96 0.462  13.24
 4.02 Intr - 198075 197870  206  2  2  106   87   134 0.976  13.94
 4.01 Intr - 201938 201884   55  0  1  127  116    21 0.983   6.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  21027  21216  190  2  1   39   98   179 0.957  13.22
S.002 Term +  71070  71168   99  2  0  109   41    55 0.811   1.03
S.003 Init + 133856 133983  128  1  2   84   89    74 0.877   6.73
S.004 Term + 136382 136757  376  2  1   74   54   208 0.971  10.21
S.005 Term - 165655 165375  281  2  2   40   47   375 0.923  24.21
S.006 Init - 183260 183205   56  2  2   57  111    11 0.928   1.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:38645136_38850196|GENSCAN_predicted_peptide_1|245_aa
MPRNCLCYDPIQNKVNLVNECLPHLAVFGELPSGGGTVEKFQLQSDLLRVDIISWGCTIT
ALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINK
EPNSLHGGVRGFDKVLWTPRVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNY
RAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTELAQIIHQDL
VTDPK

>gi568815596r:38645136_38850196|GENSCAN_predicted_CDS_1|738_bp
atgcccaggaactgcctctgctacgaccccattcagaacaaagttaatctggtcaatgag
tgtctcccccacctggccgtgtttggagagctgccctcgggaggagggacagtggagaag
ttccagctgcagtcagacctcttgagagtggacatcatctcctggggctgcacgatcaca
gccctagaggtcaaagacaggcaggggagagcctcggacgtggtgcttggcttcgccgag
ttggaaggatacctccaaaagcagccatactttggagcagttattgggagggtggccaac
cgaatcgccaaaggaaccttcaaggtggatgggaaggagtatcacctggccattaacaag
gaacccaacagtctgcatggaggagtcagagggtttgataaagtgctctggacccctcgg
gtgctgtcaaatggcgtccagttctcgcgcatcagtccagatggtgaagaaggctacccc
ggagagttaaaagtctgggtgacatacaccctggatggcggagagctcatagtcaactac
agagcacaagccagtcaggccacaccagtcaacctgaccaaccattcttacttcaacctg
gcaggccaggcttccccaaatataaatgaccatgaagtcaccatagaagcggatacttat
ttgcctgtggatgaaaccctgattcctacagagcttgctcagataatccatcaggattta
gtcacagatccaaagtag

>gi568815596r:38645136_38850196|GENSCAN_predicted_peptide_2|206_aa
MISTVCYLSPSPSSSSITITINTIIINITITITTIITITVTTITITITIIIITITTIITI
ITTTIIIIINIITILREVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGSKEKHF
CARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVN
QPRFPPVLLRPGEEYDHTTWFKFSVA

>gi568815596r:38645136_38850196|GENSCAN_predicted_CDS_2|621_bp
atgattagcactgtgtgttatctgtcaccatcaccatcatcatcatccatcaccatcact
atcaacaccatcatcattaacatcaccatcactatcaccaccattatcaccatcactgtc
accaccatcaccatcaccatcaccatcatcatcatcactatcaccaccatcatcaccatc
atcaccaccaccatcatcatcatcatcaacatcatcactatcttaagagaagttgcccca
gtgcaaggcactgcattcgacctgagaaagccagtggagcttggaaaacacctgcaggac
ttccatctcaatggttttgaccacaatttctgtctgaagggatctaaagaaaagcatttt
tgtgcaagggtgcatcatgctgcaagcgggcgggtactagaagtatacaccacccagccc
ggggtccagttttacacgggcaacttcctggatggcacattaaagggcaagaatggagct
gtctatcccaagcactccggtttctgcctggagactcagaactggcctgatgcagtcaat
cagccccgcttccctcctgtgctgctgaggcctggtgaggagtatgaccacaccacctgg
ttcaagttttctgtggcttaa

