Result of FASTA (ccds) for pF1KB6228
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6228, 740 aa
  1>>>pF1KB6228 740 - 740 aa - 740 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.2177+/-0.000978; mu= -0.2933+/- 0.059
 mean_var=340.1192+/-68.862, 0's: 0 Z-trim(115.6): 22  B-trim: 440 in 1/54
 Lambda= 0.069544
 statistics sampled from 16174 (16195) to 16174 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.497), width:  16
 Scan time:  5.100

The best scores are:                                      opt bits E(32554)
CCDS4776.1 DAXX gene_id:1616|Hs108|chr6            ( 740) 4869 502.7 8.6e-142
CCDS59008.1 DAXX gene_id:1616|Hs108|chr6           ( 665) 4365 452.1 1.3e-126


>>CCDS4776.1 DAXX gene_id:1616|Hs108|chr6                 (740 aa)
 initn: 4869 init1: 4869 opt: 4869  Z-score: 2659.1  bits: 502.7 E(32554): 8.6e-142
Smith-Waterman score: 4869; 100.0% identity (100.0% similar) in 740 aa overlap (1-740:1-740)

               10        20        30        40        50        60
pF1KB6 MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEFCNILSRVLSRARSRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEFCNILSRVLSRARSRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 AKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 ELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAARH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAARH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 SLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 LRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB6 GMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB6 DEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB6 SSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTV
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB6 LENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNG
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB6 KKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPARLSQTPHSQPPRPGTC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPARLSQTPHSQPPRPGTC
              670       680       690       700       710       720

              730       740
pF1KB6 KTSVATQCDPEEIIVLSDSD
       ::::::::::::::::::::
CCDS47 KTSVATQCDPEEIIVLSDSD
              730       740

>>CCDS59008.1 DAXX gene_id:1616|Hs108|chr6                (665 aa)
 initn: 4365 init1: 4365 opt: 4365  Z-score: 2386.4  bits: 452.1 E(32554): 1.3e-126
Smith-Waterman score: 4365; 100.0% identity (100.0% similar) in 665 aa overlap (76-740:1-665)

          50        60        70        80        90       100     
pF1KB6 GARGSSSSGGKKCYKLENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEF
                                     ::::::::::::::::::::::::::::::
CCDS59                               MQTADHPEVVPFLYNRQQRAHSLFLASAEF
                                             10        20        30

         110       120       130       140       150       160     
pF1KB6 CNILSRVLSRARSRPAKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CNILSRVLSRARSRPAKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLS
               40        50        60        70        80        90

         170       180       190       200       210       220     
pF1KB6 LDPTNAENTASQSPRTRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LDPTNAENTASQSPRTRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQE
              100       110       120       130       140       150

         230       240       250       260       270       280     
pF1KB6 ARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPD
              160       170       180       190       200       210

         290       300       310       320       330       340     
pF1KB6 YGDVLRAVEKAAARHSLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YGDVLRAVEKAAARHSLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYR
              220       230       240       250       260       270

         350       360       370       380       390       400     
pF1KB6 PGVDPALSDPVLARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PGVDPALSDPVLARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHS
              280       290       300       310       320       330

         410       420       430       440       450       460     
pF1KB6 ADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEE
              340       350       360       370       380       390

         470       480       490       500       510       520     
pF1KB6 DLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKG
              400       410       420       430       440       450

         530       540       550       560       570       580     
pF1KB6 RIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETD
              460       470       480       490       500       510

         590       600       610       620       630       640     
pF1KB6 ISSSRKQSEEPFTTVLENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ISSSRKQSEEPFTTVLENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLG
              520       530       540       550       560       570

         650       660       670       680       690       700     
pF1KB6 NSYVERQRSVHEKNGKKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NSYVERQRSVHEKNGKKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPAR
              580       590       600       610       620       630

         710       720       730       740
pF1KB6 LSQTPHSQPPRPGTCKTSVATQCDPEEIIVLSDSD
       :::::::::::::::::::::::::::::::::::
CCDS59 LSQTPHSQPPRPGTCKTSVATQCDPEEIIVLSDSD
              640       650       660     




740 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 14:17:56 2016 done: Sat Nov  5 14:17:57 2016
 Total Scan time:  5.100 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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