Result of FASTA (ccds) for pF1KB5559
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5559, 245 aa
  1>>>pF1KB5559 245 - 245 aa - 245 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0400+/-0.00105; mu= 16.0004+/- 0.062
 mean_var=67.5285+/-13.735, 0's: 0 Z-trim(103.6): 51  B-trim: 0 in 0/49
 Lambda= 0.156074
 statistics sampled from 7419 (7470) to 7419 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.229), width:  16
 Scan time:  2.060

The best scores are:                                      opt bits E(32554)
CCDS14470.1 TSPAN6 gene_id:7105|Hs108|chrX         ( 245) 1631 376.2 1.1e-104
CCDS14248.1 TSPAN7 gene_id:7102|Hs108|chrX         ( 249) 1019 238.4 3.3e-63
CCDS76001.1 TSPAN6 gene_id:7105|Hs108|chrX         ( 129)  732 173.6 5.6e-44
CCDS8890.1 CD63 gene_id:967|Hs108|chr12            ( 238)  445 109.2 2.6e-24
CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15       ( 253)  441 108.3 5.1e-24
CCDS58243.1 CD63 gene_id:967|Hs108|chr12           ( 215)  405 100.1 1.2e-21
CCDS7719.1 CD151 gene_id:977|Hs108|chr11           ( 253)  396 98.2 5.7e-21
CCDS530.1 TSPAN1 gene_id:10103|Hs108|chr1          ( 241)  363 90.7 9.5e-19
CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12        ( 239)  361 90.3 1.3e-18
CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12         ( 237)  355 88.9 3.3e-18
CCDS58242.1 CD63 gene_id:967|Hs108|chr12           ( 156)  336 84.5 4.5e-17
CCDS7294.1 TSPAN15 gene_id:23555|Hs108|chr10       ( 294)  338 85.1 5.5e-17
CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5       ( 263)  333 84.0 1.1e-16
CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5       ( 329)  333 84.1 1.3e-16
CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5       ( 332)  333 84.1 1.3e-16
CCDS7369.1 TSPAN14 gene_id:81619|Hs108|chr10       ( 270)  326 82.4 3.3e-16
CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4         ( 268)  320 81.1 8.5e-16
CCDS31765.1 TSPAN11 gene_id:441631|Hs108|chr12     ( 253)  315 79.9 1.8e-15
CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11       ( 248)  314 79.7   2e-15
CCDS7721.1 TSPAN4 gene_id:7106|Hs108|chr11         ( 238)  310 78.8 3.7e-15
CCDS53963.1 TSPAN3 gene_id:10099|Hs108|chr15       ( 189)  302 76.9 1.1e-14
CCDS5810.1 TSPAN33 gene_id:340348|Hs108|chr7       ( 283)  302 77.0 1.5e-14
CCDS12256.1 TSPAN16 gene_id:26526|Hs108|chr19      ( 245)  287 73.6 1.4e-13
CCDS7734.1 CD81 gene_id:975|Hs108|chr11            ( 236)  275 70.9 8.6e-13
CCDS829.1 CD53 gene_id:963|Hs108|chr1              ( 219)  270 69.7 1.8e-12
CCDS8540.1 CD9 gene_id:928|Hs108|chr12             ( 228)  266 68.9 3.4e-12
CCDS44949.1 TSPAN19 gene_id:144448|Hs108|chr12     ( 248)  266 68.9 3.6e-12
CCDS31469.1 CD82 gene_id:3732|Hs108|chr11          ( 242)  248 64.8 5.9e-11
CCDS77130.1 TSPAN10 gene_id:83882|Hs108|chr17      ( 393)  248 65.0 8.7e-11


>>CCDS14470.1 TSPAN6 gene_id:7105|Hs108|chrX              (245 aa)
 initn: 1631 init1: 1631 opt: 1631  Z-score: 1993.0  bits: 376.2 E(32554): 1.1e-104
Smith-Waterman score: 1631; 99.6% identity (100.0% similar) in 245 aa overlap (1-245:1-245)

               10        20        30        40        50        60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS14 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNN
              190       200       210       220       230       240

            
pF1KB5 QYEIV
       :::::
CCDS14 QYEIV
            

>>CCDS14248.1 TSPAN7 gene_id:7102|Hs108|chrX              (249 aa)
 initn: 849 init1: 643 opt: 1019  Z-score: 1248.2  bits: 238.4 E(32554): 3.3e-63
Smith-Waterman score: 1019; 58.9% identity (83.5% similar) in 248 aa overlap (5-245:3-249)

