GENSCAN 1.0	Date run:  5-Nov-116	Time: 14:03:59

Sequence gi568815583f:45487444_45706511 : 219068 bp : 42.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -    189     84  106  0  1   73  116    -1 0.015   0.07
 1.03 Intr -   1524   1398  127  2  1   78   85    49 0.032   3.36
 1.02 Intr -   3438   3285  154  1  1   82   75    51 0.017   1.41
 1.01 Init -  34911  34521  391  0  1   85   95   439 0.606  41.28
 1.00 Prom -  47472  47433   40                              -4.85

 2.00 Prom +  57009  57048   40                              -5.75
 2.01 Init +  59870  59973  104  1  2   75   89    95 0.620   8.06
 2.02 Intr +  68030  68492  463  2  1   61   28   289 0.069  12.43
 2.03 Intr +  77263  77420  158  0  2   93   36   111 0.182   4.29
 2.04 Intr +  77991  78184  194  0  2   42   87    58 0.141  -0.69
 2.05 Term +  79449  79633  185  1  2  -27   45   196 0.232   0.52
 2.06 PlyA +  79723  79728    6                               1.05

 3.00 Prom +  80218  80257   40                              -6.45
 3.01 Init +  86383  86461   79  0  1   43   89    86 0.508   5.47
 3.02 Intr +  87228  87312   85  1  1   83   59    59 0.086   0.46
 3.03 Intr +  99657 100082  426  0  0   31   92   342 0.172  20.88
 3.04 Intr + 100253 100353  101  2  2   26  104    11 0.637  -4.67
 3.05 Intr + 104692 104833  142  2  1   59   87   151 0.835  10.59
 3.06 Term + 107613 107721  109  0  1   83   53    61 0.779  -0.90
 3.07 PlyA + 108183 108188    6                               1.05

 4.00 Prom + 110191 110230   40                              -4.35
 4.01 Sngl + 110663 112084 1422  1  0   16   47   419 0.717  26.23
 4.02 PlyA + 112120 112125    6                              -0.45

 5.00 Prom + 112413 112452   40                              -3.45
 5.01 Init + 118036 118071   36  0  0   56   87     8 0.239  -2.44
 5.02 Term + 118952 119071  120  1  0   68   48   165 0.986   7.99
 5.03 PlyA + 121417 121422    6                               1.05

 6.00 Prom + 130088 130127   40                              -4.35
 6.01 Init + 131721 131857  137  2  2   55   66   100 0.553   4.16
 6.02 Intr + 133752 133899  148  0  1   83   34    96 0.477   3.02
 6.03 Intr + 134042 134127   86  1  2   31  115    63 0.466   1.00
 6.04 Term + 134282 134390  109  2  1   50   42   101 0.439  -1.30
 6.05 PlyA + 135038 135043    6                               1.05

 7.00 Prom + 137374 137413   40                              -3.65
 7.01 Init + 147009 147176  168  2  0   73   97   165 0.867  15.56
 7.02 Intr + 158718 158818  101  2  2   50   56    94 0.013   0.39
 7.03 Intr + 161155 161310  156  1  0   22   72   166 0.066   6.60
 7.04 Intr + 171543 171714  172  0  1   66   99   121 0.092  10.02
 7.05 Intr + 174512 174682  171  1  0   56   86   168 0.979  12.62
 7.06 Intr + 182485 182538   54  0  0  109   81    50 0.932   4.66
 7.07 Intr + 184576 184707  132  0  0   67   36    92 0.683   1.82
 7.08 Intr + 186164 186358  195  1  0  100   91   125 0.992  12.69
 7.09 Intr + 188658 188867  210  2  0   69   70   293 0.959  23.79
 7.10 Intr + 195035 195218  184  1  1   57   97   128 0.946   9.04
 7.11 Intr + 196084 196199  116  2  2   74   69    46 0.731   0.55
 7.12 Intr + 201596 201774  179  1  2   11  115   171 0.915   9.90
 7.13 Intr + 203462 203501   40  2  1   81   88   -34 0.513  -6.79
 7.14 Intr + 205877 205945   69  1  0  114  115    59 0.761   9.66
 7.15 Intr + 208757 208823   67  1  1   95   64   123 0.570   8.16
 7.16 Term + 216836 217023  188  0  2   74   43   125 0.177   3.27
 7.17 PlyA + 217800 217805    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 144433 144071  363  1  0   43   37   236 0.993   9.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_1|260_aa
MAGSGAWKRLKSMLRKDDAPLFLNDTSAFDFSDEAGDEGLSRFNKLRVVVADDGSEAPER
PVNGAHPTLQADDDSLLDQDLPLTNSQLSLKVDSCDNCSKQREILKQRKVKARLTIAAVL
YLLFMIGELVEVLSAMISVLLVYILMGFLLYEAVQRTIHMNYEINGDIMLITAAVGVAVN
VIGSGCERNHGQDSLAVRAAFVHALGDLVQSVGVLIAAYIIRFKPEYKIADPICTYVFSL
LVAFTTFRIIWDTVVIILEX

