Result of FASTA (omim) for pF1KB9387
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9387, 288 aa
  1>>>pF1KB9387 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7578+/-0.00052; mu= 5.6926+/- 0.032
 mean_var=205.1407+/-40.743, 0's: 0 Z-trim(113.0): 86  B-trim: 311 in 1/56
 Lambda= 0.089546
 statistics sampled from 22053 (22131) to 22053 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.259), width:  16
 Scan time:  7.170

The best scores are:                                      opt bits E(85289)
NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo  ( 288) 1815 247.2 2.8e-65
XP_016878382 (OMIM: 601485,616172) PREDICTED: synt ( 282) 1752 239.0 7.6e-63
NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Ho ( 288) 1543 212.0   1e-54
NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Hom ( 287) 1202 168.0 1.9e-41
NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Hom ( 288) 1196 167.2 3.3e-41
NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2  ( 251) 1184 165.6 8.7e-41
XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A ( 329) 1184 165.7   1e-40
XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2  ( 319) 1173 164.3 2.7e-40
XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2  ( 320) 1167 163.5 4.7e-40
XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2  ( 320) 1167 163.5 4.7e-40
XP_005253614 (OMIM: 132350) PREDICTED: syntaxin-2  ( 277) 1146 160.7 2.8e-39
XP_005274255 (OMIM: 600876) PREDICTED: syntaxin-3  ( 287) 1130 158.7 1.2e-38
XP_016874471 (OMIM: 132350) PREDICTED: syntaxin-2  ( 309) 1117 157.0   4e-38
XP_016874470 (OMIM: 132350) PREDICTED: syntaxin-2  ( 317) 1113 156.5 5.9e-38
XP_016874472 (OMIM: 132350) PREDICTED: syntaxin-2  ( 260) 1108 155.8   8e-38
XP_016873681 (OMIM: 600876) PREDICTED: syntaxin-3  ( 279) 1106 155.6   1e-37
XP_016873682 (OMIM: 600876) PREDICTED: syntaxin-3  ( 279) 1106 155.6   1e-37
XP_005274252 (OMIM: 600876) PREDICTED: syntaxin-3  ( 289) 1078 152.0 1.3e-36
NP_004168 (OMIM: 600876) syntaxin-3 isoform 1 [Hom ( 289) 1078 152.0 1.3e-36
XP_016873678 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281) 1054 148.9 1.1e-35
XP_016873679 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281) 1054 148.9 1.1e-35
XP_016873677 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281) 1054 148.9 1.1e-35
XP_016873680 (OMIM: 600876) PREDICTED: syntaxin-3  ( 281) 1054 148.9 1.1e-35
NP_001171511 (OMIM: 600876) syntaxin-3 isoform 2 [ ( 277) 1025 145.1 1.4e-34
XP_016873683 (OMIM: 600876) PREDICTED: syntaxin-3  ( 269) 1001 142.0 1.2e-33
XP_005274257 (OMIM: 600876) PREDICTED: syntaxin-3  ( 252)  854 123.0 5.9e-28
XP_016874474 (OMIM: 132350) PREDICTED: syntaxin-2  ( 213)  831 119.9 4.1e-27
XP_016873684 (OMIM: 600876) PREDICTED: syntaxin-3  ( 244)  830 119.9   5e-27
XP_016874473 (OMIM: 132350) PREDICTED: syntaxin-2  ( 214)  825 119.2 7.1e-27
XP_011543523 (OMIM: 600876) PREDICTED: syntaxin-3  ( 192)  781 113.4 3.4e-25
NP_004595 (OMIM: 186591) syntaxin-4 isoform 3 [Hom ( 297)  764 111.4 2.1e-24
XP_005255578 (OMIM: 186591) PREDICTED: syntaxin-4  ( 293)  741 108.4 1.6e-23
NP_001259025 (OMIM: 186591) syntaxin-4 isoform 2 [ ( 295)  741 108.4 1.6e-23
XP_016874477 (OMIM: 132350) PREDICTED: syntaxin-2  ( 167)  651 96.6 3.5e-20
NP_001259024 (OMIM: 186591) syntaxin-4 isoform 1 [ ( 219)  648 96.3 5.5e-20
XP_016874475 (OMIM: 132350) PREDICTED: syntaxin-2  ( 200)  627 93.5 3.4e-19
XP_016874476 (OMIM: 132350) PREDICTED: syntaxin-2  ( 199)  622 92.9 5.3e-19
XP_011534520 (OMIM: 603552,605014) PREDICTED: synt ( 287)  565 85.7 1.1e-16
XP_011534519 (OMIM: 603552,605014) PREDICTED: synt ( 287)  565 85.7 1.1e-16
XP_011534516 (OMIM: 603552,605014) PREDICTED: synt ( 287)  565 85.7 1.1e-16
XP_016866889 (OMIM: 603552,605014) PREDICTED: synt ( 287)  565 85.7 1.1e-16
NP_003755 (OMIM: 603552,605014) syntaxin-11 [Homo  ( 287)  565 85.7 1.1e-16
XP_011534515 (OMIM: 603552,605014) PREDICTED: synt ( 313)  565 85.7 1.2e-16
XP_016873685 (OMIM: 600876) PREDICTED: syntaxin-3  ( 155)  557 84.4 1.5e-16
XP_011544227 (OMIM: 186591) PREDICTED: syntaxin-4  ( 154)  479 74.3 1.6e-13
XP_016874478 (OMIM: 132350) PREDICTED: syntaxin-2  ( 159)  348 57.4   2e-08
NP_803173 (OMIM: 606892) syntaxin-12 [Homo sapiens ( 276)  305 52.1 1.4e-06
NP_001313507 (OMIM: 603217) syntaxin-7 isoform a [ ( 261)  283 49.2 9.7e-06
NP_003560 (OMIM: 603217) syntaxin-7 isoform a [Hom ( 261)  283 49.2 9.7e-06
NP_001313508 (OMIM: 603217) syntaxin-7 isoform a [ ( 261)  283 49.2 9.7e-06


