GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:06:19

Sequence gi568815575r:38049714_38278346 : 228633 bp : 39.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4500   4709  210  0  0  123   77   151 0.439  14.61
 1.02 Intr +  22334  22449  116  2  2   54   91    89 0.583   4.97
 1.03 Intr +  23877  23985  109  1  1  -10   78   122 0.938  -0.18
 1.04 Intr +  26854  26988  135  1  0   47  110    85 0.599   5.36
 1.05 Intr +  39733  39874  142  1  1   58   89   148 0.963  11.33
 1.06 Intr +  44582  44711  130  1  1   17   94   107 0.765   3.55
 1.07 Intr +  46421  46521  101  0  2  109  115    40 0.989   7.71
 1.08 Intr +  52629  52721   93  2  0  127   67   104 0.998  11.44
 1.09 Intr +  56880  57058  179  2  2   68   59   107 0.913   3.60
 1.10 Intr +  58887  58986  100  0  1   60   94    95 0.985   6.49
 1.11 Intr +  60608  60769  162  1  0   58   97   132 0.969  10.35
 1.12 Intr +  70645  70753  109  0  1   92   75   120 0.984  10.04
 1.13 Intr +  72367  72502  136  2  1   53   45    68 0.942  -2.29
 1.14 Intr +  75585  75793  209  0  2  103   65   125 0.967   9.50
 1.15 Intr +  76875  77006  132  1  0  125   25   119 0.409   9.00
 1.16 Intr +  98913  99164  252  1  0   71   74   169 0.283  10.28
 1.17 Term +  99363  99415   53  1  2   84   49    42 0.220  -3.49
 1.18 PlyA +  99652  99657    6                               1.05

 2.10 PlyA -  99817  99812    6                              -0.45
 2.09 Term - 100181  99998  184  1  1  110   44   207 0.939  14.53
 2.08 Intr - 104870 104749  122  2  2   78   91   108 0.787   8.47
 2.07 Intr - 107316 107159  158  1  2   64  100   173 0.508  14.91
 2.06 Intr - 110483 110304  180  0  0   88   96   208 0.949  20.52
 2.05 Intr - 111341 111220  122  1  2   62   94    81 0.811   5.32
 2.04 Intr - 115182 115056  127  1  1   73   80   168 0.914  13.32
 2.03 Intr - 122344 122168  177  2  0   86   86   220 0.640  20.57
 2.02 Intr - 124638 124447  192  1  0   81   92   201 0.989  18.34
 2.01 Init - 127770 127623  148  0  1   95   69    18 0.279   0.90
 2.00 Prom - 134189 134150   40                              -5.45

 3.04 PlyA - 134528 134523    6                               1.05
 3.03 Term - 143215 143046  170  2  2   63   50   135 0.005   4.26
 3.02 Intr - 160928 160807  122  1  2   55   76    79 0.100   2.62
 3.01 Init - 171079 170895  185  1  2   98   40   329 0.733  25.74
 3.00 Prom - 172590 172551   40                              -9.25

 4.00 Prom + 174185 174224   40                              -4.55
 4.01 Init + 174446 174457   12  1  0   73   94     4 0.562  -0.31
 4.02 Intr + 175771 175860   90  0  0   88   42    96 0.752   4.27
 4.03 Term + 178160 178273  114  1  0   63   37   130 0.581   2.99
 4.04 PlyA + 179456 179461    6                               1.05

 5.04 PlyA - 182315 182310    6                               1.05
 5.03 Term - 189338 189250   89  0  2   91   49    77 0.484   0.94
 5.02 Intr - 189706 189573  134  0  2   60   96    55 0.168   2.87
 5.01 Init - 210403 210336   68  1  2   71   90    63 0.204   5.40
 5.00 Prom - 219323 219284   40                              -5.05