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_1|780_bp
atggccggctctggcgcgtggaagcgcctcaaatctatgctaaggaaggatgatgcgccg
ctgtttttaaatgacaccagcgcctttgacttctcggatgaggcgggggacgaggggctt
tctcggttcaacaaacttcgagttgtggtggccgatgacggttccgaagccccggaaagg
cctgttaacggggcgcacccgaccctccaggccgacgatgattccttactggaccaagac
ttacctttgaccaacagtcagctgagtttgaaggtggactcctgtgacaactgcagcaaa
cagagagagatactgaagcagagaaaggtgaaagccaggttgaccattgctgccgttctg
tacttgcttttcatgattggagaacttgtagaggttttgtcagctatgattagtgtgctg
ttggtgtatatacttatgggattcctcttatatgaagctgtgcaaagaactatccatatg
aactatgaaataaatggagatataatgctcatcaccgcagctgttggagttgcagttaat
gtaataggttctgggtgtgaacgtaaccatgggcaggatagcctggcagtgagagctgca
tttgtacatgctttgggagatttggtacagagtgttggtgtgctaatagctgcatacatc
atacgattcaagccagaatacaagattgctgaccccatctgtacatacgtattttcatta
cttgtggcttttacaacatttcgaatcatatgggatacagtagttataatactagaagnn

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_2|367_aa
MRASLDQKRRGHPAGSGGGEVNGRSAMAANSSGGCALDFADESGSVSCKDMHLLLWLQKR
IEMHKAEQCEEEEAMTPRPTKARAPLPSAYVPPLSLPPCPRERLKGMLKEIKPRLSRNCR
EDPQGCLLNLLLQSHSRSPERPLQRRERRYLQRRREKLMLARRGITLQKMEMPKQTRHRK
LKVLEMPSEHPIKASSLELLIVSVIDIPYSEQQDLDRTLGVSVTSSQPSGKHSHKLSNCN
TGWGLVGGDLMWVVSHGLAPSPVLSHDRVLMRPDVLKVCGSSPLVLSPSCPAMLRLACFF
FTFRHDLGSQIPYTEQVSKAMLELKALKSSDLTEVVVYGSYLYKLWTKWMLQSVAEWFQL
GLNSAPV