>>NP_443106 (OMIM: 601485,616172) syntaxin-1B [Homo sapi  (288 aa)
 initn: 1815 init1: 1815 opt: 1815  Z-score: 1293.1  bits: 247.2 E(85289): 2.8e-65
Smith-Waterman score: 1815; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)

               10        20        30        40        50        60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
              190       200       210       220       230       240

              250       260       270       280        
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_443 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
              250       260       270       280        

>>XP_016878382 (OMIM: 601485,616172) PREDICTED: syntaxin  (282 aa)
 initn: 1752 init1: 1752 opt: 1752  Z-score: 1249.2  bits: 239.0 E(85289): 7.6e-63
Smith-Waterman score: 1752; 100.0% identity (100.0% similar) in 278 aa overlap (11-288:5-282)

               10        20        30        40        50        60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
                 ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016       MEPRAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
                     10        20        30        40        50    

               70        80        90       100       110       120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
           60        70        80        90       100       110    

              130       140       150       160       170       180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
          120       130       140       150       160       170    

              190       200       210       220       230       240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
          180       190       200       210       220       230    

              250       260       270       280        
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
       ::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
          240       250       260       270       280  

>>NP_004594 (OMIM: 186590) syntaxin-1A isoform 1 [Homo s  (288 aa)
 initn: 1461 init1: 1461 opt: 1543  Z-score: 1103.2  bits: 212.0 E(85289): 1e-54
Smith-Waterman score: 1543; 84.2% identity (96.8% similar) in 285 aa overlap (1-284:1-285)

               10        20         30        40        50         
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
       :::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
NP_004 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
       :::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
NP_004 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
       :::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::.. 
NP_004 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
       : :::...::::.::::::.::::::.:::::::::.::::::::::::::::::::::.
NP_004 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHA
              190       200       210       220       230       240

     240       250       260       270       280        
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
       :::::::::::::::::::::::::::::::::.::.:.::..::    
NP_004 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA 
              250       260       270       280         

>>NP_001971 (OMIM: 132350) syntaxin-2 isoform 1 [Homo sa  (287 aa)
 initn: 1202 init1: 1202 opt: 1202  Z-score: 865.1  bits: 168.0 E(85289): 1.9e-41
Smith-Waterman score: 1202; 64.7% identity (88.5% similar) in 286 aa overlap (1-282:1-286)