               10        20        30        40        50        60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
           :::..:::::::.:..:.::.:.::::::::::::.:::..: .:.::. :..::.
CCDS14   MASRRMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNA
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
       :.:::.:::.:...: ::::::::.: ::::::::::.::::.:::: : :::::::::.
CCDS14 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKL
       .:  .:  :.. ::.. : ::.:::..: .: :::: .: .:. . :. :.:.: :::  
CCDS14 TFLRTYTDAMQTYNGN-DERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMN
      120       130        140       150       160       170       

                     190       200       210       220       230   
pF1KB5 E-DCTPQR------DADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCL
       : ::.::        : :::..::.  : ...:..::..::..::.:  ::::..:: ::
CCDS14 ETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL
       180       190       200       210       220       230       

           240     
pF1KB5 SRAITNNQYEIV
       :: :: ::::.:
CCDS14 SRFITANQYEMV
       240         

>>CCDS76001.1 TSPAN6 gene_id:7105|Hs108|chrX              (129 aa)
 initn: 730 init1: 730 opt: 732  Z-score: 903.0  bits: 173.6 E(32554): 5.6e-44
Smith-Waterman score: 803; 81.5% identity (82.2% similar) in 157 aa overlap (89-245:1-129)

       60        70        80        90       100       110        
pF1KB5 NVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEI
                                     :::::::::::::::::::.::::::::::
CCDS76                               MLKLYAMFLTLVFLVELVAAIVGFVFRHEI
                                             10        20        30

      120       130       140       150       160       170        
pF1KB5 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
               40        50        60        70        80        90

      180       190       200       210       220       230        
pF1KB5 KLEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
       :::::::::::::::::                            :::::::::::::::
CCDS76 KLEDCTPQRDADKVNNE----------------------------LIGIFLAYCLSRAIT
              100                                   110       120  

      240     
pF1KB5 NNQYEIV
       :::::::
CCDS76 NNQYEIV
              

>>CCDS8890.1 CD63 gene_id:967|Hs108|chr12                 (238 aa)
 initn: 304 init1: 220 opt: 445  Z-score: 550.0  bits: 109.2 E(32554): 2.6e-24
Smith-Waterman score: 445; 28.6% identity (66.7% similar) in 234 aa overlap (14-245:7-238)

               10        20        30        40        50        60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
                    . : : .: .  . :   .: :.:::. ... : . .      .. .
CCDS88        MAVEGGMKCVKFLLYVLLLAFCACAVGLIAVGVGAQLVLSQTIIQGATPGSLL
                      10        20        30        40        50   

               70        80        90       100       110       120
pF1KB5 PFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIKN
       : :.::.:. ..:..  :: ..:. .  ..  .:.::.:..:::..:.:.:.::: .. .
CCDS88 PVVIIAVGVFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMS
            60        70        80        90       100       110   

              130       140       150       160       170          
pF1KB5 SFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCK-
        :.::... ...: .. .. .  .:..:  ..:::...: ::     .:..  : :::  
CCDS88 EFNNNFRQQMENYPKN-NHTASILDRMQADFKCCGAANYTDWEKIPSMSKNRVPDSCCIN
           120        130       140       150       160       170  

      180       190       200       210       220       230        
pF1KB5 -LEDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAIT
           :  . .   ...:::  :.   ..... :::. ..:.:  ...:: .: :: ..: 
CCDS88 VTVGCGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFACCLVKSIR
            180       190       200       210       220       230  

      240     
pF1KB5 NNQYEIV
       .. ::..
CCDS88 SG-YEVM
              

>>CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15            (253 aa)
 initn: 376 init1: 176 opt: 441  Z-score: 544.7  bits: 108.3 E(32554): 5.1e-24
Smith-Waterman score: 441; 32.2% identity (64.5% similar) in 242 aa overlap (14-245:6-246)

               10        20        30        40        50        60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
                    ::  :.::.. ..::: .. ::  :: .  .. ..:  ....  : .
CCDS10         MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLI
                       10        20        30        40        50  

                70        80        90       100       110         
pF1KB5 P-FVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIK
       :  :.::.:......: .:: :: : :   :  ....: :::..:.:....:.:.: ...
CCDS10 PAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVE
             60        70        80        90       100       110  

     120       130        140       150       160       170        
pF1KB5 NSFKNNYEKALKQYNSTG-DYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSE---KGFPK
       :    . .:. : ::.:. :  :.:.: .:  :::::. .: :: .:....:   .. : 
CCDS10 NEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPL
            120       130       140       150       160       170  

           180        190       200       210       220       230  
pF1KB5 SCCK--LEDCTPQ-RDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYC
       :::.    .:. .    . .  :::   :.  ..  :  :   ... : .::.:.. : :
CCDS10 SCCRETASNCNGSLAHPSDLYAEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCA-C
            180       190       200       210       220       230  