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_2|1104_bp
atgcgtgcctcgctggatcagaaacgcagaggacaccctgccggatctggagggggggaa
gtcaatggcaggtctgcgatggcagcgaacagcagtggtggatgtgcacttgattttgca
gatgagtctggaagtgttagttgcaaagatatgcatttacttctctggctacaaaaaaga
atagaaatgcacaaagcagagcagtgtgaagaagaagaggcgatgacccctagaccgacc
aaagcccgtgctccactgcccagtgcctatgtcccaccactgtcgctgccaccctgcccg
agagaaaggctgaaggggatgctaaaggagataaaaccaaggttaagtaggaactgcaga
gaagatccacaaggttgtctgctaaacctgctcctccaaagccacagccgaagcccagaa
aggcctctgcaaagaagagagagaaggtacctacagagaagaagggaaaagctgatgctg
gcaaggaggggaataaccctgcagaaaatggagatgccaaaacagactaggcacagaaag
ctaaaggtgctggagatgccaagtgaacacccaattaaagcctcttccctggaactactc
attgtctcagtgattgacattccatacagtgagcaacaggacctagaccgaacccttggc
gtttctgtaacaagttcacaaccaagtgggaaacatagccacaaacttagtaactgtaat
acagggtggggcctggtgggaggcgatttgatgtgggtggtttctcatggtttagcacca
tccccagtgctgtctcatgatagagttctcatgagacctgatgttttaaaagtgtgtggc
agttccccacttgttctgtctccttcctgccctgccatgttaaggcttgcctgcttcttc
ttcaccttccgccatgatttagggtcacagatcccttacactgagcaggtgagtaaggcc
atgcttgagttgaaggctctgaaatcttcagacctcactgaggtcgtggtttatggctcc
tatttgtacaagctctggaccaagtggatgctgcagtccgtggctgagtggttccagctt
ggtttaaactctgctccagtctga

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_3|313_aa
MYADKWRVSKTKKNFTEGQNSSEETRGTTQCLPAVAGILAMATLDESLLLSFLWRQRSSG
LRDPPREQPKPTTVLPQLPPIGSQGLEPHTAESADTASGARRRYQRGVPTTPWGRANSRA
RDRSPQFFRPRHFRVRQSLLSGQPLESLGAALLLTSHTFASSLCSQLEGHECPWAVVSGR
GPDTATLLPGGRGADACAMGGTEVPRGSFVLGVQLKAVDGEAILSLCVDSGLSDTSPDEG
LIEDLTIEDKAVEQLAEGLLSHYLPDLQRSKQALQELTERKPPLPAHQCVQQLGVRGCSE
PWSCHCALAWVTE

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_3|942_bp
atgtatgcagacaagtggagggtgagcaagacgaagaagaactttactgagggtcagaac
agctcagaggagacccgcggaactacccagtgcctccctgctgtagctggcatcttggca
atggccactttagatgagtcgctgctgctatcatttctatggagacaacgctcttccggt
cttcgtgacccaccccgtgagcagcccaaaccgaccaccgtcctcccccagctcccacca
atcggatcgcagggactcgagccccacactgctgagtccgctgacactgcgtccggggcc
agacgacgatatcagcgcggggtccccacaacgccatggggcagagccaactctcgagcg
cgtgatcgaagcccgcagttttttcgcccccgtcacttccgggtgcgacaatctcttctg
tccggccagccgctggagtcgttaggtgccgccttgcttctgacgagccacacgtttgct
tcttccctgtgttcccagctggagggacatgagtgtccctgggccgtcgtctccggacgg
ggccctgacacggccaccctactgcctggaggccggggagccgacgcctgcgcaatgggc
ggaactgaagtcccgaggggaagctttgtattgggggtgcaattgaaggcggttgatggt
gaagccattctgagtttatgtgttgactccggtttaagtgacacttctccagatgaaggg
ttaatagaggacttgactatagaagacaaagcagtggagcaactggcagaaggattgctt
tctcattatttgccagatctgcagagatcaaaacaagccctccaggaactcactgagagg
aaacccccgctgccagcacatcagtgtgttcagcagcttggtgttcgaggctgcagtgaa
ccatggtcatgccactgtgccctagcctgggtgacagagtga

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_4|473_aa
MQKAFDKIQQPFMLKTLNKLGIDGTYFKIIAIYDKPTANIILNGQKLEAFPLKTGTRQGC
PLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKL
ISNFSKVSGYKINVQKSQAFLYPNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLF
KENYKPLLKEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMTFFTELE
KTTLKFIWNQKRACIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDINQWNR
TEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINS
RWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCT
AKETTIRVNRQPTTWEKIFATYSSDKGLIPRIYNELKQIYKKKTTPSKSGRRT