               10        20        30        40        50        60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
       :.::  .: . . .:: . :: :..:::::.::.::::::. :.:... ::.:::.:: :
NP_001 MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSII
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
       :.::::. : :.:::::. .:::::::.:.::::::::..:.:. ::.:.:::::.::::
NP_001 LSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
       .:::::::.:.::: .:. .:.: : ::::::::::::::..:::.:::::: .:::.::
NP_001 VLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSDI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
         :::.:.:::::::.::..:.::::::::::.::.::::.::.:::::. :: :: ...
NP_001 ISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNAT
              190       200       210       220       230       240

              250       260       270           280        
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL----GVVLASSIGGTLGL
       ::::.:  .::::.::::::::: ..:::: .::    :..::...      
NP_001 DYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGIILATTLS     
              250       260       270       280            

>>NP_919337 (OMIM: 132350) syntaxin-2 isoform 2 [Homo sa  (288 aa)
 initn: 1239 init1: 1186 opt: 1196  Z-score: 860.9  bits: 167.2 E(85289): 3.3e-41
Smith-Waterman score: 1196; 64.8% identity (87.8% similar) in 287 aa overlap (1-287:1-287)

               10        20        30        40        50        60
pF1KB9 MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
       :.::  .: . . .:: . :: :..:::::.::.::::::. :.:... ::.:::.:: :
NP_919 MRDRLPDLTACRKNDDGDTVVVVEKDHFMDDFFHQVEEIRNSIDKITQYVEEVKKNHSII
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
       :.::::. : :.:::::. .:::::::.:.::::::::..:.:. ::.:.:::::.::::
NP_919 LSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQDESGNRTSVDLRIRRTQHS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
       .:::::::.:.::: .:. .:.: : ::::::::::::::..:::.:::::: .:::.::
NP_919 VLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSDI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
         :::.:.:::::::.::..:.::::::::::.::.::::.::.:::::. :: :: ...
NP_919 ISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNAT
              190       200       210       220       230       240

              250       260       270       280        
pF1KB9 DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
       ::::.:  .::::.:::::::::: .::   ::: ...:  :: ..: 
NP_919 DYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALIIGLSVGK
              250       260       270       280        

>>NP_001159375 (OMIM: 186590) syntaxin-1A isoform 2 [Hom  (251 aa)
 initn: 1102 init1: 1102 opt: 1184  Z-score: 853.3  bits: 165.6 E(85289): 8.7e-41
Smith-Waterman score: 1184; 82.7% identity (96.0% similar) in 226 aa overlap (1-225:1-226)

               10        20         30        40        50         
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
       :::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
NP_001 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
       :::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
NP_001 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
       :::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::.. 
NP_001 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
       : :::...::::.::::::.::::::.:::::::::.:::::::::              
NP_001 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQTMWRGPCLTPRRPS
              190       200       210       220       230       240

     240       250       260       270       280        
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
                                                        
NP_001 STRARRAGRKS                                      
              250                                       

>>XP_016868056 (OMIM: 186590) PREDICTED: syntaxin-1A iso  (329 aa)
 initn: 1102 init1: 1102 opt: 1184  Z-score: 851.8  bits: 165.7 E(85289): 1e-40
Smith-Waterman score: 1184; 82.7% identity (96.0% similar) in 226 aa overlap (1-225:1-226)

               10        20         30        40        50         
pF1KB9 MKDRTQELRSAKDSDDEEEV-VHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
       :::::::::.::::::...: : ::::.:::::::::::::: :.:..:.::.::..:::
XP_016 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
       :::.::::::::.:::.: .::::::::::::::.:::::::::::::::::::::::::
XP_016 ILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQH
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB9 STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
       :::::::::::.::::::: ::.::: ::::::::::::::.::::::::::. :::.. 
XP_016 STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASG
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB9 IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
       : :::...::::.::::::.::::::.:::::::::.:::::::::              
XP_016 IIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQVSAGPPCPPLQPTP
              190       200       210       220       230       240

     240       250       260       270       280                   
pF1KB9 VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL           
                                                                   
XP_016 APRAALTSPFLPDTLPCRGGTKFSGNQSPAVETAARALPTRRSLSSAWLCLSFKDPRPCM
              250       260       270       280       290       300