>gi568815596r:38645136_38850196|GENSCAN_predicted_peptide_3|276_aa
MSFNKILNTRQNNLIRAAAIFWTICFNSLHSMSHNSGHRHAAIFKEVHKDNTLEENHTIP
NTVLKTKWYLTFNPDKREKYQLKNSSQLWPQVNTEIVQNVTGPGQRTIMGCFGYKQEQRD
DACAKRSGRIYKREPGLFLVVPPGLLAGEGVCQLLRHSSPGRCLLKSRARGSVIMSRYGR
YGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG
LDGKQYLPAPGLDMCLQLYNFQNNFISGDLGYQDYL

>gi568815596r:38645136_38850196|GENSCAN_predicted_CDS_3|831_bp
atgtccttcaataagatcctgaacacgcgacagaataatctcattagagctgctgcaatt
ttctggaccatatgtttcaacagtctgcacagcatgtcccataattccggtcacagacat
gctgccatcttcaaggaagttcacaaggacaatactttggaggaaaaccacacgatacct
aacactgtactaaaaaccaaatggtacttaacgtttaaccctgacaaacgagaaaaatac
cagttaaaaaactcctcgcaactctggccacaagtgaacacagaaatagtccagaatgta
acaggtccagggcaaagaaccatcatgggctgttttggttacaagcaagaacaacgagat
gacgcatgcgcaaagcgcagcggccgcatatataaacgcgaacccgggctcttcctcgta
gtgccgccgggactcttggcgggtgaaggtgtgtgtcagcttttgcgtcactcgagccct
gggcgctgcttgctaaagagccgagcacgcgggtctgtcatcatgtcgcgttacgggcgg
tacggaggagaaaccaaggtgtatgttggtaacctgggaactggcgctggcaaaggagag
ttagaaagggctttcagttattatggtcctttaagaactgtatggattgcgagaaatcct
ccaggatttgcctttgtggaattcgaagatcctagagatgcagaagatgcagtacgagga
ctggatggaaaacaatatttgccagcccctggtttagatatgtgtcttcaactttacaac
tttcaaaacaattttatctctggagatcttgggtaccaagattatttgtag

>gi568815596r:38645136_38850196|GENSCAN_predicted_peptide_4|941_aa
XRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSL
HLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDG
KHSYPPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKI
IISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVA
SGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPH
TDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAA
SLAFKSPFGIGLDCHEKLLQLMLIPLEPEKVEKYYYWINESVSPWDKKEEANQKKLEFAF
ANSDYLALLQAYKEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDATGEEAN
SNAENPKLISAMLCAALYPNVVQAPSGSLSHEDRFQAPGIAPPIPDAMFSKGSMVLAYSA
GLDTSCILVWLKEQGYDIIAYLANVGQKEDFKEARKKALNLGSKKVFIEDVSKEPYITRK
QVEIAQWEGAKYVSHSAMGKGNDQVWFELACYSLAPQIKVIAPGRIPEFYNQSKGRSDLM
EYAEKHGIPIPVTLKHPWNMDENLMHISHEAGILENPKNQPPSDIEGFAMEQEVRKIKQG
LGLKFAELVYTGFWHNPQCDFAHHCIAKSQDRVEGKVQVSIFKGQVYILCQEPPLSLYSG
EQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHE
KIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVK
ELRCELDQLLQDKIKNPSIDLCTCPRGSRIISTIVKLVTTQ