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_4|1422_bp
atgcaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaataaatta
ggtattgatgggacgtatttcaaaataatagctatctatgacaaacccacagccaatatc
atactgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgc
cctctctcaccgctcctattcaacatagtgttggaagttctggccagggcaatcaggcag
gagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgca
gacgacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattc
ttataccccaacaacagacaaacagagagccaaatcatgagtgaactcccattcacaatt
gcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttc
aaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaac
attccatgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaaggta
atttacagattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaa
aaaactactttaaagttcatatggaaccaaaaaagagcctgcatcgccaagtcaatccta
agccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggct
acagtaaccaaaacagcatggtactggtaccaaaacagagatataaatcaatggaacaga
acagagccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgag
aaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggcta
gccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattca
agatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaaccta
ggcattaccattcaggacataggcatgggcaaggacttcatgtccaaaacaccaaaagca
atggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcaca
gcaaaagaaactaccatcagagtgaacaggcaacctacaacatgggagaaaattttcgca
acctactcatctgacaaagggctaatacccagaatctacaatgaactcaaacaaatttac
aagaaaaaaacaaccccatcaaaaagtgggcgaaggacatga

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_5|51_aa
MLMLHEKTSKLKKRALKLQQKRQKEELEREQQREKEFEREKQLTARPAKRM

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_5|156_bp
atgctgatgcttcatgaaaaaacatcaaagttaaaaaaaagagcacttaaactgcagcag
aagaggcaaaaagaagagttggaaagggagcagcaacgagagaaggagtttgaaagagaa
aagcagttaactgccagaccagccaaaaggatgtga

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_6|159_aa
MLLASITGSTNCSGKGLNILDFASHTLFVATAQLSCCSTKATIDDMLCMIGGPDSQREHT
LARDIIKVPLNYKLWLLTGCFVLFVFRHQQAREELIDAATSALEEYDYREFRPLRNESLG
YTTSCPLGRKAHEDYGVAAPCTCVEKYIYTAQGVDCGGH

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_6|480_bp
atgcttttagcatctataacgggatcaacaaactgttcaggtaaagggctaaatatttta
gactttgcaagtcatacactctttgtggcaactgctcagctcagctgttgtagcacaaaa
gcaaccatagacgatatgctctgcatgattggaggtcctgattctcaaagggaacacact
cttgccagggatataataaaggtgccactgaactataagttgtggctgctgacagggtgc
tttgtactttttgtgttcaggcaccagcaggcaagagaggagctgatagacgcggcaacc
tcagccttagaagagtatgattatcgtgagttcagacccctcaggaatgaaagtttgggt
tacaccaccagttgccccttaggaaggaaggcccatgaggactatggagtagctgctcct
tgcacctgtgtggagaagtacatctatacggctcaaggggtagattgtggtggccattag

>gi568815583f:45487444_45706511|GENSCAN_predicted_peptide_7|733_aa
MNMGWDTVEASGWKPAYPCLRVLKEGLQRTPKLNLGHLLCEMSAGIPVFLGSCVNPRPAP
LGDSMWGHPEMQDSSVLPYRSREAIPGAGRKPKWEDLVEEEEEFSNSPSTWAPGVSLTCA
VYTVLIRALRQEATEIQTNSSQLGTQQVGPLQLHTGASHAARNHYEVLVLGGGSGGITMA
ARMKRKVGAENVAIVEPSERHFYQPIWTLVGAGAKQLSSSGRPTASVIPSGVEWIKARVT
ELNPDKNCIHTDDDEKISYRYLIIALGIQLDYEKVFLKGAWLPLYGNFSINDSFLKLEKT
NEGDKTSTACFCLFISWIIKGLPEGFAHPKIGSNYSVKTVEKTWKALQDFKEGNAIFTFP
NTPVKCAGAPQKIMYLSEAYFRKTGKRSKANIIFNTSLGAIFGVKKYADALQEIIQERNL
TVNYKKNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGW
VDVDKETLQHRRYPNVFGIGDCTNLPTSKTAAAVGTVFSGCYKTQDLQYGHVLCELDTCG
TDCVTFADYFNLKYDGYTSCPLVTGYNRVILAEFDYKAEPLETFPFDQSKERLSMYLMKA
DLMPFLYWNMMLSILLTEVAPSLLLQGLGRLGDNPVGTLSLDVDKSAGKTFSTGKFPVLQ
IRQCRVVGKSAGLVSGFCDRTVQVMVRGEGARKRLARSWSPGCGRPLRAAKPEGSRSFLA
FYRPCLETLGLTS