 6.04 PlyA - 219435 219430    6                               1.05
 6.03 Term - 220119 219913  207  0  0   71   36    93 0.379  -1.24
 6.02 Intr - 223798 223673  126  1  0   47  115   109 0.621   9.46
 6.01 Intr - 227059 226874  186  1  0   78   86   285 0.999  26.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_1|789_aa
XKLKNELLEAKRRSGKTQQEASRVCVHCHRNLGLIFDRGDPCQACSLRVCRECRVAGPNG
SWKCTVCDKIAQLRIITGEWFFEEKAKRFKQVNVLGTDVVRQSILRRSPGAEEVQSQEQT
RQDAEKSDTSPVAGKKASHDGPKRKGFLLSKFRSATRGEIITPKTDTGRSYSLDLDGQHF
RSLKSPPGSDRGSTGSSDLNDQEPGPRTPKSSRSNGVTPGTQSSPAPSTRTVTSVISREY
GFENSMDLAAIEGTSQELTKSHRRNTSGTPSIAVSGTSLSSDQSRSELDLSESFTEDSED
TVSIRSKSVPGALDKDSLEETEESIDALVSSQLSTNTHRLASGLSTTSLNSMMSVYSETG
DYGNVKVSGEILLHISYCYKTGGLYIFVKNCRNLAIGDEKKQRTDAYVKSYLLPDKSRNN
KRKTKIRTGTNPEFNETLKYTISHTQLETRTLQLSVWHYDRFGRNSFLGEVEIPFDSWNF
ENPTDEWFVLQPKVEFAPDIGLQYKGELTVVLRYIPPEENLMLPPEQLQGNKTFKKGKKK
ESPVISGGILEVFIKEAKNLTAVKSGGTSDSFVKGYLLPDDSKATKHKTLVIKKSVNPQW
NHTFMFSGIHPQDIKNVCLELTIWDKEAFSSNIFLGGVRLNSGSGVSHGKNVDWMDSQGE
EQRLWQKMANNPGTPFEGVLMLRSSMGKCLIIGDDEDFTWQASLGKLPSTHQTWCTASVW
QSLWGVAVKDSDPLANHALSHIYIPSPVPSFLGPLSEALGKRSSGSSAEILWGENGRVKL
MLPLVLDCD

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_1|2370_bp
nngaagctgaaaaatgaactcttagaagcaaaacgtagaagtgggaaaactcaacaagag
gccagcagagtttgtgttcactgtcacagaaacctgggcctaatctttgaccggggagac
ccttgtcaggcttgctcactgagggtatgcagggagtgtcgagttgcaggccccaatggc
agctggaagtgcactgtctgtgacaaaatcgcgcagctaaggattataactggtgagtgg
ttttttgaagaaaaggcaaaacgtttcaagcaagtcaatgttctcggcactgatgttgtc
cgacagtccattttaagaagaagtccaggagctgaagaagtacagagccaagagcaaacc
cgccaggatgcagaaaagtcagacacttcacctgttgctgggaagaaggccagccatgat
gggcccaagagaaagggatttcttcttagcaagttcagatcggcaaccagaggagaaatc
ataactcccaaaactgacactgggcggagctatagcttggacttagacggtcaacatttt
cggagtttaaaatcacctcctggttcagacaggggaagcactggctcatcagatctcaat
gaccaggaacctggtcctaggaccccgaagagcagtcggagcaatggtgtgaccccaggc
actcagagttcaccagccccaagcacacgaactgtgacctcagtcatcagtagagagtat
ggttttgaaaattccatggatttggctgctattgaaggtacctctcaggagctcacaaag
agtcaccgcagaaacacttctggcacaccttccatagcagtgtctggaacctctctctcc
tcagatcagagtcgatctgagttagatttgagtgagtcatttacagaagactcagaggat
actgtaagcataagaagcaagtctgtccctggggctttagacaaggactccttggaagag
actgaagaaagcattgatgccttagtgtcctcgcagttatctacaaacactcaccgtctg
gcaagtggcctatcaactaccagccttaacagcatgatgagcgtttacagtgaaacggga
gactatggcaacgtgaaagtcagtggtgaaatccttctccatatcagctactgctacaaa
actggtgggctgtacatttttgtcaagaattgcagaaatctggccataggagatgaaaag
aaacagaggacagatgcttatgtcaagtcatatcttcttcctgacaagtcccggaacaac
aagcgtaagaccaaaatcagaacaggcaccaatccagaattcaatgaaacactaaagtac
actatcagccatacccagctggaaacaagaactctgcagctctcagtctggcactatgat
cgatttggacgtaatagcttcctcggggaagtagagattccttttgactcatggaacttt
gaaaatccaactgatgagtggtttgtgcttcaacccaaggtggagtttgctcctgatatt
ggccttcaatacaaaggagagctgacagttgttttacgttacattcccccagaagagaac
ctgatgcttccaccagaacaactccaaggaaataagacttttaaaaagggaaagaagaag
gagtcacctgtaatctctggaggaatactagaagtgttcatcaaagaggcaaagaatttg
acagcagtgaagtcaggaggcacttctgatagctttgtgaagggctacctgctccctgat
gatagcaaagccaccaagcacaaaactctggtaataaaaaagagtgttaaccctcagtgg
aatcatacattcatgttcagtggcatccatccccaggatataaagaatgtttgcctagaa
cttactatctgggacaaggaggccttttccagcaacatctttctgggaggagttcgtttg
aattctggaagtggtgtgagccatgggaagaacgtggattggatggactctcagggggaa
gagcagcgcctttggcagaagatggccaacaaccctggaactccctttgagggtgtactc
atgcttcgttccagcatgggaaaatgcctgatcataggcgatgacgaagactttacctgg
caggcttcactgggaaagctgccctccacacaccagacttggtgcacagccagcgtatgg
cagtctctgtggggtgttgcagtcaaagactcagaccccctggccaatcatgctctttca
catatttacattcctagccctgtgccttcatttctaggccctttatctgaggccttgggc
aagaggtcttcaggttcctctgctgagatcttatggggggaaaatggaagagtgaagttg
atgcttcctctggttttagactgtgactga