              240            
pF1KB5 --LSRAITNNQYEIV       
         : :   .  ::..       
CCDS10 IVLCRRSRDPAYELLITGGTYA
             240       250   

>>CCDS58243.1 CD63 gene_id:967|Hs108|chr12                (215 aa)
 initn: 288 init1: 204 opt: 405  Z-score: 501.9  bits: 100.1 E(32554): 1.2e-21
Smith-Waterman score: 405; 30.3% identity (69.7% similar) in 188 aa overlap (60-245:30-215)

      30        40        50        60        70        80         
pF1KB5 ITGVILLAVGIWGKVSLENYFSLLNEKATNVPFVLIATGTVIILLGTFGCFATCRASAWM
                                     .: :.::.:. ..:..  :: ..:. .  .
CCDS58  MAVEGGMKCVKFLLYVLLLAFCGATPGSLLPVVIIAVGVFLFLVAFVGCCGACKENYCL
                10        20        30        40        50         

      90       100       110       120       130       140         
pF1KB5 LKLYAMFLTLVFLVELVATIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAVDKIQN
       .  .:.::.:..:::..:.:.:.::: .. . :.::... ...:   ... .  .:..: 
CCDS58 MITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEFNNNFRQQMENY-PKNNHTASILDRMQA
      60        70        80        90       100        110        

     150       160       170         180       190       200       
pF1KB5 TLHCCGVTDYRDWTDTNYYSEKGFPKSCCK--LEDCTPQRDADKVNNEGCFIKVMTIIES
        ..:::...: ::     .:..  : :::      :  . .   ...:::  :.   ...
CCDS58 DFKCCGAANYTDWEKIPSMSKNRVPDSCCINVTVGCGINFNEKAIHKEGCVEKIGGWLRK
      120       130       140       150       160       170        

       210       220       230       240     
pF1KB5 EMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQYEIV
       .. :::. ..:.:  ...:: .: :: ..: .. ::..
CCDS58 NVLVVAAAALGIAFVEVLGIVFACCLVKSIRSG-YEVM
      180       190       200       210      

>>CCDS7719.1 CD151 gene_id:977|Hs108|chr11                (253 aa)
 initn: 484 init1: 152 opt: 396  Z-score: 490.0  bits: 98.2 E(32554): 5.7e-21
Smith-Waterman score: 500; 32.1% identity (70.8% similar) in 240 aa overlap (16-242:15-253)

               10        20        30        40        50          
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKA-TN
                      :.: .:. :.  ::..:. ..:::::  .   .:.:::   .   
CCDS77  MGEFNEKKTTCGTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLA
                10        20        30        40        50         

      60        70        80        90       100       110         
pF1KB5 VPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIK
       . ..:...:::... :..:: :: .    .:.:: ..: ..::.:..: :..... ....
CCDS77 TAYILVVAGTVVMVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLN
      60        70        80        90       100       110         

     120       130         140       150       160         170     
pF1KB5 NSFKNNYEKAL-KQYNSTG-DYRSHAVDKIQNTLHCCGVTDYRDWTDTNYY--SEKG---
       . .:.: . .. :.:.. : .  . :::..:. .:::: .. .:: :...   .: :   
CCDS77 TELKENLKDTMTKRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRV
     120       130       140       150       160       170         

              180        190         200       210       220       
pF1KB5 FPKSCCK--LEDCTPQRD-ADKVNNE--GCFIKVMTIIESEMGVVAGISFGVACFQLIGI
        : ::::  .  :  ::: :... .   ::. :. :.:. .. :......:.:: :..:.
CCDS77 VPDSCCKTVVALCG-QRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM
     180       190        200       210       220       230        

       230       240     
pF1KB5 FLAYCLSRAITNNQYEIV
       ... :: :..  ..:   
CCDS77 IFTCCLYRSLKLEHY   
      240       250      

>>CCDS530.1 TSPAN1 gene_id:10103|Hs108|chr1               (241 aa)
 initn: 309 init1: 202 opt: 363  Z-score: 450.1  bits: 90.7 E(32554): 9.5e-19
Smith-Waterman score: 372; 29.2% identity (65.8% similar) in 240 aa overlap (14-232:1-238)

               10           20        30        40           50    
pF1KB5 MASPSRRLQTKPVITCF---KSVLLIYTFIFWITGVILLAVGIWGKV---SLENYFSLLN
                    . ::   :............ :. ::::::: ..   :. . :. :.
CCDS53              MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSIDGASFLKIFGPLS
                            10        20        30        40       