>gi568815583f:45487444_45706511|GENSCAN_predicted_CDS_7|2202_bp
atgaatatgggatgggacactgtggaggccagtggctggaagccagcttacccctgcctg
cgcgttttgaaggaagggctccagcgcacaccaaagctgaacctcggtcaccttctctgt
gaaatgagcgcgggaatacctgtgtttctgggcagctgtgtgaacccgaggccggcccct
ctaggagacagcatgtggggccacccagagatgcaggactcttctgttctgccctatcgc
agcagagaggccatccctggagctggaagaaagcccaagtgggaggatttagttgaggag
gaggaggagttttccaacagtccctccacctgggcaccaggtgtaagcctgacctgtgcc
gtgtacacagtgctcattcgtgccctgagacaggaagctacagagatccagaccaacagc
tcacagctgggcactcagcaggtcggcccccttcagctgcacaccggggccagccatgcg
gccaggaaccattatgaggtgctggtgctgggtgggggcagtggcggaatcaccatggct
gcccgcatgaagaggaaagtgggtgcagagaatgtggccattgttgagcccagtgagaga
catttctaccagccaatctggacactggtgggtgctggtgccaaacaattgtcctcatct
ggtcgtcccacggcaagtgtgattccatctggtgtagaatggatcaaagctagagtgact
gagttgaacccagacaagaactgcattcacacagatgacgacgagaagatctcctaccga
tatcttattattgctctcggaatccagctggactatgagaaggttttcctgaaaggagct
tggttaccactttacggcaacttttccatcaacgacagcttcttaaaactagagaaaact
aatgaaggtgataagacatcaactgcttgtttctgcttgtttatctcttggataattaaa
ggcctacctgaaggtttcgctcatcccaaaatagggtcgaattattcagttaagactgta
gagaagacatggaaagctctgcaggacttcaaagagggcaatgccatcttcaccttccca
aatactccagtgaagtgtgctggagcccctcagaagatcatgtacttatcagaagcctac
ttcaggaagacagggaagcgatccaaggccaatatcattttcaacacttctcttggagcc
attttcggggttaagaagtatgcagatgccctgcaggagatcatccaggagcggaacctc
actgttaactacaagaaaaacctcattgaagtccgagccgataaacaagaggctgtattt
gagaacctggacaaaccaggagagacccaagtgatttcatatgaaatgcttcatgtcaca
cctccaatgagcccaccagatgtcctcaagaccagtcctgtggctgatgctgctggttgg
gtggatgtggataaagaaactctgcaacacaggaggtacccaaatgtgtttgggattggg
gactgcaccaaccttcctacgtcaaagaccgctgctgcagtaggaactgtcttctctgga
tgctataaaacacaagaccttcagtatggtcatgttttgtgtgaattagacacctgtgga
acagattgtgttacttttgctgactatttcaacctcaagtatgatggctacacatcatgt
ccactggtgaccggctacaaccgtgtgattcttgctgagtttgactacaaagcagagccg
ctagaaaccttcccctttgatcaaagcaaagagcgcctttccatgtatctcatgaaagct
gacctgatgcctttcctgtattggaatatgatgctaagcatcctcctgactgaagtcgcc
ccatctctcttgctgcagggtctaggaaggcttggggataatccagttgggactctctcc
ctggatgtagacaaaagtgctggcaagactttcagcactgggaaattcccagtgttacag
attcgccaatgtcgggtagtgggtaaaagtgcagggcttgtcagtgggttctgtgacaga
accgtgcaagtaatggtacgcggagagggcgcgcgaaagcgcctggctcgttcctggagc
ccgggctgcggacgccccctgcgtgctgcgaaacctgaggggtctcggtccttcctggcc
ttttataggccgtgcctagaaacgcttggcttgaccagttag