>gi568815596r:38645136_38850196|GENSCAN_predicted_CDS_4|2826_bp
ngtcgtacatttcctgttgatcaattttttttggaagatgcaattgctgtgacaaggtat
gtattacaggatgggagcccatatatgcggtccatgaaacagatttcaaaggaaaagctt
aaagcaaggcggaacagaactgcatttgaagaagtggaagaagacctaaggctctccctt
cacctccaggatcaggattctgtcaaagatgcagtgccagatcaacagttagattttaag
cagctcctggcccgctataaaggggttagcaagtcagtcatcaaaacaatgtccatcatg
gattttgaaaaggtgaatcttgaattaatagaggccttattagagtggattgtggatgga
aagcactcctaccctccaggactagcagaaatcaaaatgctttatgaacagctacagtct
aattctcttttcaacaacagacgtagtaatcgatgtgttattcacccacttcattcatct
ttatccagtgaagagcagcaggctgtgtttgtaaaacctcctgcaggagtaactaagatt
ataatttccaccaacattgctgagacatccataaccatcgatgatgttgtctatgttatc
gattctgggaaaatgaaagaaaagagatatgatgccagcaaagggatggaaagtctagag
gacacctttgtatctcaagctaatgctctacaaaggaaaggccgagcaggccgtgttgca
tctggggtctgcttccatttattcactagccatcactacaatcaccagcttttaaaacaa
cagctaccagaaatacaaagagtgccattggaacagctgtgtctaagaattaaaatttta
gagatgtttagtgctcataatctccagtctgtgttctctcggctcattgaacctccacac
accgattctcttcgtgcctcaaaaatacgattacgagacttaggagcattaactccagat
gaaagattgacccctcttgggtatcatttggcctctctgcccgtggatgtgagaattggc
aaactaatgttgtttgggtctatcttccgctgtttggatcctgctctcaccattgctgcc
agtttggcttttaagtctccgtttggcattggtttagattgccatgagaaactactgcag
ctcatgctgatacctttagagcctgagaaggtagagaaatattattattggattaatgaa
tcggtatctccctgggataaaaaagaagaagctaaccagaaaaagctggaatttgcattc
gcaaacagtgattatctggcccttctacaagcgtataaggaaatggccagcctcaaacga
caattcacggaactgttatcggatatagggtttgcaagggaagggctcagagcaagggaa
attgagaaaagggcccaaggaggagatggtgtcttagatgccacaggagaagaggcaaac
tcaaatgctgagaaccccaagctgatatcagcaatgctgtgtgctgctttgtatccaaat
gtagtgcaggccccgagtggttcactgagccatgaagacagattccaggcaccaggaatt
gcacctccaatcccagatgctatgttcagcaaaggctccatggttctggcctacagtgcc
ggcctggacacctcctgcatcctcgtgtggctgaaggaacaaggctatgacattattgcc
tacctggccaatgttggccagaaggaagacttcaaggaagccaggaagaaggcactgaac
cttgggtccaaaaaggtgttcattgaggacgtcagcaaggagccttacatcacccgcaaa
caagtggaaattgctcagtgggagggggcaaagtatgtgtcccacagtgccatgggaaag
gggaacgatcaggtctggtttgagctcgcctgctactcgctggccccccagattaaggtc
attgctcccgggaggatccctgagttctacaaccagtccaagggccgcagtgatctgatg
gaatatgcagagaaacatgggattcccatcccagtcactctgaagcacccatggaacatg
gacgagaacctcatgcacatcagccacgaggctggaatcttggagaaccccaagaaccaa
ccaccttcagacattgagggctttgccatggaacaggaagtgcgcaaaatcaaacaaggc
ctgggcttgaaatttgctgagttggtgtacaccggtttctggcacaaccctcagtgtgac
tttgcccaccactgcattgccaagtcccaggaccgagtggaagggaaagtgcaggtatcc
atcttcaagggccaggtgtacatcctctgccaggagcccccactgtctctctacagtgga
gagcaggtgaaaagcccagaaggaaaatttcagaagaccagtactggagctgtcagaatg
caaccaaaatcagctgagttgaagtttgtcaccaagaacgatggatatgtacacattcac
ccttcatcagtgaactatcaggtgagacactttgacagcccctacctgttgtaccacgag
aagataaaaactagtcgagtattcatccgagactgcagcatggtgtctgtgtacccgctg
gtcttgtttggaggaggccaagtgaatgtgcagcttcaaagaggagagttcgttgtctcc
ctggatgatggttggatccgttttgtagctgcttcccatcaggtggctgaactggtaaag
gagcttcgttgcgaacttgatcagcttctccaggataaaattaaaaacccaagcattgat
ctgtgtacgtgtcctcgaggatcccggatcatcagcacaattgtgaaacttgtcaccaca
caataa