              60        70        80        90       100       110 
pF1KB5 EKA---TNVPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVG
        .:   .:: . :::.:.:.. :: .::...   :   :  . ..: :.:..:..:..:.
CCDS53 SSAMQFVNVGYFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVA
        50        60        70        80        90       100       

             120       130        140       150       160       170
pF1KB5 FVFRHEIKNSFKNNYEKALKQ-YNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSE
       .:.    .. .      :.:. :.:  :. ... .  .. :.::: :.: :. :. :..:
CCDS53 LVYTTMAEHFLTLLVVPAIKKDYGSQEDF-TQVWNTTMKGLKCCGFTNYTDFEDSPYFKE
       110       120       130        140       150       160      

               180              190       200       210       220  
pF1KB5 KG-FPKSCCKL-------EDCTPQRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACF
       .. ::  ::.        : :: :.  :. . :::: ...  :...  .:.:.. :.. .
CCDS53 NSAFPPFCCNDNVTNTANETCTKQKAHDQ-KVEGCFNQLLYDIRTNAVTVGGVAAGIGGL
        170       180       190        200       210       220     

            230          240     
pF1KB5 QLIGIFLA---YCLSRAITNNQYEIV
       .: .....   ::             
CCDS53 ELAAMIVSMYLYCNLQ          
         230       240           

>>CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12             (239 aa)
 initn: 316 init1: 129 opt: 361  Z-score: 447.7  bits: 90.3 E(32554): 1.3e-18
Smith-Waterman score: 361; 26.4% identity (64.7% similar) in 235 aa overlap (14-243:6-238)

               10        20        30        40        50          
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLL-NEKATN
                    . :.: .......:::. :  ::.:::: .::  :. ..  .  . .
CCDS85         MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLS
                       10        20        30        40        50  

      60        70        80        90       100       110         
pF1KB5 VPFVLIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRHEIK
       .  ..:: ::.... : .::... . .  .:  . . : ...:.::.  :. ::.  ...
CCDS85 AANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVN
             60        70        80        90       100       110  

     120       130       140        150       160       170        
pF1KB5 NSFKNNYEKALKQYNSTGDYR-SHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCC
       .. :.. ...:  :.. ..   ..: . ::  ..::::::: ::  .   .:.  :  ::
CCDS85 ENAKKDLKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPV--LGENTVPDRCC
            120       130       140       150         160       170

      180       190        200       210       220       230       
pF1KB5 KLEDCTPQRDADK-VNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAI
         ..    :.:   .   ::. ::   ....  :.. ... .  .:..:. ... : . :
CCDS85 MENSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHI
              180       190       200       210       220       230

         240     
pF1KB5 --TNNQYEIV
         :...:.  
CCDS85 HRTGKKYDA 
                 

>>CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12              (237 aa)
 initn: 302 init1: 133 opt: 355  Z-score: 440.5  bits: 88.9 E(32554): 3.3e-18
Smith-Waterman score: 355; 27.4% identity (63.7% similar) in 237 aa overlap (13-239:4-236)

               10        20        30        40        50        60
pF1KB5 MASPSRRLQTKPVITCFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNV
                   : .:.:  .. ..:.::. :...::..:: .:: ..   . .: . . 
CCDS89          MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGSS
                        10        20        30        40        50 

                   70        80        90       100       110      
pF1KB5 PFV----LIATGTVIILLGTFGCFATCRASAWMLKLYAMFLTLVFLVELVATIVGFVFRH
        .:    :::.:..:..:: .:: .. . :  :: :. . : :..:..... :.: ::. 
CCDS89 SYVAVDILIAVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKS
              60        70        80        90       100       110 

        120       130       140          150        160       170  
pF1KB5 EIKNSFKNNYEKALKQYNSTGDYRSH---AVDKIQNTLHCCG-VTDYRDWTDTNYYSEKG
       .     ...  .  :  ..::. ...   :.  .:. ..::: :.   :: . :.   . 
CCDS89 KSDRIVNETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGN-NF---QH
             120       130       140       150       160           

            180         190       200       210       220       230
pF1KB5 FPKSCCKLEDCTP--QRDADKVNNEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLA
       .:. :  :.   :  . .. .: .: :.  .  .. ... .: :::::.: ....:. ..
CCDS89 YPELCACLDKQRPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFS
       170       180       190       200       210       220       

              240     
pF1KB5 YCLSRAITNNQYEIV
       . :   : :      
CCDS89 MVLYCQIGNK     
       230            




245 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 13:07:19 2016 done: Sat Nov  5 13:07:20 2016
 Total Scan time:  2.060 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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