>>XP_016874469 (OMIM: 132350) PREDICTED: syntaxin-2 isof  (319 aa)
 initn: 1173 init1: 1173 opt: 1173  Z-score: 844.3  bits: 164.3 E(85289): 2.7e-40
Smith-Waterman score: 1173; 65.8% identity (89.5% similar) in 275 aa overlap (12-282:44-318)

                                  10        20        30        40 
pF1KB9                    MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
                                     . .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
            20        30        40        50        60        70   

              50        60        70        80        90       100 
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
        :.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
            80        90       100       110       120       130   

             110       120       130       140       150       160 
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
       .:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
           140       150       160       170       180       190   

             170       180       190       200       210       220 
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
       .:::.:::::: .:::.::  :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
           200       210       220       230       240       250   

             230       240       250       260       270           
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVL----GVV
       ::.:::::. :: :: ...::::.:  .::::.::::::::: ..:::: .::    :..
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKLMFIIICVIVLLVILGII
           260       270       280       290       300       310   

       280        
pF1KB9 LASSIGGTLGL
       ::...      
XP_016 LATTLS     
                  

>>XP_016874467 (OMIM: 132350) PREDICTED: syntaxin-2 isof  (320 aa)
 initn: 1217 init1: 1164 opt: 1167  Z-score: 840.1  bits: 163.5 E(85289): 4.7e-40
Smith-Waterman score: 1167; 65.9% identity (88.8% similar) in 276 aa overlap (12-287:44-319)

                                  10        20        30        40 
pF1KB9                    MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
                                     . .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
            20        30        40        50        60        70   

              50        60        70        80        90       100 
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
        :.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
            80        90       100       110       120       130   

             110       120       130       140       150       160 
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
       .:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
           140       150       160       170       180       190   

             170       180       190       200       210       220 
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
       .:::.:::::: .:::.::  :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
           200       210       220       230       240       250   

             230       240       250       260       270       280 
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASS
       ::.:::::. :: :: ...::::.:  .::::.:::::::::: .::   ::: ...:  
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALI
           260       270       280       290       300       310   

              
pF1KB9 IGGTLGL
       :: ..: 
XP_016 IGLSVGK
           320

>>XP_016874468 (OMIM: 132350) PREDICTED: syntaxin-2 isof  (320 aa)
 initn: 1217 init1: 1164 opt: 1167  Z-score: 840.1  bits: 163.5 E(85289): 4.7e-40
Smith-Waterman score: 1167; 65.9% identity (88.8% similar) in 276 aa overlap (12-287:44-319)

                                  10        20        30        40 
pF1KB9                    MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRG
                                     . .:: . :: :..:::::.::.::::::.
XP_016 SAFSGQMHTVICALKPQYSAWCLIQSTCQCRKNDDGDTVVVVEKDHFMDDFFHQVEEIRN
            20        30        40        50        60        70   

              50        60        70        80        90       100 
pF1KB9 CIEKLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQ
        :.:... ::.:::.:: ::.::::. : :.:::::. .:::::::.:.::::::::..:
XP_016 SIDKITQYVEEVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKAIEQSFDQ
            80        90       100       110       120       130   

             110       120       130       140       150       160 
pF1KB9 EEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTN
       .:. ::.:.:::::.::::.:::::::.:.::: .:. .:.: : ::::::::::::::.
XP_016 DESGNRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTD
           140       150       160       170       180       190   

             170       180       190       200       210       220 
pF1KB9 EELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAML
       .:::.:::::: .:::.::  :::.:.:::::::.::..:.::::::::::.::.::::.
XP_016 DELEEMLESGKPSIFTSDIISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMF
           200       210       220       230       240       250   

             230       240       250       260       270       280 
pF1KB9 VESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASS
       ::.:::::. :: :: ...::::.:  .::::.:::::::::: .::   ::: ...:  
XP_016 VETQGEMINNIERNVMNATDYVEHAKEETKKAIKYQSKARRKKWIIIAVSVVLVAIIALI
           260       270       280       290       300       310   

              
pF1KB9 IGGTLGL
       :: ..: 
XP_016 IGLSVGK
           320




288 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 13:18:21 2016 done: Sat Nov  5 13:18:22 2016
 Total Scan time:  7.170 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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