>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_2|469_aa
MALVCCDVSQIQENQGRTGQLLTGDVLQLFSTQVNNISNIMTGAWCLCADTPWCSPIKVK
YGDVYCRAPQGGYYKTALGTRCDIRCQKGYELHGSSLLICQSNKRWSDKVICKQKRCPTL
AMPANGGFKCVDGAYFNSRCEYYCSPGYTLKGERTVTCMDNKAWSGRPASCVDMEPPRIK
CPSVKERIAEPNKLTVRVSWETPEGRDTADGILTDVILKGLPPGSNFPEGDHKIQYTVYD
RAENKGTCKFRVKVRVKRCGKLNAPENGYMKCSSDGDNYGATCEFSCIGGYELQGSPARV
CQSNLAWSGTEPTCAAMNVNVGVRTAAALLDQFYEKRRLLIVSTPTARNLLYRLQLGMLQ
VSPRGRAKQAQCGLDLRHITVVELVGVFPTLIGRIGAKIMPPALALQLRLLLRIPLYSFS
MVLVDKHGMDKERYVSLVMPVALFNLIDTFPLRKEEMVLQAEMSQTCNT

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_2|1410_bp
atggcccttgtttgttgtgatgtgtctcagatacaggagaatcagggtaggactggacaa
cttttgactggagatgtccttcagttgttttctacacaagtgaacaatatttccaatata
atgactggtgcctggtgcttatgtgcagataccccgtggtgctcccccatcaaggtgaag
tatggggatgtgtactgcagggcccctcaaggaggatactacaaaacagccctgggaacc
aggtgcgacattcgctgccagaagggctacgagctgcatggctcttccctactgatctgc
cagtcaaacaaacgatggtctgacaaggtcatctgcaaacaaaagcgatgtcctaccctt
gccatgccagcaaatggagggtttaagtgtgtagatggtgcctactttaactcccggtgt
gagtattattgttcaccaggatacacgttgaaaggggagcggaccgtcacatgtatggac
aacaaggcctggagcggccggccagcctcctgtgtggatatggaacctcctagaatcaag
tgcccaagtgtgaaggaacgcattgcagaacccaacaaactgacagtccgggtgtcctgg
gagacacccgaaggaagagacacagcagatggaattcttactgatgtcattctaaaaggc
ctccccccaggctccaactttccagaaggagaccacaagatccagtacacagtctatgac
agagctgagaataagggcacttgcaaatttcgagttaaagtaagagtcaaacgctgtggc
aaactcaatgccccagagaatggttacatgaagtgctccagcgacggtgataattatgga
gccacctgtgagttctcctgcatcggcggctatgagctccagggtagccctgcccgagta
tgtcaatccaacctggcttggtctggcacggagcccacctgtgcagccatgaacgtcaat
gtgggtgtcagaacggcagctgcacttctggatcagttttatgagaaaaggagactcctc
attgtgtccacacccacagcccgaaacctcctttaccggctccagctaggaatgctgcag
gtgagtcctcgaggcagggccaagcaagcacagtgtggccttgatcttcgacacatcacc
gtggtggagctggtgggtgtgttcccgactctcattggcaggataggagcaaagattatg
cctccagccctagcgctgcagctcaggctgttgctgcgaatcccactctactccttcagt
atggtgctagtggataagcatggcatggacaaagagcgctatgtctccctggtgatgcct
gtggccctgttcaacctgattgacacttttcccttgagaaaagaagagatggtcctacaa
gccgaaatgagccagacctgtaacacctga

>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_3|158_aa
MGSPAHRPALLLLLPPLLLLLLLRVPPSRSFPGRIGGVAASSAGHQRPPESPLGPFARDR
GRIQCPNLRLEVDWLLLPADIFLNASWISRQQSPDVLPCQDLGCWKIAQKDSIFGKVPFR
AHTAFFTGPWFLRTALIAANEDFTSPSSPFPADSLPWS

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_3|477_bp
atggggagccccgcacatcggcccgcgctgctgctgctgctgccgcctctgctgctgctg
ctgctgctgcgcgtcccgcccagccgcagcttcccaggtaggatcggaggcgtggctgcc
tcctcagctgggcaccaaagacccccggagtcgccgttgggacccttcgctcgggataga
gggaggatccagtgtcctaatctgaggctggaggtggactggcttttgctacctgctgac
atatttcttaatgcttcctggatttctagacagcagtctccagatgtgctgccctgccag
gatcttggatgctggaaaattgctcagaaagactcaatttttggcaaagttccctttagg
gcacatactgcctttttcactggcccatggtttctgagaactgccctcatcgctgcaaat
gaggacttcaccagcccctccagtcccttccctgcagacagcctgccttggtcctag

>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_4|71_aa
MRVEPSQAVAGKGIPKNGFLDLQQERVKRKSQSTRTEFSGQIATIIIWKDKEVQRVTVKL
CLPGAEDMLEP

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_4|216_bp
atgagggtagagccctctcaagctgttgccggaaaagggatccccaagaatgggttcttg
gatcttcagcaggaaagagttaaaaggaagtcgcagagtacaagaactgagttttcaggg
caaattgccaccatcatcatctggaaagacaaagaagtccagagagtcacagtcaagctc
tgcttacctggagcagaagacatgctggaaccataa

>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_5|96_aa
MAYLKEHYEDITDFSTETVKAKSLIVCCLKYPSLARMLGVQVREKPNSTDANSNNIFTTY
MKESRTPGLKDLFSQLLEVFLAESLQLSVLFGNALY

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_5|291_bp
atggcatatttaaaggaacactatgaagacataactgacttctcaacagaaactgtgaaa
gccaaaagccttatcgtctgttgcctgaagtatccatccttggctaggatgcttggggtt
caagtaagagaaaagcctaactcaactgatgcaaacagtaacaacatttttaccacctat
atgaaggagtccagaaccccaggattgaaggacctattctctcagctgctggaggtgttt
ttagcagagagcctgcagctgtcagtcctttttggaaatgccctttactga

>gi568815575r:38049714_38278346|GENSCAN_predicted_peptide_6|172_aa
DHEFSKTEELKLEDVDEEINAENVESKKKTVGDDESVPTGYHSKTEGAERTNDDSSAETI
EKLKLVFLNDPIVGYMLDDADSSSLEILENSETTPSKDMKKTKKIFLFKRVPSINQKIVK
NNNEPLPEIKSIGDQIILKSDNKDADQNHMSQNHQNIPPTNTERRSKSCTIL

>gi568815575r:38049714_38278346|GENSCAN_predicted_CDS_6|519_bp
gatcatgaattttctaaaactgaggaactaaaactagaagatgtggatgaggaaattaat
gctgaaaatgtggaaagcaagaagaaaactgtgggagatgatgaaagtgttcctacaggt
tatcacagtaaaacagaaggagcagaaagaaccaatgatgatagctcagctgaaactatt
gaaaagttaaaactagtatttctgaatgatccaattgtaggatacatgcttgatgatgca
gatagcagttcattagaaatcctagaaaacagtgaaacaacaccaagcaaagacatgaaa
aaaacaaagaagatttttctgttcaaaagagtcccctcaataaatcaaaagattgtcaag
aataacaatgagccgctcccagagataaaatccataggagaccagatcattttaaaaagt
gataataaagatgccgaccagaaccacatgagtcagaatcatcagaatatcccaccaaca
aatacagagagaagatcaaaatcctgtacaatactataa